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|
name: CI
on:
push:
branches: [ development ]
pull_request:
# CI runs when new commits are pushed or when draft PR is marked ready for review
types: [opened, synchronize, reopened, ready_for_review]
workflow_dispatch:
inputs:
debug_enabled:
description: 'Run the build with tmate debugging enabled (https://github.com/marketplace/actions/debugging-with-tmate)'
required: false
default: false
env:
# Customize the CMake build type here (Release, Debug, RelWithDebInfo, etc.)
BUILD_TYPE: Release
OMP_NUM_THREADS: 2
jobs:
dependencies:
# Skip CI if PR is a draft
if: github.event.pull_request.draft == false
name: dependencies (${{matrix.os}}-${{matrix.cxx}}-mpi:${{matrix.mpi}}-openmp:${{matrix.omp}})
# The CMake configure and build commands are platform agnostic and should work equally
# well on Windows or Mac. You can convert this to a matrix build if you need
# cross-platform coverage.
# See: https://docs.github.com/en/free-pro-team@latest/actions/learn-github-actions/managing-complex-workflows#using-a-build-matrix
runs-on: ${{matrix.os}}
env:
CC: ${{ matrix.cc }}
CXX: ${{ matrix.cxx }}
strategy:
fail-fast: false
matrix:
os:
- ubuntu-22.04
- macos-14
cc:
- gcc-12
- clang
cxx:
- g++-12
- clang++
mpi:
- "ON"
- "OFF"
omp:
- "ON"
- "OFF"
exclude:
- os: ubuntu-22.04
cc: clang
- os: ubuntu-22.04
cxx: clang++
- os: macos-14
cc: gcc-12
- os: macos-14
cxx: g++-12
- os: macos-14
mpi: "ON"
steps:
- uses: actions/checkout@v4
- name: Setup cmake
uses: jwlawson/actions-setup-cmake@v2
with:
cmake-version: '3.31.6'
# Enable tmate debugging of manually-triggered workflows if the input option was provided
- name: Setup tmate session
uses: mxschmitt/action-tmate@v3
if: ${{ github.event_name == 'workflow_dispatch' && github.event.inputs.debug_enabled }}
- name: Prepare ccache timestamp
id: ccache_cache_timestamp
run: echo "{date_and_time}={$(date +'%Y-%m-%d-%H;%M;%S')}" >> $GITHUB_OUTPUT
- name: Set ccache cache directory
shell: bash
run: echo "CCACHE_DIR=${{runner.workspace}}/.ccache" >> "${GITHUB_ENV}"
- name: Cache ccache files
uses: actions/cache@v4
with:
path: ${{runner.workspace}}/.ccache
key: ${{matrix.os}}-${{matrix.cxx}}-${{matrix.mpi}}-${{matrix.omp}}-${{ steps.ccache_cache_timestamp.outputs.date_and_time }}
restore-keys: |
${{ matrix.os }}-${{ matrix.cxx }}-${{ matrix.mpi }}-${{ matrix.omp }}
${{ matrix.os }}-${{ matrix.cxx }}-${{ matrix.mpi }}
${{ matrix.os }}-${{ matrix.cxx }}
${{ matrix.os }}
# - name: Clear ccache
# run: ccache --clear
- name: Install Dependencies on Ubunutu
if: ${{ contains(matrix.os, 'ubuntu') }}
run: |
sudo apt update
sudo apt install openmpi-bin libopenmpi-dev libyaml-cpp-dev libeigen3-dev libtiff-dev ccache
- name: Install Dependencies on MacOS
if: ${{ contains(matrix.os, 'macos') }}
run: |
