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#/*##########################################################################
# Copyright (C) 2004-2016 V.A. Sole, European Synchrotron Radiation Facility
#
# This file is part of the PyMca X-ray Fluorescence Toolkit developed at
# the ESRF by the Software group.
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
# copies of the Software, and to permit persons to whom the Software is
# furnished to do so, subject to the following conditions:
#
# The above copyright notice and this permission notice shall be included in
# all copies or substantial portions of the Software.
#
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
# THE SOFTWARE.
#
#############################################################################*/
__author__ = "V.A. Sole - ESRF Data Analysis"
__contact__ = "sole@esrf.fr"
__license__ = "MIT"
__copyright__ = "European Synchrotron Radiation Facility, Grenoble, France"
__version__ = "5.1.3"
import os
import sys
from PyMca5.PyMcaDataDir import PYMCA_DATA_DIR
try:
from fisx.DataDir import FISX_DATA_DIR
except ImportError:
FISX_DATA_DIR = None
DEBUG = 0
if sys.platform.startswith("win"):
try:
# make sure hdf5plugins are imported when using PyMca
import hdf5plugin
except:
# but at the same time do not disturb other people
pass
import ctypes
from ctypes.wintypes import MAX_PATH
elif sys.platform.startswith("darwin"):
try:
# make sure hdf5plugins are imported when using PyMca
import hdf5plugin
except:
# but at the same time do not disturb other people
pass
if os.path.exists(os.path.join(\
os.path.dirname(os.path.dirname(__file__)), 'py2app_setup.py')):
raise ImportError('PyMca cannot be imported from source directory')
def version():
return __version__
def getDefaultSettingsFile():
"""
Return the path to the default settings file (PyMca.ini).
The file itself may not exist, but this function tries to create
the containing directory if not already created.
"""
filename = "PyMca.ini"
if sys.platform == 'win32':
# recipe based on: http://bugs.python.org/issue1763#msg62242
dll = ctypes.windll.shell32
buf = ctypes.create_unicode_buffer(MAX_PATH + 1)
if dll.SHGetSpecialFolderPathW(None, buf, 0x0005, False):
directory = buf.value
else:
# the above should have worked
home = os.getenv('USERPROFILE')
try:
l = len(home)
directory = os.path.join(home, "My Documents")
except:
home = '\\'
directory = '\\'
if os.path.isdir('%s' % directory):
directory = os.path.join(directory, "PyMca")
else:
directory = os.path.join(home, "PyMca")
if not os.path.exists('%s' % directory):
os.mkdir('%s' % directory)
finalfile = os.path.join(directory, filename)
else:
home = os.getenv('HOME')
directory = os.path.join(home, "PyMca")
if not os.path.exists('%s' % directory):
os.mkdir('%s' % directory)
finalfile = os.path.join(directory, filename)
return finalfile
def getDefaultUserPluginsDirectory():
"""
Return the default directory to look for user defined plugins.
The directory will be created if not existing. In case of error it returns None.
"""
try:
settingsDir = os.path.dirname(getDefaultSettingsFile())
if os.path.exists(settingsDir):
userPluginDir = os.path.join(settingsDir, "plugins")
if not os.path.exists(userPluginDir):
os.mkdir(userPluginDir)
return userPluginDir
else:
return None
except:
print("WARNING: Cannot initialize plugis directory")
return None
def getUserDataFile(fileName, directory=""):
"""
Look for an alternative to the given filename in the default user data directory
"""
userDataDir = None
try:
settingsDir = os.path.dirname(getDefaultSettingsFile())
if os.path.exists(settingsDir):
userDataDir = os.path.join(settingsDir, "data")
if not os.path.exists(userDataDir):
os.mkdir(userDataDir)
except:
print("WARNING: cannot initialize user data directory")
if userDataDir is None:
return fileName
baseName = os.path.basename(fileName)
if len(directory):
userDataFile = os.path.join(userDataDir, directory, baseName)
else:
userDataFile = os.path.join(userDataDir, baseName)
if os.path.exists(userDataFile):
if DEBUG:
print("Using user data file: %s" % userDataFile)
return userDataFile
else:
if DEBUG:
print("Using data file: %s" % fileName)
return fileName
def getDataFile(fileName, directory=None):
"""
Look for the provided file name in directories following the priority:
0 - The provided file
1 - User data directory (~/PyMca/PyMcaData)
2 - PyMca data directory (PyMcaDataDir.PYMCA_DATA_DIR)
3 - fisx data directory (fisx.DataDir.FISX_DATA_DIR)
"""
# return the input file name if exists
if os.path.exists(fileName):
if DEBUG:
print("Filename as supplied <%s>" % newFileName)
return fileName
# the list of sub-directories where to look for the file
if directory is None:
directoryList = [""]
else:
directoryList = [directory, ""]
# user
for subdirectory in directoryList:
newFileName = getUserDataFile(fileName, directory=subdirectory)
if os.path.exists(newFileName):
if DEBUG:
print("Filename from user <%s>" % newFileName)
return newFileName
# PyMca
for subdirectory in directoryList:
newFileName = os.path.join(PYMCA_DATA_DIR,
subdirectory,
os.path.basename(fileName))
if os.path.exists(newFileName):
if DEBUG:
print("Filename from PyMca Data Directory <%s>" % newFileName)
return newFileName
# fisx
if FISX_DATA_DIR is not None:
for subdirectory in directoryList:
newFileName = os.path.join(FISX_DATA_DIR,
subdirectory,
os.path.basename(fileName))
if os.path.exists(newFileName):
if DEBUG:
print("Filename from fisx Data Directory <%s>" % \
newFileName)
return newFileName
# file not found
txt = "File not found: <%s>" % fileName
if FISX_DATA_DIR is None:
txt += " Please install fisx module (command 'pip install fisx [--user]')."
raise IOError(txt)
# workaround matplotlib MPLCONFIGDIR issues under windows
if sys.platform.startswith("win"):
try:
#try to avoid matplotlib config dir problem under windows
if os.getenv("MPLCONFIGDIR") is None:
os.environ['MPLCONFIGDIR'] = os.path.dirname(getDefaultSettingsFile())
except:
print("WARNING: Could not set MPLCONFIGDIR.", sys.exc_info()[1])
# mandatory modules for backwards compatibility
from .PyMcaCore import Plugin1DBase, StackPluginBase, PyMcaDirs, DataObject
#convenience modules that could be directly imported
# using from PyMca5.PyMca import
try:
from .PyMcaIO import specfilewrapper, EdfFile, specfile, ConfigDict
except:
print("WARNING importing IO directly")
from PyMcaIO import specfilewrapper, EdfFile, specfile, ConfigDict
from .PyMcaMath.fitting import SpecfitFuns, Gefit, Specfit
from .PyMcaMath.fitting import SpecfitFunctions
from .PyMcaPhysics.xrf import Elements
#all the rest can be imported using from PyMca5.PyMca import ...
from . import PyMca
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