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#!/usr/bin/env python
# -*- coding: utf-8 -*-
#
# Project: Fast Azimuthal integration
# https://github.com/silx-kit/pyFAI
#
# Copyright (C) 2012-2018 European Synchrotron Radiation Facility, Grenoble, France
#
# Principal author: Jérôme Kieffer (Jerome.Kieffer@ESRF.eu)
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
# copies of the Software, and to permit persons to whom the Software is
# furnished to do so, subject to the following conditions:
# .
# The above copyright notice and this permission notice shall be included in
# all copies or substantial portions of the Software.
# .
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
# THE SOFTWARE.
"""
Module with miscelaneous tools
"""
__author__ = "Jerome Kieffer"
__contact__ = "Jerome.Kieffer@ESRF.eu"
__license__ = "MIT"
__copyright__ = "European Synchrotron Radiation Facility, Grenoble, France"
__date__ = "08/01/2021"
__status__ = "production"
import logging
import sys
import os
import glob
import threading
sem = threading.Semaphore() # global lock for image processing initialization
import fabio
from .._version import calc_hexversion
if ("hexversion" in dir(fabio)) and (fabio.hexversion >= calc_hexversion(0, 2, 2)):
from fabio.nexus import exists
else:
from os.path import exists
logger = logging.getLogger(__name__)
from .. import resources
try:
from ..directories import data_dir
except ImportError:
logger.debug("Backtrace", exc_info=True)
data_dir = None
if sys.platform != "win32":
WindowsError = RuntimeError
win32 = (os.name == "nt") and (tuple.__itemsize__ == 4)
StringTypes = (bytes, str)
try:
from ..ext.fastcrc import crc32
except ImportError:
logger.debug("Backtrace", exc_info=True)
from zlib import crc32
# TODO: Added on 2018-01-01 for pyFAI 0.15
# Can be deprecated for the next release, and then removed
# Functions should be used directly from the mathutil module
from .mathutil import *
def calc_checksum(ary, safe=True):
"""
Calculate the checksum by default (or returns its buffer location if unsafe)
"""
if safe:
return crc32(ary)
else:
return ary.__array_interface__['data'][0]
def float_(val):
"""
Convert anything to a float ... or None if not applicable
"""
try:
f = float(str(val).strip())
except ValueError:
f = None
return f
def int_(val):
"""
Convert anything to an int ... or None if not applicable
"""
try:
f = int(str(val).strip())
except ValueError:
f = None
return f
def str_(val):
"""
Convert anything to a string ... but None -> ""
"""
s = ""
if val is not None:
try:
s = str(val)
except UnicodeError:
# Python2 specific...
s = unicode(val)
return s
def expand_args(args):
"""
Takes an argv and expand it (under Windows, cmd does not convert ``*.tif``
into a list of files.
Keeps only valid files (thanks to glob)
:param args: list of files or wilcards
:return: list of actual args
"""
new = []
for afile in args:
if exists(afile):
new.append(afile)
else:
new += glob.glob(afile)
return new
def _get_data_path(filename):
"""
:param filename: the name of the requested data file.
:type filename: str
Can search root of data directory in:
- Environment variable PYFAI_DATA
- path hard coded into pyFAI.directories.data_dir
- where this file is installed.
In the future ....
This method try to find the requested ui-name following the
xfreedesktop recommendations. First the source directory then
the system locations
For now, just perform a recursive search
"""
resources = [
os.environ.get("PYFAI_DATA"),
data_dir,
os.path.join(os.path.dirname(__file__), ".."),
os.path.abspath(os.path.join(os.path.dirname(__file__), ".."))]
try:
import xdg.BaseDirectory
resources += xdg.BaseDirectory.load_data_paths("pyFAI")
except ImportError:
pass
for resource in resources:
if not resource:
continue
real_filename = os.path.join(resource, "resources", filename)
if os.path.exists(real_filename):
return real_filename
else:
raise RuntimeError("Can not find the [%s] resource, "
"something went wrong !!!" % (real_filename,))
def get_calibration_dir():
"""get the full path of a calibration directory
:return: the full path of the calibrant file
"""
return _get_data_path("calibration")
def get_cl_file(resource):
"""get the full path of a openCL resource file
The resource name can be prefixed by the name of a resource directory. For
example "silx:foo.png" identify the resource "foo.png" from the resource
directory "silx".
See also :func:`silx.resources.register_resource_directory`.
:param str resource: Resource name. File name contained if the `opencl`
directory of the resources.
:return: the full path of the openCL source file
"""
if not resource.endswith(".cl"):
resource += ".cl"
s = resource.split(":")
if (len(s) == 1):
resource = "pyfai:" + resource
return resources._resource_filename(resource,
default_directory="opencl")
def get_ui_file(filename):
"""get the full path of a user-interface file
:return: the full path of the ui
"""
return _get_data_path(os.path.join("gui", filename))
class lazy_property(object):
'''
meant to be used for lazy evaluation of an object attribute.
property should represent non-mutable data, as it replaces itself.
'''
def __init__(self, fget):
self.fget = fget
self.func_name = fget.func_name if sys.version_info[0] < 3 else fget.__name__
def __get__(self, obj, cls):
if obj is None:
return None
value = self.fget(obj)
setattr(obj, self.func_name, value)
return value
def convert_CamelCase(name):
"""
convert a function name in CamelCase into camel_case
"""
import re
s1 = re.sub('(.)([A-Z][a-z]+)', r'\1_\2', name)
return re.sub('([a-z0-9])([A-Z])', r'\1_\2', s1).lower()
def readFloatFromKeyboard(text, dictVar):
"""
Read float from the keyboard ....
:param text: string to be displayed
:param dictVar: dict of this type: {1: [set_dist_min],3: [set_dist_min, set_dist_guess, set_dist_max]}
"""
fromkb = input(text).strip()
try:
vals = [float(i) for i in fromkb.split()]
except ValueError:
logging.error("Error in parsing values")
else:
found = False
for i in dictVar:
if len(vals) == i:
found = True
for j in range(i):
dictVar[i][j](vals[j])
if not found:
logger.error("You should provide the good number of floats")
class FixedParameters(set):
"""
Like a set, made for FixedParameters in geometry refinement
"""
def add_or_discard(self, key, value=True):
"""
Add a value to a set if value, else discard it
:param key: element to added or discared from set
:type value: boolean. If None do nothing !
:return: None
"""
if value is None:
return
if value:
self.add(key)
else:
self.discard(key)
def fully_qualified_name(obj):
"Return the fully qualified name of an object"
actual_class = obj.__class__.__mro__[0]
return actual_class.__module__ + "." + actual_class.__name__
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