brew install open-mpi libomp yaml-cpp eigen cfitsio ccache onnxruntime
echo "CMAKE_PREFIX_PATH=/opt/homebrew/opt/libomp" >> $GITHUB_ENV
echo "/opt/homebrew/opt/ccache/libexec" >> $GITHUB_PATH
- name: Checkout Catch2
uses: actions/checkout@v4
with:
repository: catchorg/Catch2.git
path: Catch2
ref: v3.4.0
- name: Build Catch2
run: |
mkdir Catch2/build
cd Catch2/build
cmake .. -DBUILD_TESTING=OFF -DCMAKE_INSTALL_PREFIX=${{github.workspace}}/local
make -j$(nproc --ignore 1) install
- name: Install FFTW
run: |
wget --no-check-certificate --no-verbose http://www.fftw.org/fftw-3.3.10.tar.gz -O- | tar --no-same-owner -xz;
cd fftw-3.3.10
./configure --prefix=${{github.workspace}}/local --enable-shared
make -j$(nproc --ignore 1) install CFLAGS=-fPIC
# Fix bug in FFT3 (cf. https://github.com/FFTW/fftw3/issues/332)
sed -i -e 's/^.*FFTW3LibraryDepends.cmake.*$//1' ${{github.workspace}}/local/lib*/cmake/*/FFTW3Config.cmake
- name: Install HDF5
run: |
wget https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.14/hdf5-1.14.3/src/hdf5-1.14.3.tar.gz -O- | tar --no-same-owner -xz;
cd hdf5-1.14.3/
mkdir build && cd build
#CC=`which mpicc` CXX=`which mpicxx` ./configure --prefix=${{github.workspace}}/local --enable-parallel --enable-shared --enable-cxx
CC=`which mpicc` CXX=`which mpicxx` cmake .. -DBUILD_TESTING=OFF -DCMAKE_INSTALL_PREFIX=${{github.workspace}}/local -DHDF5_ENABLE_PARALLEL:BOOL=ON -DALLOW_UNSUPPORTED:BOOL=ON -DHDF5_BUILD_FORTRAN:BOOL=OFF -DHDF5_BUILD_CPP_LIB:BOOL=ON -DHDF5_ENABLE_SZIP_SUPPORT:BOOL=OFF
make -j2 install
- name: Checkout SOPT
uses: actions/checkout@v4
with:
repository: astro-informatics/sopt.git
path: sopt
ref: development
- name: Build sopt
run: |
export CMAKE_PREFIX_PATH=${{github.workspace}}/local:$CMAKE_PREFIX_PATH
mkdir -p ${{github.workspace}}/sopt/build
cd ${{github.workspace}}/sopt/build
cmake .. --fresh -DCMAKE_INSTALL_PREFIX=${{github.workspace}}/local -Donnxrt=ON -Ddompi=${{matrix.mpi}} -Dopenmp=${{matrix.omp}} -Dtests=OFF -Dexamples=OFF
make -j$(nproc --ignore 1) install
- name: Pack dependencies
run: |
cd ${{github.workspace}}
tar cfv dependencies.tar local
- uses: actions/upload-artifact@v4
with:
name: dependencies-${{ matrix.os }}-${{ matrix.cxx }}-${{ matrix.mpi }}-${{ matrix.omp }}
path: ${{github.workspace}}/dependencies.tar
retention-days: 5
test:
needs:
dependencies
name: test (${{matrix.os}}-${{matrix.cxx}}-mpi:${{matrix.mpi}}-openmp:${{matrix.omp}})
runs-on: ${{matrix.os}}
env:
CC: ${{ matrix.cc }}
CXX: ${{ matrix.cxx }}
strategy:
fail-fast: false
matrix:
os:
- ubuntu-22.04
- macos-14
cc:
- gcc-12
- clang
cxx:
- g++-12
- clang++
mpi:
- "ON"
- "OFF"
omp:
- "ON"
- "OFF"
exclude:
- os: ubuntu-22.04
cc: clang
- os: ubuntu-22.04
cxx: clang++
- os: macos-14
cc: gcc-12
- os: macos-14
cxx: g++-12
- os: macos-14
mpi: "ON"
steps:
- uses: actions/checkout@v4
