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# /*#########################################################################
#
# The PyMca X-Ray Fluorescence Toolkit
#
# Copyright (c) 2004-2020 European Synchrotron Radiation Facility
#
# This file is part of the PyMca X-ray Fluorescence Toolkit developed at
# the ESRF by the Software group.
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
# copies of the Software, and to permit persons to whom the Software is
# furnished to do so, subject to the following conditions:
#
# The above copyright notice and this permission notice shall be included in
# all copies or substantial portions of the Software.
#
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
# THE SOFTWARE.
#
# ###########################################################################*/
__author__ = "T. Vincent - ESRF Data Analysis"
__contact__ = "thomas.vincent@esrf.fr"
__license__ = "MIT"
__copyright__ = "European Synchrotron Radiation Facility, Grenoble, France"
__doc__ = """
Function to save an image to a file.
"""
# import ######################################################################
import base64
import struct
import sys
import zlib
# Image writer ################################################################
def convertRGBDataToPNG(data):
"""Convert a RGB bitmap to PNG.
It only supports RGB bitmap with one byte per channel stored as a 3D array.
See `Definitive Guide <http://www.libpng.org/pub/png/book/>`_ and
`Specification <http://www.libpng.org/pub/png/spec/1.2/>`_ for details.
:param data: A 3D array (h, w, rgb) storing an RGB image
:type data: numpy.ndarray of unsigned bytes
:returns: The PNG encoded data
:rtype: bytes
"""
height, width = data.shape[0], data.shape[1]
depth = 8 # 8 bit per channel
colorType = 2 # 'truecolor' = RGB
interlace = 0 # No
pngData = []
# PNG signature
pngData.append(b'\x89PNG\r\n\x1a\n')
# IHDR chunk: Image Header
pngData.append(struct.pack(">I", 13)) # length
IHDRdata = struct.pack(">ccccIIBBBBB", b'I', b'H', b'D', b'R',
width, height, depth, colorType,
0, 0, interlace)
pngData.append(IHDRdata)
pngData.append(struct.pack(">I", zlib.crc32(IHDRdata) & 0xffffffff)) # CRC
# Add filter 'None' before each scanline
preparedData = b'\x00' + b'\x00'.join(line.tobytes() for line in data)
compressedData = zlib.compress(preparedData, 8)
# IDAT chunk: Payload
pngData.append(struct.pack(">I", len(compressedData)))
IDATdata = struct.pack("cccc", b'I', b'D', b'A', b'T')
IDATdata += compressedData
pngData.append(IDATdata)
pngData.append(struct.pack(">I", zlib.crc32(IDATdata) & 0xffffffff)) # CRC
# IEND chunk: footer
pngData.append(b'\x00\x00\x00\x00IEND\xaeB`\x82')
return b''.join(pngData)
def saveImageToFile(data, fileNameOrObj, fileFormat):
"""Save a RGB image to a file.
:param data: A 3D array (h, w, 3) storing an RGB image.
:type data: numpy.ndarray with of unsigned bytes.
:param fileNameOrObj: Filename or object to use to write the image.
:type fileNameOrObj: A str or a 'file-like' object with a 'write' method.
:param str fileType: The type of the file in: 'png', 'ppm', 'svg', 'tiff'.
"""
assert len(data.shape) == 3
assert data.shape[2] == 3
assert fileFormat in ('png', 'ppm', 'svg', 'tiff')
if not hasattr(fileNameOrObj, 'write'):
if sys.version < "3.0":
fileObj=open(fileNameOrObj, "wb")
else:
fileObj=open(fileNameOrObj, "w", newline='')
else: # Use as a file-like object
fileObj = fileNameOrObj
if fileFormat == 'svg':
height, width = data.shape[:2]
base64Data = base64.b64encode(convertRGBDataToPNG(data))
fileObj.write(
'<?xml version="1.0" encoding="UTF-8" standalone="no"?>\n')
fileObj.write('<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"\n')
fileObj.write(
' "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">\n')
fileObj.write('<svg xmlns:xlink="http://www.w3.org/1999/xlink"\n')
fileObj.write(' xmlns="http://www.w3.org/2000/svg"\n')
fileObj.write(' version="1.1"\n')
fileObj.write(' width="%d"\n' % width)
fileObj.write(' height="%d">\n' % height)
fileObj.write(' <image xlink:href="data:image/png;base64,')
fileObj.write(base64Data.decode('ascii'))
fileObj.write('"\n')
fileObj.write(' x="0"\n')
fileObj.write(' y="0"\n')
fileObj.write(' width="%d"\n' % width)
fileObj.write(' height="%d"\n' % height)
fileObj.write(' id="image" />\n')
fileObj.write('</svg>')
elif fileFormat == 'ppm':
height, width = data.shape[:2]
fileObj.write('P6\n')
fileObj.write('%d %d\n' % (width, height))
fileObj.write('255\n')
fileObj.write(data.tobytes())
elif fileFormat == 'png':
fileObj.write(convertRGBDataToPNG(data))
elif fileFormat == 'tiff':
if fileObj == fileNameOrObj:
raise NotImplementedError(
'Save TIFF to a file-like object not implemented')
from PyMca5.PyMcaIO.TiffIO import TiffIO
tif = TiffIO(fileNameOrObj, mode='wb+')
tif.writeImage(data, info={'Title': 'PyMCA GL Snapshot'})
if fileObj != fileNameOrObj:
fileObj.close()
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