1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527
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PyMOL>bg white
PyMOL>bg_color black
PyMOL>bg_color 0
PyMOL>bg_color 1
PyMOL>bg_color blue
PyMOL>bg_color -28374283
Color-Error: Bad color name.
PyMOL>bg_color 239283498
Color-Error: Bad color name.
PyMOL>bg_color asdfasdf
Color-Error: Bad color name.
PyMOL>dele all
PyMOL>reset
PyMOL>clip
Parsing-Error: missing required argument: mode
PyMOL>clip near
Parsing-Error: missing required argument: distance
PyMOL>clip near,-5
PyMOL>clip far,10
PyMOL>clip near,2
PyMOL>clip far,-3
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 1.000 0.000 0.000 0.000 1.000
0.000 0.000 -50.000 0.000 0.000 0.000 43.000 93.000 -20.000
PyMOL>dele all
PyMOL>load dat/1tii.pdb
HEADER ENTEROTOXIN 20-MAR-96 1TII
TITLE ESCHERICHIA COLI HEAT LABILE ENTEROTOXIN TYPE IIB
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: HEAT LABILE ENTEROTOXIN TYPE IIB;
COMPND 3 CHAIN: D, E, F, G, H, A, C;
COMPND 4 SYNONYM: LT-IIB;
COMPND 5 ENGINEERED: YES;
COMPND 6 OTHER_DETAILS: LATENT/INACTIVE FORM
ObjectMolecule: Read secondary structure assignments.
ObjectMolecule: Read crystal symmetry information.
Symmetry: Found 6 symmetry operators.
CmdLoad: "dat/1tii.pdb" loaded as "1tii".
PyMOL>hide
PyMOL>show cartoon
PyMOL>ray
RayRenderTest: obtained 67216 graphics primitives.
PyMOL>cartoon rect
PyMOL>ray
RayRenderTest: obtained 39552 graphics primitives.
PyMOL>cartoon loop
PyMOL>ray
RayRenderTest: obtained 59232 graphics primitives.
PyMOL>cartoon tube
PyMOL>ray
RayRenderTest: obtained 88720 graphics primitives.
PyMOL>cartoon oval
PyMOL>ray
RayRenderTest: obtained 98720 graphics primitives.
PyMOL>cartoon arrow
PyMOL>ray
RayRenderTest: obtained 39552 graphics primitives.
PyMOL>cartoon dumbbell
PyMOL>ray
RayRenderTest: obtained 138176 graphics primitives.
PyMOL>cartoon automatic
PyMOL>ray
RayRenderTest: obtained 67216 graphics primitives.
PyMOL>cartoon loop,ss h
PyMOL>cartoon tube,ss s
PyMOL>ray
RayRenderTest: obtained 66876 graphics primitives.
PyMOL>cartoon skip,resi 1-100
PyMOL>ray
RayRenderTest: obtained 10678 graphics primitives.
PyMOL>dele all
PyMOL>dele all
PyMOL>load dat/pept.pdb
CmdLoad: "dat/pept.pdb" loaded as "pept".
PyMOL>color
Parsing-Error: missing required argument: color
PyMOL>color -123454
Color-Error: Unknown color.
PyMOL>color 1023912
Color-Error: Unknown color.
PyMOL>color blue
Executive: Colored 107 atoms.
PyMOL>color red
Executive: Colored 107 atoms.
PyMOL>color 99
Executive: Colored 107 atoms.
PyMOL>color blue,pept
Executive: Colored 107 atoms and 1 object.
PyMOL>color green,cgo
Executive: Colored 1 object.
PyMOL>color red,(all)
Executive: Colored 107 atoms.
PyMOL>dele all
PyMOL>cgo_tuple = (SPHERE, 0.0, 0.0, 0.0, 1.0)
PyMOL>cmd.load_cgo(cgo_tuple,'cgo')
PyMOL>ray renderer=2
RayRenderTest: obtained 1 graphics primitives.