- uses: actions/download-artifact@v4
with:
name: dependencies-${{ matrix.os }}-${{ matrix.cxx }}-${{ matrix.mpi }}-${{ matrix.omp }}
- name: Setup cmake
uses: jwlawson/actions-setup-cmake@v2
with:
cmake-version: '3.31.6'
- name: Unpack dependencies
run: tar xfv dependencies.tar
- name: Install Dependencies on Ubunutu
if: ${{ contains(matrix.os, 'ubuntu') }}
run: |
sudo apt update
sudo apt install openmpi-bin libopenmpi-dev ccache graphviz libeigen3-dev libtiff-dev libcfitsio-dev libboost-all-dev libyaml-cpp-dev
- name: Install Dependencies on MacOS
if: ${{ contains(matrix.os, 'macos') }}
run: |
brew install open-mpi libomp eigen ccache cfitsio boost yaml-cpp onnxruntime
echo "CMAKE_PREFIX_PATH=/opt/homebrew/opt/libomp" >> $GITHUB_ENV
echo "/opt/homebrew/opt/ccache/libexec" >> $GITHUB_PATH
- name: Build tests
# Build your program with the given configuration
run: |
export CMAKE_PREFIX_PATH=${{github.workspace}}/local:$CMAKE_PREFIX_PATH
#export PATH=${{github.workspace}}/local:$PATH
mkdir -p ${{github.workspace}}/build
cd ${{github.workspace}}/build
cmake .. --fresh -DCMAKE_INSTALL_PREFIX=${{github.workspace}}/local -Donnxrt=ON -Dhdf5=ON -Ddocasa=OFF -Ddompi=${{matrix.mpi}} -Dopenmp=${{matrix.omp}} -Dtests=ON
make -j$(nproc --ignore 1) install
- name: Test
working-directory: ${{github.workspace}}/build
# Execute tests defined by the CMake configuration.
# See https://cmake.org/cmake/help/latest/manual/ctest.1.html for more detail
run: |
export LD_LIBRARY_PATH=${{github.workspace}}/local/lib:${{github.workspace}}/local/external/lib:${LD_LIBRARY_PATH}
export DYLD_LIBRARY_PATH=${{github.workspace}}/local/lib:${{github.workspace}}/local/external/lib:${DYLD_LIBRARY_PATH}
export DYLD_LIBRARY_PATH=$(brew --prefix)/lib:${DYLD_LIBRARY_PATH}
ctest -C ${{env.BUILD_TYPE}} --output-on-failure
examples_benchmarks:
needs:
dependencies
name: examples_benchmarks (${{matrix.os}}-${{matrix.cxx}}-mpi:${{matrix.mpi}}-openmp:${{matrix.omp}})
runs-on: ${{matrix.os}}
env:
CC: ${{ matrix.cc }}
CXX: ${{ matrix.cxx }}
strategy:
fail-fast: false
matrix:
os:
- ubuntu-22.04
- macos-14
cc:
- gcc-12
- clang
cxx:
- g++-12
- clang++
mpi:
- "ON"
- "OFF"
omp:
- "ON"
exclude:
- os: ubuntu-22.04
cc: clang
- os: ubuntu-22.04
cxx: clang++
- os: macos-14
cc: gcc-12
- os: macos-14
cxx: g++-12
- os: macos-14
mpi: "ON"
- os: ubuntu-22.04
mpi: "OFF"
steps:
- uses: actions/checkout@v4
- uses: actions/download-artifact@v4
with:
name: dependencies-${{ matrix.os }}-${{ matrix.cxx }}-${{ matrix.mpi }}-${{ matrix.omp }}
- name: Setup cmake
uses: jwlawson/actions-setup-cmake@v2
with:
cmake-version: '3.31.6'
- name: Unpack dependencies
run: tar xfv dependencies.tar
- name: Install Dependencies on Ubunutu
if: ${{ contains(matrix.os, 'ubuntu') }}
run: |
sudo apt update
