File: L0030isomesh.log

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pymol 2.4.0%2Bdfsg-2
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file content (112 lines) | stat: -rw-r--r-- 3,865 bytes parent folder | download | duplicates (9)
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PyMOL>load lrg/map.ccp4
 ObjectMapCCP4: Map Size 88 x 61 x 67
 ObjectMapCCP4: Normalizing with mean = 0.000987 and stdev = 0.265128.
 ObjectMap: Map Read.  Range = -3.439 to 4.509
 Crystal: Unit Cell           91.144   91.144   45.856
 Crystal: Alpha Beta Gamma    90.000   90.000   90.000
 Crystal: RealToFrac Matrix
 Crystal:    0.0110    0.0000    0.0000
 Crystal:    0.0000    0.0110    0.0000
 Crystal:    0.0000    0.0000    0.0218
 Crystal: FracToReal Matrix
 Crystal:   91.1443    0.0000    0.0000
 Crystal:    0.0000   91.1443    0.0000
 Crystal:    0.0000    0.0000   45.8557
 Crystal: Unit Cell Volume   380936.
 ExecutiveLoad: "lrg/map.ccp4" loaded as "map", through state 0.
PyMOL>isomesh m1,map,1.0
 Executive: object "m1" created.
 Isomesh: created "m1", setting level to 1.000
PyMOL>ray renderer=2
 ObjectMesh: updating "m1".
 RayRenderTest: obtained 153933 graphics primitives.
PyMOL>isomesh m1,map,0.5
 Isomesh: created "m1", setting level to 0.500
PyMOL>ray renderer=2
 ObjectMesh: updating "m1".
 RayRenderTest: obtained 272657 graphics primitives.
PyMOL>isomesh m1,map,500
 Isomesh: created "m1", setting level to 500.000
PyMOL>ray renderer=2
 ObjectMesh: updating "m1".
 RayRenderTest: obtained 0 graphics primitives.
PyMOL>isomesh m1,map,-3000
 Isomesh: created "m1", setting level to -3000.000
PyMOL>ray renderer=2
 ObjectMesh: updating "m1".
 RayRenderTest: obtained 0 graphics primitives.
PyMOL>dele m1
 Executive: object "m2" created.
PyMOL>ray renderer=2
 ObjectMesh: updating "m2".
 ObjectMesh: updating "m2".
 ObjectMesh: updating "m2".
 ObjectMesh: updating "m2".
 ObjectMesh: updating "m2".
 ObjectMesh: updating "m2".
 ObjectMesh: updating "m2".
 ObjectMesh: updating "m2".
 ObjectMesh: updating "m2".
 RayRenderTest: obtained 143834 graphics primitives.
PyMOL>frame 3
PyMOL>ray renderer=2
 RayRenderTest: obtained 128185 graphics primitives.
PyMOL>frame 8
PyMOL>ray renderer=2
 RayRenderTest: obtained 96677 graphics primitives.
PyMOL>dele all
PyMOL>load lrg/map.xplor
 ObjectMapLoadXPLOR: Loading...
 ObjectMap: Map Read.  Range = -3.439 to 8.717
 Crystal: Unit Cell           91.144   91.144   45.856
 Crystal: Alpha Beta Gamma    90.000   90.000   90.000
 Crystal: RealToFrac Matrix
 Crystal:    0.0110    0.0000    0.0000
 Crystal:    0.0000    0.0110    0.0000
 Crystal:    0.0000    0.0000    0.0218
 Crystal: FracToReal Matrix
 Crystal:   91.1443    0.0000    0.0000
 Crystal:    0.0000   91.1443    0.0000
 Crystal:    0.0000    0.0000   45.8557
 Crystal: Unit Cell Volume   380936.
 ExecutiveLoad: "lrg/map.xplor" loaded as "map", through state 0.
PyMOL>isomesh m1,map,1.0
 Executive: object "m1" created.
 Isomesh: created "m1", setting level to 1.000
PyMOL>ray renderer=2
 ObjectMesh: updating "m1".
 RayRenderTest: obtained 153933 graphics primitives.
PyMOL>isomesh m1,map,0.5
 Isomesh: created "m1", setting level to 0.500
PyMOL>ray renderer=2
 ObjectMesh: updating "m1".
 RayRenderTest: obtained 272657 graphics primitives.
PyMOL>isomesh m1,map,500
 Isomesh: created "m1", setting level to 500.000
PyMOL>ray renderer=2
 ObjectMesh: updating "m1".
 RayRenderTest: obtained 0 graphics primitives.
PyMOL>isomesh m1,map,-3000
 Isomesh: created "m1", setting level to -3000.000
PyMOL>ray renderer=2
 ObjectMesh: updating "m1".
 RayRenderTest: obtained 0 graphics primitives.
PyMOL>dele m1
 Executive: object "m2" created.
PyMOL>ray renderer=2
 ObjectMesh: updating "m2".
 ObjectMesh: updating "m2".
 ObjectMesh: updating "m2".
 ObjectMesh: updating "m2".
 ObjectMesh: updating "m2".
 ObjectMesh: updating "m2".
 ObjectMesh: updating "m2".
 ObjectMesh: updating "m2".
 ObjectMesh: updating "m2".
 RayRenderTest: obtained 96677 graphics primitives.
PyMOL>frame 3
PyMOL>ray renderer=2
 RayRenderTest: obtained 128185 graphics primitives.
PyMOL>frame 8
PyMOL>ray renderer=2
 RayRenderTest: obtained 96677 graphics primitives.