PyMOL>dele all
PyMOL>dele all
PyMOL>load dat/pept.pdb
CmdLoad: "dat/pept.pdb" loaded as "pept".
PyMOL>load dat/3al1.pdb
HEADER STRUCTURAL PROTEIN 26-OCT-98 3AL1
TITLE DESIGNED PEPTIDE ALPHA-1, RACEMIC P1BAR FORM
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: D, L-ALPHA-1;
COMPND 3 CHAIN: A, B;
COMPND 4 ENGINEERED: YES;
COMPND 5 OTHER_DETAILS: N TERMINI ARE ACETYLATED
ObjectMolecule: Read secondary structure assignments.
ObjectMolecule: Read crystal symmetry information.
Symmetry: Found 2 symmetry operators.
CmdLoad: "dat/3al1.pdb" loaded as "3al1".
PyMOL>disable
PyMOL>enable pept
PyMOL>ray
RayRenderTest: obtained 166 graphics primitives.
PyMOL>disable
PyMOL>enable 3al1
PyMOL>ray
RayRenderTest: obtained 1266 graphics primitives.
PyMOL>disable
PyMOL>enable
PyMOL>ray
RayRenderTest: obtained 1432 graphics primitives.
PyMOL>disable
PyMOL>enable all
PyMOL>ray
RayRenderTest: obtained 1432 graphics primitives.
PyMOL>disable
PyMOL>enable 3al1
PyMOL>enable pept
PyMOL>ray
RayRenderTest: obtained 1432 graphics primitives.
PyMOL>dele all
PyMOL>reset
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 1.000 0.000 0.000 0.000 1.000
0.000 0.000 -50.000 0.000 0.000 0.000 40.000 100.000 -20.000
PyMOL>load dat/pept.pdb
CmdLoad: "dat/pept.pdb" loaded as "pept".
PyMOL>hide
PyMOL>ray
RayRenderTest: obtained 0 graphics primitives.
PyMOL>show (name ca)
PyMOL>ray
RayRenderTest: obtained 0 graphics primitives.
PyMOL>show (name c)
PyMOL>ray
RayRenderTest: obtained 13 graphics primitives.
PyMOL>show (all)
PyMOL>ray
RayRenderTest: obtained 166 graphics primitives.
PyMOL>hide (name ca)
PyMOL>ray
RayRenderTest: obtained 115 graphics primitives.
PyMOL>hide
PyMOL>ray
RayRenderTest: obtained 0 graphics primitives.
PyMOL>show sticks
PyMOL>ray
RayRenderTest: obtained 166 graphics primitives.
PyMOL>show spheres,(name ca)
PyMOL>ray
RayRenderTest: obtained 179 graphics primitives.
PyMOL>show surface,(not name n)
PyMOL>hide (name o)
PyMOL>ray
RepSurface: 1319 surface points.
RepSurface: 2634 triangles.
RayRenderTest: obtained 2412 graphics primitives.
PyMOL>hide surf
PyMOL>ray
RayRenderTest: obtained 153 graphics primitives.
PyMOL>hide sph
PyMOL>ray
RayRenderTest: obtained 140 graphics primitives.
PyMOL>hide sticks
PyMOL>ray
RayRenderTest: obtained 0 graphics primitives.
PyMOL>dele all
PyMOL>dele all
PyMOL>load dat/pept.pdb
CmdLoad: "dat/pept.pdb" loaded as "pept".
PyMOL>label (all),resi
Label: labelled 107 atoms.
PyMOL>label (name ca),"ca"
Label: labelled 13 atoms.
PyMOL>label (name n),"%s-%s-%s"%(chain,resi,resn)
Label: labelled 13 atoms.
PyMOL>label (all),''
Label: labelled 107 atoms.
PyMOL>label (all)
Label: labelled 107 atoms.
