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/*
* prefs.c
*
* Functions related to run-time configurations.
*
*%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
*
* This file part of: PSFEx
*
* Copyright: (C) 1997-2014 Emmanuel Bertin -- IAP/CNRS/UPMC
*
* License: GNU General Public License
*
* PSFEx is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
* PSFEx is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
* You should have received a copy of the GNU General Public License
* along with PSFEx. If not, see <http://www.gnu.org/licenses/>.
*
* Last modified: 26/02/2014
*
*%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%*/
#ifdef HAVE_CONFIG_H
#include "config.h"
#endif
#include <ctype.h>
#include <math.h>
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <unistd.h>
#if defined(USE_THREADS) \
&& (defined(__APPLE__) || defined(FREEBSD) || defined(NETBSD)) /* BSD, Apple */
#include <sys/types.h>
#include <sys/sysctl.h>
#elif defined(USE_THREADS) && defined(HAVE_MPCTL) /* HP/UX */
#include <sys/mpctl.h>
#endif
#ifdef HAVE_MKL
#include MKL_H
#endif
#include "define.h"
#include "types.h"
#include "globals.h"
#include "fits/fitscat.h"
#include "prefs.h"
#include "preflist.h"
prefstruct prefs;
/********************************* dumpprefs ********************************/
/*
Print the default preference parameters.
*/
void dumpprefs(int state)
{
char **dp;
dp = default_prefs;
while (**dp)
if (**dp != '*')
printf("%s\n",*(dp++));
else if (state)
printf("%s\n",*(dp++)+1);
else
dp++;
return;
}
/********************************* readprefs ********************************/
/*
Read a configuration file in ``standard'' format (see the SExtractor
documentation)
*/
void readprefs(char *filename, char **argkey, char **argval, int narg)
{
FILE *infile;
char str[MAXCHARL], errstr[MAXCHAR],
*cp, *keyword, *value, **dp;
int i, ival, nkey, warn, argi, flagc, flagd, flage, flagz;
double dval;
#ifdef HAVE_GETENV
static char value2[MAXCHARL],envname[MAXCHAR];
char *dolpos, *listbuf;
#endif
if ((infile = fopen(filename,"r")) == NULL)
{
flage = 1;
warning(filename, " not found, using internal defaults");
}
else
flage = 0;
/*Build the keyword-list from pkeystruct-array */
for (i=0; key[i].name[0]; i++)
strcpy(keylist[i], key[i].name);
keylist[i][0] = '\0';
/*Scan the configuration file*/
argi=0;
flagc = 0;
flagd = 1;
dp = default_prefs;
for (warn=0;;)
{
if (flagd)
{
if (**dp)
{
if (**dp=='*')
strcpy(str, *(dp++)+1);
else
strcpy(str, *(dp++));
}
else
flagd = 0;
}
if (!flagc && !flagd)
if (flage || !fgets(str, MAXCHARL, infile))
flagc=1;
if (flagc)
{
if (argi<narg)
{
sprintf(str, "%s %s", argkey[argi], argval[argi]);
argi++;
}
else
break;
}
keyword = strtok(str, notokstr);
if (keyword && keyword[0]!=0 && keyword[0]!=(char)'#')
{
if (warn>=10)
error(EXIT_FAILURE, "*Error*: No valid keyword found in ", filename);
nkey = findkeys(keyword, keylist, FIND_STRICT);
if (nkey!=RETURN_ERROR)
{
value = strtok((char *)NULL, notokstr);
#ifdef HAVE_GETENV
/*------ Expansion of environment variables (preceded by '$') */
if (value && (dolpos=strchr(value, '$')))
{
int nc;
char *valuet,*value2t, *envval;
value2t = value2;
valuet = value;
while (dolpos)
{
while (valuet<dolpos)
