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Figure_for_build_index.R
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Figure_for_random_access.R
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Figure_for_sequence_iteration.R
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README.md
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benchmark_fasta_build_index.sh
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benchmark_fasta_extract_subsequences.sh
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benchmark_fasta_random_access.sh
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benchmark_fasta_sequence_iterate.sh
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benchmark_fastq_build_index.sh
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benchmark_fastq_random_access.sh
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benchmark_fastq_sequence_iterate.sh
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bioperl_fasta_build_index.pl
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bioperl_fasta_extract_subsequences.pl
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bioperl_fasta_random_access.pl
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bioperl_fasta_reverse_complement.pl
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bioperl_fasta_sequence_iterate.pl
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bioperl_fastq_build_index.pl
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bioperl_fastq_random_access.pl
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bioperl_fastq_sequence_iterate.pl
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biopython_fasta_build_index.py
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biopython_fasta_extract_subsequences.py
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biopython_fasta_random_access.py
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biopython_fasta_reverse_complement.py
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biopython_fasta_sequence_iterate.py
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biopython_fastq_build_index.py
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biopython_fastq_random_access.py
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biopython_fastq_sequence_iterate_with_qualityio.py
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biopython_fastq_sequence_iterate_with_seqio.py
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generate_random_interval.py
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get_fasta_info.py
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get_fastq_info.py
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get_random_read_names_from_fastq.py
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get_random_sequence_names_from_fasta.py
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make_fasta_ggplot2_matrix.py
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make_fastq_ggplot2_matrix.py
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pyfaidx_fasta_build_index.py
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pyfaidx_fasta_extract_subsequences.py
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pyfaidx_fasta_random_access.py
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pyfaidx_fasta_reverse_complement.py
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pyfaidx_fasta_sequence_iterate.py
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pyfasta_fasta_build_index.py
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pyfasta_fasta_extract_subsequences.py
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pyfasta_fasta_random_access.py
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pyfasta_fasta_sequence_iterate.py
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pyfastx_fasta_build_index.py
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pyfastx_fasta_extract_subsequences.py
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pyfastx_fasta_random_access.py
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pyfastx_fasta_sequence_iterate_with_index.py
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pyfastx_fasta_sequence_iterate_without_index.py
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pyfastx_fastq_build_index.py
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pyfastx_fastq_random_access.py
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pyfastx_fastq_sequence_iterate_with_index.py
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pyfastx_fastq_sequence_iterate_without_index.py
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pysam_fasta_build_index.py
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pysam_fasta_extract_subsequences.py
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pysam_fasta_random_access.py
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pysam_fasta_sequence_iterate.py
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pysam_fastq_sequence_iterate.py
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