sudo apt install openmpi-bin libopenmpi-dev ccache graphviz libeigen3-dev libtiff-dev libcfitsio-dev libboost-all-dev libyaml-cpp-dev
wget https://github.com/google/benchmark/archive/refs/tags/v1.8.5.tar.gz -O- | tar --no-same-owner -xz;
cd benchmark-1.8.5
cmake -DBENCHMARK_DOWNLOAD_DEPENDENCIES=on -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=${{github.workspace}}/local -S . -B "build"
cmake --build "build" --config Release --target install
- name: Install Dependencies on MacOS
if: ${{ contains(matrix.os, 'macos') }}
run: |
brew install open-mpi libomp eigen ccache cfitsio boost yaml-cpp onnxruntime google-benchmark
echo "CMAKE_PREFIX_PATH=/opt/homebrew/opt/libomp" >> $GITHUB_ENV
echo "/opt/homebrew/opt/ccache/libexec" >> $GITHUB_PATH
- name: Build examples
# Build your program with the given configuration
run: |
export CMAKE_PREFIX_PATH=${{github.workspace}}/local:$CMAKE_PREFIX_PATH
mkdir -p ${{github.workspace}}/build
cd ${{github.workspace}}/build
cmake .. --fresh -DCMAKE_INSTALL_PREFIX=${{github.workspace}}/local -Donnxrt=ON -Dhdf5=ON -Ddocasa=OFF -Ddompi=${{matrix.mpi}} -Dopenmp=${{matrix.omp}} -Dtests=OFF -Dexamples=ON -Dbenchmarks=ON
make -j$(nproc --ignore 1) install
doc:
needs:
dependencies
name: doc (${{matrix.os}}-${{matrix.cxx}}-mpi:${{matrix.mpi}}-openmp:${{matrix.omp}})
runs-on: ${{matrix.os}}
env:
CC: ${{ matrix.cc }}
CXX: ${{ matrix.cxx }}
strategy:
fail-fast: false
matrix:
os:
- ubuntu-22.04
cc:
- gcc-12
cxx:
- g++-12
mpi:
- "OFF"
omp:
- "OFF"
steps:
- uses: actions/checkout@v4
- uses: actions/download-artifact@v4
with:
name: dependencies-${{ matrix.os }}-${{ matrix.cxx }}-${{ matrix.mpi }}-${{ matrix.omp }}
- name: Setup cmake
uses: jwlawson/actions-setup-cmake@v2
with:
cmake-version: '3.31.6'
- name: Unpack dependencies
run: tar xfv dependencies.tar
- name: Install Dependencies on Ubunutu
if: ${{ contains(matrix.os, 'ubuntu') }}
run: |
sudo apt update
sudo apt install ccache doxygen graphviz libeigen3-dev libtiff-dev libcfitsio-dev libboost-all-dev libyaml-cpp-dev
- name: Install Dependencies on MacOS
if: ${{ contains(matrix.os, 'macos') }}
run: |
brew install gcc libtiff eigen libyaml ccache cfitsio boost yaml-cpp onnxruntime
echo "CMAKE_PREFIX_PATH=/opt/homebrew/opt/libomp" >> $GITHUB_ENV
echo "/opt/homebrew/opt/ccache/libexec" >> $GITHUB_PATH
- name: Build docs
run: |
export CMAKE_PREFIX_PATH=${{github.workspace}}/local:$CMAKE_PREFIX_PATH
mkdir -p ${{github.workspace}}/build
cd ${{github.workspace}}/build
cmake .. --fresh -DCMAKE_INSTALL_PREFIX=${{github.workspace}}/local -Donnxrt=ON -Dhdf5=ON -Ddompi=OFF -Dopenmp=OFF -Ddocs=ON
make -j$(nproc --ignore 1) install
- name: Deploy to GH pages
if: ${{github.event_name == 'push'}}
uses: JamesIves/github-pages-deploy-action@4.1.6
with:
branch: gh-pages # The branch the action should deploy to.
folder: build/cpp/docs/html # The folder the action should deploy.
|