*(value2t++) = *(valuet++); /* verbatim copy before '$' */
if (*(++valuet) == (char)'{')
valuet++;
strncpy(envname, valuet, nc=strcspn(valuet,"}/:\"\'\\"));
*(envname+nc) = (char)'\0';
if (*(valuet+=nc) == (char)'}')
valuet++;
if (!(envval=getenv(envname)))
error(EXIT_FAILURE, "Environment variable not found: ",
envname);
while(*envval) /* Copy the ENV content */
*(value2t++) = *(envval++);
while(*valuet && *valuet!=(char)'$')/* Continue verbatim copy */
*(value2t++) = *(valuet++);
if (*valuet)
dolpos = valuet;
else
{
dolpos = NULL;
*value2t = (char)'\0';
}
}
value = strtok(value2, notokstr);
}
#endif
switch(key[nkey].type)
{
case P_FLOAT:
if (!value || value[0]==(char)'#')
error(EXIT_FAILURE, keyword," keyword has no value!");
if (*value=='@')
value = listbuf = list_to_str(value+1);
dval = atof(value);
if (dval>=key[nkey].dmin && dval<=key[nkey].dmax)
*(double *)(key[nkey].ptr) = dval;
else
error(EXIT_FAILURE, keyword," keyword out of range");
break;
case P_INT:
if (!value || value[0]==(char)'#')
error(EXIT_FAILURE, keyword," keyword has no value!");
if (*value=='@')
value = listbuf = list_to_str(value+1);
ival = (int)strtol(value, (char **)NULL, 0);
if (ival>=key[nkey].imin && ival<=key[nkey].imax)
*(int *)(key[nkey].ptr) = ival;
else
error(EXIT_FAILURE, keyword, " keyword out of range");
break;
case P_STRING:
if (!value || value[0]==(char)'#')
value = "";
if (*value=='@')
value = listbuf = list_to_str(value+1);
strcpy((char *)key[nkey].ptr, value);
break;
case P_BOOL:
if (!value || value[0]==(char)'#')
error(EXIT_FAILURE, keyword," keyword has no value!");
if (*value=='@')
value = listbuf = list_to_str(value+1);
if ((cp = strchr("yYnN", (int)value[0])))
*(int *)(key[nkey].ptr) = (tolower((int)*cp)=='y')?1:0;
else
error(EXIT_FAILURE, keyword, " value must be Y or N");
break;
case P_KEY:
if (!value || value[0]==(char)'#')
error(EXIT_FAILURE, keyword," keyword has no value!");
if (*value=='@')
value = listbuf = list_to_str(value+1);
if ((ival = findkeys(value, key[nkey].keylist,FIND_STRICT))
!= RETURN_ERROR)
*(int *)(key[nkey].ptr) = ival;
else
{
sprintf(errstr, "*Error*: %s set to an unknown keyword: ",
keyword);
error(EXIT_FAILURE, errstr, value);
}
break;
case P_BOOLLIST:
if (value && *value=='@')
value = strtok(listbuf = list_to_str(value+1), notokstr);
for (i=0; i<MAXLIST&&value&&value[0]!=(char)'#'; i++)
{
if (i>=key[nkey].nlistmax)
error(EXIT_FAILURE, keyword, " has too many members");
if ((cp = strchr("yYnN", (int)value[0])))
((int *)(key[nkey].ptr))[i] = (tolower((int)*cp)=='y')?1:0;
else
error(EXIT_FAILURE, keyword, " value must be Y or N");
value = strtok((char *)NULL, notokstr);
}
if (i<key[nkey].nlistmin)
error(EXIT_FAILURE, keyword, " list has not enough members");
*(key[nkey].nlistptr) = i;
break;
case P_INTLIST:
if (value && *value=='@')
value = strtok(listbuf = list_to_str(value+1), notokstr);
for (i=0; i<MAXLIST&&value&&value[0]!=(char)'#'; i++)
{
if (i>=key[nkey].nlistmax)
error(EXIT_FAILURE, keyword, " has too many members");
ival = strtol(value, (char **)NULL, 0);
if (ival>=key[nkey].imin && ival<=key[nkey].imax)
((int *)key[nkey].ptr)[i] = ival;
else
error(EXIT_FAILURE, keyword, " keyword out of range");
value = strtok((char *)NULL, notokstr);
}
if (i<key[nkey].nlistmin)