PyMOL>dele all
PyMOL>dele all
PyMOL>reset
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 1.000 0.000 0.000 0.000 1.000
0.000 0.000 -50.000 0.000 0.000 0.000 40.000 100.000 -20.000
PyMOL>move
Parsing-Error: missing required argument: axis
PyMOL>move x
Parsing-Error: missing required argument: distance
PyMOL>move y
Parsing-Error: missing required argument: distance
PyMOL>move z
Parsing-Error: missing required argument: distance
PyMOL>move x,10
PyMOL>move y,5
PyMOL>move z,2
PyMOL>move z,-1
PyMOL>move x,-10
PyMOL>move y,2
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 1.000 0.000 0.000 0.000 1.000
0.000 7.000 -49.000 0.000 0.000 0.000 39.000 99.000 -20.000
PyMOL>dele all
PyMOL>dele all
PyMOL>load dat/pept.pdb
CmdLoad: "dat/pept.pdb" loaded as "pept".
PyMOL>orient
PyMOL>orient (none)
PyMOL>orient (name ca)
PyMOL>orient (resi 10)
PyMOL>orient (name ca and i. 10)
PyMOL>dele all
PyMOL>dele all
PyMOL>load dat/pept.pdb
CmdLoad: "dat/pept.pdb" loaded as "pept".
PyMOL>origin
PyMOL>origin (none)
PyMOL>origin (name ca)
PyMOL>origin (resi 10)
PyMOL>origin (name ca and i. 10)
PyMOL>dele all
PyMOL>dele all
PyMOL>load dat/pept.pdb
CmdLoad: "dat/pept.pdb" loaded as "pept".
PyMOL>show dots
PyMOL>ray
RayRenderTest: obtained 6837 graphics primitives.
PyMOL>alter (all),vdw=5.0
Alter: modified 107 atoms.
PyMOL>refresh
PyMOL>ray
RayRenderTest: obtained 6837 graphics primitives.
PyMOL>rebuild
PyMOL>ray
RayRenderTest: obtained 1960 graphics primitives.
PyMOL>dele all
PyMOL>dele all
PyMOL>load dat/pept.pdb
CmdLoad: "dat/pept.pdb" loaded as "pept".
PyMOL>color shoot
Color-Error: Unknown color.
PyMOL>set_color shoot,[1.0,0.9,1.0]
Color: "shoot" defined as [ 1.000, 0.900, 1.000 ].
PyMOL>color shoot
Executive: Colored 107 atoms.
PyMOL>refresh
PyMOL>set_color shoot,[1.0,0.0,1.0]
Color: "shoot" defined as [ 1.000, 0.000, 1.000 ].
PyMOL>recolor
PyMOL>refresh
PyMOL>dele all
PyMOL>dele all
PyMOL>reset
PyMOL>cmd._dump_floats(v1)
1.000 0.000 0.000 0.000 1.000 0.000 0.000 0.000 1.000
0.000 0.000 -50.000 0.000 0.000 0.000 40.000 100.000 -20.000
PyMOL>load dat/pept.pdb
CmdLoad: "dat/pept.pdb" loaded as "pept".
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 1.000 0.000 0.000 0.000 1.000
0.000 0.000 -63.191 1.224 -10.279 20.545 49.820 76.561 -20.000
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 1.000 0.000 0.000 0.000 1.000
0.000 0.000 -50.000 0.000 0.000 0.000 40.000 100.000 -20.000
PyMOL>dele all
PyMOL>dele all
PyMOL>reset
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 1.000 0.000 0.000 0.000 1.000
0.000 0.000 -50.000 0.000 0.000 0.000 40.000 100.000 -20.000
PyMOL>turn
Parsing-Error: missing required argument: axis
PyMOL>turn x
Parsing-Error: missing required argument: angle
PyMOL>turn y
Parsing-Error: missing required argument: angle
PyMOL>turn z
Parsing-Error: missing required argument: angle
PyMOL>turn x,10
PyMOL>turn y,5
PyMOL>turn z,2
PyMOL>turn z,-1
PyMOL>turn x,-10
PyMOL>turn y,2
PyMOL>cmd._dump_floats(cmd.get_view(0))
0.992 0.002 -0.124 -0.002 1.000 -0.001 0.124 0.001 0.992
0.000 0.000 -50.000 0.000 0.000 0.000 40.000 100.000 -20.000
PyMOL>dele all
PyMOL>dele all
PyMOL>reset
PyMOL>view
Parsing-Error: missing required argument: key
PyMOL>view 1,store
view: view stored as "1".
