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/*
Part of the psignifit engine source distribution version 2.5.6.
Copyright (c) J.Hill 1999-2005.
mailto:psignifit@bootstrap-software.org
http://bootstrap-software.org/psignifit/
This program is free software; you can redistribute it and/or modify it under
the terms of the GNU General Public License as published by the Free Software
Foundation; either version 2 of the License, or (at your option) any later
version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY
WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A
PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with
this program; if not, write to the Free Software Foundation, Inc., 59 Temple
Place, Suite 330, Boston, MA 02111-1307 USA
For more information, including the GNU General Public License, please read the
document Legal.txt
*/
#include "universalprefix.h"
#include <stdlib.h>
#include <string.h>
#include "batchfiles.h"
#include "mathheader.h"
#include "matlabtools.h"
#include "matrices.h"
#include "psignifit.h"
/*/////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////// */
/*/////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////// */
#ifdef MATLAB_MEX_FILE
/*/////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////// */
boolean LegalArg1(mxArray * arg);
boolean LegalArg2(mxArray * arg);
/*/////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////// */
/*/////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////// */
boolean LegalArg1(mxArray * arg) { return (boolean)(!mxIsSparse(arg) && !mxIsComplex(arg) && mxIsDouble(arg) && mxGetM(arg) > 0 && mxGetN(arg) == 3); }
/*/////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////// */
boolean LegalArg2(mxArray * arg) { return (boolean)(!mxIsSparse(arg) && !mxIsComplex(arg) && mxIsChar(arg) && mxGetM(arg) == 1 && mxGetN(arg) > 0); }
/*/////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////// */
MATLAB_GATEWAY(mexFunction)
{
mxArray * dataMatrix = NULL, * prefsMatrix = NULL;
DataSetPtr data;
ModelPtr model;
GeneratingInfoPtr gen;
OutputPtr out;
BatchPtr prefs;
size_t n;
char * prefsBuffer;
int argsOut;
boolean doSelfTest = FALSE;
matrix externalData;
TabulaRasa();
m_init();
if(nargin < 1 || nargin > 2) JError("Number of input arguments should be 1 or 2");
if(nargout > 5) nargout = 5;
mexInitOutputList(nargout, &argsOut, _argout);
if(nargin == 1 && mxIsChar(argin(1)) && mxGetNumberOfElements(argin(1)) == 2) {
mxGetString(argin(1), (prefsBuffer = New(char, 10)), 10);
doSelfTest = (strcmp(prefsBuffer, "-t") == 0);
Destroy(prefsBuffer);
if(doSelfTest) {SelfTest(); return;}
}
if(LegalArg1(argin(1))) dataMatrix = argin(1);
if(LegalArg2(argin(1))) prefsMatrix = argin(1);
if(nargin >= 2) {
if(dataMatrix==NULL && LegalArg1(argin(2))) dataMatrix = argin(2);
if(prefsMatrix==NULL && LegalArg2(argin(2))) prefsMatrix = argin(2);
if(dataMatrix==NULL) JError("data must be a full, real, 3-column matrix of doubles");
if(prefsMatrix==NULL) JError("prefs must be a string matrix with one row");
}
if(dataMatrix == NULL && prefsMatrix == NULL)
JError("data should be a 3-column double-precision matrix, prefs should be a one-line string");
if(prefsMatrix == NULL) prefs = 0;
else {
prefsBuffer = New(char, (n = mxGetNumberOfElements(prefsMatrix)) + 1);
mxGetString(prefsMatrix, prefsBuffer, n + 1);
prefs = BatchString(prefsBuffer, n, TRUE);
}
externalData = ((dataMatrix == NULL) ? NULL : m_new(mxGetPr(dataMatrix), 2, mxGetM(dataMatrix), mxGetN(dataMatrix)));
InitPrefs(prefs, &model, &data, &gen, &out, externalData);
DisposeBatch(prefs);
m_free(externalData);
Core(data, model, gen, out);
CleanUp(data, model, gen, out);
MEX_END
}
/*/////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////// */
/*/////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////// */
#else
/*/////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////// */
/*/////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////// */
#include <unistd.h>
int main(int argc, char *argv[])
{
boolean doSelfTest = FALSE;
ModelPtr model = NULL;
DataSetPtr data = NULL;
GeneratingInfoPtr gen = NULL;
OutputPtr out = NULL;
BatchPtr input = NULL;
int i;
TabulaRasa();
m_init();
if(argv[0]) {
for(i = 1; i < argc; i++) {
if(argc == 2 && strcmp(argv[i], "-t") == 0) doSelfTest = TRUE;
else input = ConcatenateBatchStrings(input, LoadPrefs(argv[i], NULL, 0, 0), TRUE, TRUE);
}
for(gExecName = argv[0], i = 0; argv[0] && argv[0][i]; i++) if(argv[0][i] == '/') gExecName = argv[0] + i + 1;
}
else {
gExecName = NULL;
input = LoadPrefs("prefs", NULL, 0, 0);
}
if(!doSelfTest && (input == NULL || !isatty(0))) input = ConcatenateBatchStrings(input, LoadPrefs("stdin", NULL, 0, 0), TRUE, TRUE);
if(input != NULL && strncmp(input->buffer, "#data\n-t", strlen("#data\n-t")) == 0) doSelfTest = TRUE;
if(doSelfTest) {DisposeBatch(input); return SelfTest();}
InitPrefs(input, &model, &data, &gen, &out, NULL);
DisposeBatch(input);
Core(data, model, gen, out);
CleanUp(data, model, gen, out);
return (EXIT_SUCCESS);
}
/*/////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////// */
/*/////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////// */
#endif /* MATLAB_MEX_FILE */
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