error(EXIT_FAILURE, keyword, " list has not enough members");
*(key[nkey].nlistptr) = i;
break;
case P_FLOATLIST:
if (value && *value=='@')
value = strtok(listbuf = list_to_str(value+1), notokstr);
for (i=0; i<MAXLIST&&value&&value[0]!=(char)'#'; i++)
{
if (i>=key[nkey].nlistmax)
error(EXIT_FAILURE, keyword, " has too many members");
dval = atof(value);
if (dval>=key[nkey].dmin && dval<=key[nkey].dmax)
((double *)key[nkey].ptr)[i] = dval;
else
error(EXIT_FAILURE, keyword, " keyword out of range");
value = strtok((char *)NULL, notokstr);
}
if (i<key[nkey].nlistmin)
error(EXIT_FAILURE, keyword, " list has not enough members");
*(key[nkey].nlistptr) = i;
break;
case P_KEYLIST:
if (value && *value=='@')
value = strtok(listbuf = list_to_str(value+1), notokstr);
for (i=0; i<MAXLIST && value && value[0]!=(char)'#'; i++)
{
if (i>=key[nkey].nlistmax)
error(EXIT_FAILURE, keyword, " has too many members");
if ((ival = findkeys(value, key[nkey].keylist, FIND_STRICT))
!= RETURN_ERROR)
((int *)(key[nkey].ptr))[i] = ival;
else
{
sprintf(errstr, "*Error*: %s set to an unknown keyword: ",
keyword);
error(EXIT_FAILURE, errstr, value);
}
value = strtok((char *)NULL, notokstr);
}
if (i<key[nkey].nlistmin)
error(EXIT_FAILURE, keyword, " list has not enough members");
*(key[nkey].nlistptr) = i;
break;
case P_STRINGLIST:
if (value && *value=='@')
value = strtok(listbuf = list_to_str(value+1), notokstr);
if (!value || value[0]==(char)'#')
{
value = "";
flagz = 1;
}
else
flagz = 0;
for (i=0; i<MAXLIST && value && value[0]!=(char)'#'; i++)
{
if (i>=key[nkey].nlistmax)
error(EXIT_FAILURE, keyword, " has too many members");
free(((char **)key[nkey].ptr)[i]);
QMALLOC(((char **)key[nkey].ptr)[i], char, MAXCHAR);
strcpy(((char **)key[nkey].ptr)[i], value);
value = strtok((char *)NULL, notokstr);
}
if (i<key[nkey].nlistmin)
error(EXIT_FAILURE, keyword, " list has not enough members");
*(key[nkey].nlistptr) = flagz?0:i;
break;
default:
error(EXIT_FAILURE, "*Internal ERROR*: Type Unknown",
" in readprefs()");
break;
}
key[nkey].flag = 1;
}
else
{
warning(keyword, " keyword unknown");
warn++;
}
}
}
for (i=0; key[i].name[0]; i++)
if (!key[i].flag)
error(EXIT_FAILURE, key[i].name, " configuration keyword missing");
if (!flage)
fclose(infile);
return;
}
/********************************** findkeys **********************************/
/*
find an item within a list of keywords, SExtractor version.
*/
int findkeys(char *str, char keyw[][32], int mode)
{
int i;
for (i=0; keyw[i][0]; i++)
if (!cistrcmp(str, keyw[i], mode))
return i;
return RETURN_ERROR;
}
/******************************* cistrcmp ***********************************/
/*
case-insensitive strcmp.
*/
int cistrcmp(char *cs, char *ct, int mode)
{
int i, diff;
if (mode)
{
for (i=0; cs[i]&&ct[i]; i++)
if ((diff=tolower((int)cs[i])-tolower((int)ct[i])))
return diff;
}
else
{
for (i=0; cs[i]||ct[i]; i++)
if ((diff=tolower((int)cs[i])-tolower((int)ct[i])))
return diff;
}
return 0;
}
/****** list_to_str **********************************************************
PROTO char *list_to_str(char *listname)
PURPOSE Read the content of a file and convert it to a long string.
INPUT File name.
OUTPUT Pointer to an allocated string, or NULL if something went wrong.