PyMOL>view 2,store
view: view stored as "2".
PyMOL>move x,10
PyMOL>view 2,st
view: view stored as "2".
PyMOL>reset
PyMOL>move y,-10
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 1.000 0.000 0.000 0.000 1.000
0.000 -10.000 -50.000 0.000 0.000 0.000 40.000 100.000 -20.000
PyMOL>view 1,recall
view: "1" recalled.
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 1.000 0.000 0.000 0.000 1.000
0.000 0.000 -50.000 0.000 0.000 0.000 40.000 100.000 -20.000
PyMOL>view 2,rec
view: "2" recalled.
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 1.000 0.000 0.000 0.000 1.000
10.000 0.000 -50.000 0.000 0.000 0.000 40.000 100.000 -20.000
PyMOL>turn x,10
PyMOL>view test,store
view: view stored as "test".
PyMOL>turn x,20
PyMOL>view rest,store
view: view stored as "rest".
PyMOL>view test
view: "test" recalled.
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.985 0.174 0.000 -0.174 0.985
10.000 0.000 -50.000 0.000 0.000 0.000 40.000 100.000 -20.000
PyMOL>view rest
view: "rest" recalled.
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.866 0.500 0.000 -0.500 0.866
10.000 0.000 -50.000 0.000 0.000 0.000 40.000 100.000 -20.000
PyMOL>view rest,clear
view: 'rest' deleted.
PyMOL>view rest
Error: unknown view: 'rest'. Choices:
1 2 test
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.866 0.500 0.000 -0.500 0.866
10.000 0.000 -50.000 0.000 0.000 0.000 40.000 100.000 -20.000
PyMOL>view test
view: "test" recalled.
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.985 0.174 0.000 -0.174 0.985
10.000 0.000 -50.000 0.000 0.000 0.000 40.000 100.000 -20.000
PyMOL>viewport
PyMOL>viewport 300
PyMOL>viewport 100,100
PyMOL>viewport 300,300
PyMOL>viewport 640,480
PyMOL>dele all
PyMOL>load dat/pept.pdb
CmdLoad: "dat/pept.pdb" loaded as "pept".
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.985 0.174 0.000 -0.174 0.985
0.000 0.000 -63.191 1.224 -10.279 20.545 49.820 76.561 -20.000
PyMOL>zoom
PyMOL>zoom resi 10
PyMOL>zoom resi 4,5,6
ExecutiveWindowZoom-Warning: selection doesn't specify any coordinates.
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.985 0.174 0.000 -0.174 0.985
0.000 0.000 -14.178 2.395 -9.290 18.016 11.178 17.178 -20.000
PyMOL>dele all
PyMOL>load dat/1tii.pdb,m1
HEADER ENTEROTOXIN 20-MAR-96 1TII
TITLE ESCHERICHIA COLI HEAT LABILE ENTEROTOXIN TYPE IIB
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: HEAT LABILE ENTEROTOXIN TYPE IIB;
COMPND 3 CHAIN: D, E, F, G, H, A, C;
COMPND 4 SYNONYM: LT-IIB;
COMPND 5 ENGINEERED: YES;
COMPND 6 OTHER_DETAILS: LATENT/INACTIVE FORM
ObjectMolecule: Read secondary structure assignments.
ObjectMolecule: Read crystal symmetry information.
Symmetry: Found 6 symmetry operators.
CmdLoad: "dat/1tii.pdb" loaded as "m1".
PyMOL>load dat/il2.pdb,m1
CmdLoad: "dat/il2.pdb" appended into object "m1", state 2.
