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#!/usr/bin/make -f
# See debhelper(7) (uncomment to enable)
# output every command that modifies files on the build system.
#export DH_VERBOSE = 1
export PYBUILD_NAME=pymatgen
include /usr/share/dpkg/architecture.mk
# bootstrapping problem with circular dependency between pymatgen and mp-api
# mp_api is only used by ext/matproj.py, so skip its test at build-time
# (in practice the matproj tests are skipped anyway since an MP API key is not available)
SKIP_TEST_LIST += test_matproj
# io/qchem is partly broken, skip failing tests
# io/qchem input
SKIP_TEST_LIST += test_from_multi_jobs_file test_from_string test_read_molecule test_read_nbo test_read_negative test_read_plots test_read_write_nbo7
# io/qchem output
SKIP_TEST_LIST += test_all test_custom_smd_write
# io/qchem sets (test_sets.py all fail)
SKIP_TEST_LIST += test_sets
# these io tests fail in chroot
SKIP_TEST_LIST += test_CifWriter test_read_write test_init test_get_site_symmetries
ifneq (,$(findstring $(DEB_HOST_ARCH), arm64))
SKIP_TEST_LIST += test_get_parchg
endif
ifneq (,$(findstring $(DEB_HOST_ARCH), i386))
SKIP_TEST_LIST += test_get_parchg
endif
ifneq (,$(findstring $(DEB_HOST_ARCH), mips64el))
SKIP_TEST_LIST += test_pca
endif
ifneq (,$(findstring $(DEB_HOST_ARCH), ppc64el))
SKIP_TEST_LIST += test_get_parchg
endif
ifneq (,$(findstring $(DEB_HOST_ARCH), s390x))
SKIP_TEST_LIST += test_spillage_from_vasprun test_from_file
# many VASP tests fail on s390x (and ppc64)
SKIP_TEST_LIST += test_optics test__generate_G_points test__generate_nbmax test_evaluate_wavefunc test_fft_mesh_advanced test_fft_mesh_basic
SKIP_TEST_LIST += test_get_parchg test_n2_45210 test_n2_spin test_standard test_write_unks test_consistency
endif
ifneq (,$(findstring $(DEB_HOST_ARCH), hurd-i386))
SKIP_TEST_LIST += plot test_structure_environments test_pca test_get_info_cohps_to_neighbors test_get_parchg test_as_dict_from_dict test_ir_spectra
endif
# ppc64 fails on same tests as s390x
ifneq (,$(findstring $(DEB_HOST_ARCH), ppc64))
SKIP_TEST_LIST += test_spillage_from_vasprun test_from_file
SKIP_TEST_LIST += test_optics test__generate_G_points test__generate_nbmax test_evaluate_wavefunc test_fft_mesh_advanced test_fft_mesh_basic
SKIP_TEST_LIST += test_get_parchg test_n2_45210 test_n2_spin test_standard test_write_unks test_consistency
endif
ifneq (,$(findstring $(DEB_HOST_ARCH), riscv64))
SKIP_TEST_LIST += test_get_parchg
endif
%:
dh $@ --buildsystem=pybuild
execute_after_dh_auto_clean:
rm -f pymatgen/optimization/linear_assignment.c pymatgen/optimization/neighbors.c pymatgen/util/coord_cython.c
ifeq (,$(filter nodoc,$(DEB_BUILD_OPTIONS)))
execute_after_dh_auto_build-indep: export http_proxy=127.0.0.1:9
execute_after_dh_auto_build-indep: export https_proxy=127.0.0.1:9
execute_after_dh_auto_build-indep:
PYTHONPATH=$(shell pybuild --pyver `py3versions --default -v` --print build_dir | awk '{print $$3}' ) \
make -C docs_rst html BUILDDIR=$(CURDIR)/build/html
endif
override_dh_auto_test:
py=`py3versions --default -v`; \
pybuilddir=`pybuild --pyver $$py --print build_dir | awk '{print $$3}'`; \
testdir=$(CURDIR)/.pybuild/test_python$$py; \
cp -a $$pybuilddir $$testdir; \
for t in `find pymatgen -name tests`; do \
d=`dirname $$t`; \
cp -a $$t $$testdir/$$d; \
done; \
SKIP_TESTS=""; \
list_initialised=0; \
for t in $(SKIP_TEST_LIST); do \
if [ $${list_initialised} = 0 ]; then \
SKIP_TESTS=$$t; \
list_initialised=1; \
else \
SKIP_TESTS="$${SKIP_TESTS} or $$t"; \
fi; \
done; \
if [ "x$${SKIP_TESTS}" != "x" ]; then \
SKIP_TESTS="not ( $${SKIP_TESTS} )"; \
fi; \
echo "skipping tests: $${SKIP_TESTS}"; \
PMG_TEST_FILES_DIR=/usr/share/doc/pymatgen-test-files/examples/test_files PYTHONPATH=$$testdir \
pytest-3 -v --color=no -k "$${SKIP_TESTS}" $$testdir; \
ifeq (,$(filter nodoc,$(DEB_BUILD_OPTIONS)))
execute_after_dh_installdocs-indep:
# use multiline sed to remove entire div block for google-analytics.com
grep "google-analytics.com" debian/python-pymatgen-doc/usr/share/doc/python-pymatgen-doc/html/* -r --files-with-matches | xargs sed '/./{H;$$!d} ; x ; s/<div class="footer">.*google-analytics.com.*<\/div>//' -i
grep 'src="https://anaconda.org/conda-forge/pymatgen/badges/downloads.svg"' debian/python-pymatgen-doc/usr/share/doc/python-pymatgen-doc/html/* -r --files-with-matches | xargs sed 's|src="https://anaconda.org/conda-forge/pymatgen/badges/downloads.svg"|src="_images/downloads.svg"|' -i
grep 'src="https://github.com/materialsproject/pymatgen/actions/workflows/test.yml/badge.svg"' debian/python-pymatgen-doc/usr/share/doc/python-pymatgen-doc/html/* -r --files-with-matches | xargs sed 's|src="https://github.com/materialsproject/pymatgen/actions/workflows/test.yml/badge.svg"|src="_images/tests_passing.svg"|' -i
grep 'src="https://coveralls.io/repos/github/materialsproject/pymatgen/badge.svg?branch=master"' debian/python-pymatgen-doc/usr/share/doc/python-pymatgen-doc/html/* -r --files-with-matches | xargs sed 's|src="https://coveralls.io/repos/github/materialsproject/pymatgen/badge.svg?branch=master"|src="_images/coverage.svg"|' -i
grep 'src="https://cdnjs.cloudflare.com/ajax/libs/octicons/.*/svg/mark-github.svg"' debian/python-pymatgen-doc/usr/share/doc/python-pymatgen-doc/html/* -r --files-with-matches | xargs sed 's|src="https://cdnjs.cloudflare.com/ajax/libs/octicons/.*/svg/mark-github.svg"|src="_images/mark-notgithub.svg"|' -i
endif
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