NOTES -.
AUTHOR E. Bertin (IAP)
VERSION 06/02/2008
***/
char *list_to_str(char *listname)
{
FILE *fp;
char liststr[MAXCHAR],
*listbuf, *str;
int l, bufpos, bufsize;
if (!(fp=fopen(listname,"r")))
error(EXIT_FAILURE, "*Error*: File not found: ", listname);
bufsize = 8*MAXCHAR;
QMALLOC(listbuf, char, bufsize);
for (bufpos=0; fgets(liststr,MAXCHAR,fp);)
for (str=NULL; (str=strtok(str? NULL: liststr, "\n\r\t "));)
{
if (bufpos>MAXLISTSIZE)
error(EXIT_FAILURE, "*Error*: Too many parameters in ", listname);
l = strlen(str)+1;
if (bufpos+l > bufsize)
{
bufsize += 8*MAXCHAR;
QREALLOC(listbuf, char, bufsize);
}
if (bufpos)
listbuf[bufpos-1] = ' ';
strcpy(listbuf+bufpos, str);
bufpos += l;
}
fclose(fp);
return listbuf;
}
/********************************* useprefs **********************************/
/*
Update various structures according to the prefs.
*/
void useprefs()
{
char str[80],
*pstr;
unsigned short ashort=1;
int i, flag;
#ifdef USE_THREADS
int nproc;
#endif
/* Test if byteswapping will be needed */
bswapflag = *((char *)&ashort);
/* Multithreading */
#ifdef USE_THREADS
if (prefs.nthreads <= 0)
{
/*-- Get the number of processors for parallel builds */
/*-- See, e.g. http://ndevilla.free.fr/threads */
nproc = -1;
#if defined(_SC_NPROCESSORS_ONLN) /* AIX, Solaris, Linux */
nproc = (int)sysconf(_SC_NPROCESSORS_ONLN);
#elif defined(_SC_NPROCESSORS_CONF)
nproc = (int)sysconf(_SC_NPROCESSORS_CONF);
#elif defined(__APPLE__) || defined(FREEBSD) || defined(NETBSD) /* BSD, Apple */
{
int mib[2];
size_t len;
mib[0] = CTL_HW;
mib[1] = HW_NCPU;
len = sizeof(nproc);
sysctl(mib, 2, &nproc, &len, NULL, 0);
}
#elif defined (_SC_NPROC_ONLN) /* SGI IRIX */
nproc = sysconf(_SC_NPROC_ONLN);
#elif defined(HAVE_MPCTL) /* HP/UX */
nproc = mpctl(MPC_GETNUMSPUS_SYS, 0, 0);
#endif
if (nproc>0)
prefs.nthreads = ((prefs.nthreads) && nproc>(-prefs.nthreads))?
-prefs.nthreads : nproc;
else
{
prefs.nthreads = prefs.nthreads? -prefs.nthreads : 2;
sprintf(str, "NTHREADS defaulted to %d", prefs.nthreads);
warning("Cannot find the number of CPUs on this system:", str);
}
}
#ifdef HAVE_MKL
mkl_set_num_threads(prefs.nthreads);
#else
#ifndef HAVE_ATLAS_MP
if (prefs.nthreads>1)
warning("This executable has been compiled using a version of the ATLAS "
"library without support for multithreading. ",
"Performance will be degraded.");
#endif
#ifndef HAVE_FFTWF_MP
if (prefs.nthreads>1)
warning("This executable has been compiled using a version of the FFTW "
"library without support for multithreading. ",
"Performance will be degraded.");
#endif
#endif
#else
if (prefs.nthreads != 1)
{
prefs.nthreads = 1;
warning("NTHREADS != 1 ignored: ",
"this build of " BANNER " is single-threaded");
}
#endif
/* Override INTEL CPU detection routine to help performance on 3rd-party CPUs */
#if defined(__INTEL_COMPILER) && defined (USE_CPUREDISPATCH)
__get_cpuid(1, &eax, &ebx, &ecx, &edx);
if (ecx&bit_AVX)