PyMOL>load dat/pept.pdb,m1
CmdLoad: "dat/pept.pdb" appended into object "m1", state 3.
PyMOL>zoom m1
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.985 0.174 0.000 -0.174 0.985
0.000 0.000 -269.487 39.950 5.709 13.189 212.466 326.509 -20.000
PyMOL>zoom m1,state=0
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.985 0.174 0.000 -0.174 0.985
0.000 0.000 -269.487 39.950 5.709 13.189 212.466 326.509 -20.000
PyMOL>zoom m1,state=1
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.985 0.174 0.000 -0.174 0.985
0.000 0.000 -227.278 51.665 11.519 10.196 179.188 275.368 -20.000
PyMOL>zoom m1,state=2
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.985 0.174 0.000 -0.174 0.985
0.000 0.000 -149.541 9.985 -9.318 20.976 117.899 181.182 -20.000
PyMOL>zoom m1,state=3
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.985 0.174 0.000 -0.174 0.985
0.000 0.000 -63.191 1.224 -10.279 20.545 49.820 76.561 -20.000
PyMOL>zoom m1,state=4
ExecutiveWindowZoom-Warning: selection doesn't specify any coordinates.
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.985 0.174 0.000 -0.174 0.985
0.000 0.000 -63.191 1.224 -10.279 20.545 49.820 76.561 -20.000
PyMOL>origin m1
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.985 0.174 0.000 -0.174 0.985
38.726 17.022 -67.659 39.950 5.709 13.189 49.820 76.561 -20.000
PyMOL>origin m1,state=0
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.985 0.174 0.000 -0.174 0.985
38.726 17.022 -67.659 39.950 5.709 13.189 49.820 76.561 -20.000
PyMOL>origin m1,state=1
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.985 0.174 0.000 -0.174 0.985
50.441 23.264 -69.598 51.665 11.519 10.196 49.820 76.561 -20.000
PyMOL>origin m1,state=2
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.985 0.174 0.000 -0.174 0.985
8.761 0.872 -62.600 9.985 -9.318 20.976 49.820 76.561 -20.000
PyMOL>origin m1,state=3
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.985 0.174 0.000 -0.174 0.985
0.000 0.000 -63.191 1.224 -10.279 20.545 49.820 76.561 -20.000
PyMOL>origin m1,state=4
PyMOL>cmd._dump_floats(cmd.get_view(0))
1.000 0.000 0.000 0.000 0.985 0.174 0.000 -0.174 0.985
0.000 0.000 -63.191 1.224 -10.279 20.545 49.820 76.561 -20.000
PyMOL>orient m1
PyMOL>cmd._dump_ufloats(cmd.get_view(0))
0.924 0.347 0.160 0.338 0.550 0.763 0.177 0.760 0.626
0.000 0.000 269.487 39.950 5.709 13.189 212.466 326.509 20.000
PyMOL>orient m1,state=0
PyMOL>cmd._dump_ufloats(cmd.get_view(0))
0.924 0.347 0.160 0.338 0.550 0.763 0.177 0.760 0.626
0.000 0.000 269.487 39.950 5.709 13.189 212.466 326.509 20.000
PyMOL>orient m1,state=1
PyMOL>cmd._dump_ufloats(cmd.get_view(0))
0.899 0.239 0.366 0.288 0.306 0.907 0.329 0.921 0.206
0.000 0.000 227.278 51.665 11.519 10.196 179.188 275.368 20.000
PyMOL>orient m1,state=2
PyMOL>cmd._dump_ufloats(cmd.get_view(0))
0.288 0.019 0.958 0.301 0.951 0.072 0.909 0.309 0.279
0.000 0.000 149.541 9.985 9.318 20.976 117.899 181.182 20.000
PyMOL>orient m1,state=3
PyMOL>cmd._dump_ufloats(cmd.get_view(0))
0.537 0.312 0.784 0.841 0.118 0.529 0.072 0.943 0.325
0.000 0.000 63.191 1.224 10.279 20.545 49.820 76.561 20.000
PyMOL>orient m1,state=4
PyMOL>cmd._dump_ufloats(cmd.get_view(0))
0.537 0.312 0.784 0.841 0.118 0.529 0.072 0.943 0.325
0.000 0.000 63.191 1.224 10.279 20.545 49.820 76.561 20.000
PyMOL>zoom m1,state=-5000
PyMOL>zoom (none),state=5
ExecutiveWindowZoom-Warning: selection doesn't specify any coordinates.
