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from pymol.cgo import *
from pymol import cmd
from random import random, seed
from chempy import cpv
obj = []
scale = 1.0
# display VMD-like coordinate axes
obj.extend( [ SAUSAGE,
0.0, 0.0, 0.0, # XYZ 1
scale, 0.0, 0.0, # XYZ 2
0.1 * scale, # Radius
1.0, 0.3, 0.3, # RGB Color 1
1.0, 0.3, 0.3, # RGB Color 2
] )
obj.extend( [ CONE,
scale, 0.0, 0.0, # XYZ 1
scale * 1.2, 0.0, 0.0, # XYZ 2
0.3 * scale, # Radius 1
0.0, # Radius 2
1.0, 0.3, 0.3, # RGB Color 1
1.0, 0.3, 0.3, # RGB Color 2
1.0, 1.0, # Caps 1 & 2
] )
obj.extend( [ SAUSAGE,
0.0, 0.0, 0.0, # XYZ 1
0.0, scale, 0.0, # XYZ 2
0.1 * scale, # Radius
0.3, 1.0, 0.3, # RGB Color 1
0.3, 1.0, 0.3, # RGB Color 2
] )
obj.extend( [ CONE,
0.0, scale, 0.0, # XYZ 1
0.0, scale * 1.2, 0.0, # XYZ 2
0.3 * scale, # Radius 1
0.0, # Radius 2
0.3, 1.0, 0.3, # RGB Color 1
0.3, 1.0, 0.3, # RGB Color 2
1.0, 1.0, # Caps 1 & 2
] )
obj.extend( [ SAUSAGE,
0.0, 0.0, 0.0, # XYZ 1
0.0, 0.0, scale, # XYZ 2
0.1 * scale, # Radius
0.3, 0.3, 1.0, # RGB Color 1
0.3, 0.3, 1.0, # RGB Color 2
] )
obj.extend( [ CONE,
0.0, 0.0, scale, # XYZ 1
0.0, 0.0, scale * 1.2, # XYZ 2
0.3 * scale, # Radius 1
0.0, # Radius 2
0.3, 0.3, 1.0, # RGB Color 1
0.3, 0.3, 1.0, # RGB Color 2
1.0, 1.0, # Caps 1 & 2
] )
cmd.load_cgo(obj,'cgo_axes')
# rotate the view
cmd.turn('y',-45)
cmd.turn('x',30)
# zoom out a bit
cmd.zoom('all', 2)
# move the read clipping plane back a bit to brighten things up
cmd.clip('far',-5)
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