__intel_cpu_indicator = 0x20000;
else if (ecx&bit_SSE4_2)
__intel_cpu_indicator = 0x8000;
else if (ecx&bit_SSE4_1)
__intel_cpu_indicator = 0x2000;
else if (ecx&bit_SSSE3)
__intel_cpu_indicator = 0x1000;
else if (ecx&bit_SSE3)
__intel_cpu_indicator = 0x0800;
else if (edx&bit_SSE2)
__intel_cpu_indicator = 0x0200;
else if (edx&bit_SSE)
__intel_cpu_indicator = 0x0080;
else if (edx&bit_MMX)
__intel_cpu_indicator = 0x0008;
else
__intel_cpu_indicator = 0x0001;
#endif
if (prefs.npsf_size<2)
prefs.psf_size[1] = prefs.psf_size[0];
if (prefs.npsf_pixsize<2)
prefs.psf_pixsize[1] = prefs.psf_pixsize[0];
if (!prefs.autoselect_flag && !prefs.psf_step)
warning("SAMPLE_AUTOSELECT set to N and PSF_SAMPLING set to 0.0:\n",
" PSF_SAMPLING will default to 1 pixel");
/*------------------------------- Contexts ---------------------------------*/
if ((prefs.group_deg[0]!=0) && prefs.ncontext_group != prefs.ncontext_name)
error(EXIT_FAILURE, "*Error*: PSFVAR_GROUPS and PSFVAR_KEYS do not ",
"match");
if (!prefs.group_deg[0])
prefs.ncontext_group = 0;
for (i=0; i<prefs.ncontext_group; i++)
if (prefs.context_group[i]>prefs.ngroup_deg)
error(EXIT_FAILURE, "*Error*: PSFVAR_GROUPS out of range for ",
prefs.context_name[i]);
/* ngroup_deg implicitely states the number of groups (one degree per group) */
if (!prefs.ncontext_group)
prefs.ngroup_deg = 0;
/*---------------------------- Common/independent MEF ----------------------*/
if (prefs.newbasis_type == NEWBASIS_PCAINDEPENDENT
&& prefs.psf_mef_type == PSF_MEF_COMMON)
{
prefs.newbasis_type = NEWBASIS_PCACOMMON;
warning("NEWBASIS_TYPE PCA_INDEPENDENT is incompatible with "
"MEF_TYPE COMMON:\n", " NEWBASIS_TYPE forced to PCA_COMMON");
}
flag = 0;
for (i=0; i<prefs.ncontext_name; i++)
if (!wstrncmp(prefs.context_name[i], "HIDDEN?", 80))
{
flag = 1;
break;
}
if (flag && prefs.hidden_mef_type == HIDDEN_MEF_INDEPENDENT
&& prefs.psf_mef_type == PSF_MEF_COMMON)
{
prefs.hidden_mef_type = HIDDEN_MEF_COMMON;
warning("HIDDENMEF_TYPE INDEPENDENT is incompatible with "
"MEF_TYPE COMMON:\n", " HIDDENMEF_TYPE forced to COMMON");
}
/*--------------------------- Output directories ----------------------------*/
/* Strip final "/" if present */
if ((i=strlen(prefs.psf_dir)-1) > 0 && *(pstr=prefs.psf_dir+i) == (char)'/')
*pstr = (char)'\0';
if ((i=strlen(prefs.homokernel_dir)-1) > 0
&& *(pstr=prefs.homokernel_dir+i) == (char)'/')
*pstr = (char)'\0';
/* Output catalog */
if (!strcmp(prefs.outcat_name, "STDOUT"))
prefs.outcatpipe_flag = 1;
/*----------------------------- CHECK-images -------------------------------*/
flag = 0;
for (i=0; i<prefs.ncheck_type; i++)
if (prefs.check_type[i] != PSF_NONE) /* at least 1 is not NONE */
flag = 1;
if (flag && prefs.ncheck_name!=prefs.ncheck_type)
error(EXIT_FAILURE, "*Error*: CHECKIMAGE_NAME(s) and CHECKIMAGE_TYPE(s)",
" are not in equal number");
return;
}
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