PyMOL>zoom (all),state=-1
PyMOL>zoom (all),state=0
PyMOL>cmd._dump_ufloats(cmd.get_view(0))
0.537 0.312 0.784 0.841 0.118 0.529 0.072 0.943 0.325
0.000 0.000 269.487 39.950 5.709 13.189 212.466 326.509 20.000
PyMOL>dele all
PyMOL>load dat/1tii.pdb
HEADER ENTEROTOXIN 20-MAR-96 1TII
TITLE ESCHERICHIA COLI HEAT LABILE ENTEROTOXIN TYPE IIB
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: HEAT LABILE ENTEROTOXIN TYPE IIB;
COMPND 3 CHAIN: D, E, F, G, H, A, C;
COMPND 4 SYNONYM: LT-IIB;
COMPND 5 ENGINEERED: YES;
COMPND 6 OTHER_DETAILS: LATENT/INACTIVE FORM
ObjectMolecule: Read secondary structure assignments.
ObjectMolecule: Read crystal symmetry information.
Symmetry: Found 6 symmetry operators.
CmdLoad: "dat/1tii.pdb" loaded as "1tii".
PyMOL>cmd._dump_floats(cmd.get_extent("1tii")[0])
11.590 -22.877 -28.270
PyMOL>cmd._dump_floats(cmd.get_extent("1tii")[1])
84.681 40.101 47.233
PyMOL>cmd._dump_floats(cmd.get_extent("1TII")[0])
11.590 -22.877 -28.270
PyMOL>cmd._dump_floats(cmd.get_extent("1TII")[1])
84.681 40.101 47.233
PyMOL>cmd._dump_floats(cmd.get_extent("1Tii")[0])
11.590 -22.877 -28.270
PyMOL>cmd._dump_floats(cmd.get_extent("1Tii")[1])
84.681 40.101 47.233
PyMOL>cmd._dump_floats(cmd.get_extent("1tii////cA")[0])
12.578 -21.622 -23.339
PyMOL>cmd._dump_floats(cmd.get_extent("1tii////ca")[1])
81.195 38.760 45.050
PyMOL>cmd._dump_floats(cmd.get_extent("1TII////cA")[0])
12.578 -21.622 -23.339
PyMOL>cmd._dump_floats(cmd.get_extent("1TII////ca")[1])
81.195 38.760 45.050
PyMOL>cmd._dump_floats(cmd.get_extent("1Tii////cA")[0])
12.578 -21.622 -23.339
PyMOL>cmd._dump_floats(cmd.get_extent("1Tii////ca")[1])
81.195 38.760 45.050
PyMOL>dist TSt,/1tii//A/TYR`3/CD1, /1tii//F/ARG`12/NE
Executive: object "TSt" created.
PyMOL>cmd._dump_floats(cmd.get_extent("tst")[0])
35.306 24.391 -8.737
PyMOL>cmd._dump_floats(cmd.get_extent("tst")[1])
77.385 25.286 6.130
PyMOL>cmd._dump_floats(cmd.get_extent("TST")[0])
35.306 24.391 -8.737
PyMOL>cmd._dump_floats(cmd.get_extent("TST")[1])
77.385 25.286 6.130
PyMOL>cmd._dump_floats(cmd.get_extent("tSt")[0])
35.306 24.391 -8.737
PyMOL>cmd._dump_floats(cmd.get_extent("tSt")[1])
77.385 25.286 6.130
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