File: userlabels2.mae

package info (click to toggle)
pymol 3.1.0%2Bdfsg-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 74,084 kB
  • sloc: cpp: 482,660; python: 89,328; ansic: 29,512; javascript: 6,792; sh: 84; makefile: 25
file content (85 lines) | stat: -rw-r--r-- 2,345 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
{ 
 s_m_m2io_version
 :::
 2.0.0 
} 

f_m_ct { 
 s_m_title
 s_m_entry_id
 s_m_entry_name
 s_m_Source_Path
 s_m_Source_File
 i_m_Source_File_Index
 i_m_ct_format
 :::
 "Displayed atoms" 
  1 
  userlabels.1 
  /d2/home/thomas/Downloads 
  userlabels.mae 
  1
  2
 m_atom[10] { 
  # First column is atom index #
  i_m_mmod_type
  r_m_x_coord
  r_m_y_coord
  r_m_z_coord
  i_m_residue_number
  s_m_mmod_res
  s_m_chain_name
  i_m_color
  s_m_pdb_residue_name
  s_m_pdb_atom_name
  i_m_atomic_number
  s_m_color_rgb
  s_m_atom_name
  i_m_secondary_structure
  s_m_label_format
  i_m_label_color
  s_m_label_user_text
  r_m_pdb_occupancy
  r_m_pdb_tfactor
  i_pdb_PDB_serial
  i_pdb_seqres_index
  s_user_GPCR_generic_numbering
  :::
  1 26 -53.486000 2.259000 20.709000 32 W A 38 "TRP " " N  " 7 2E2EFF  "N22"  1 "%UA:s_user_GPCR_generic_numbering:%RT"  24 ""  1 95.21 22 39 <>
  2 4 -52.267000 3.063000 20.735000 32 W A 24 "TRP " " CA " 6 808080  "C23"  1 "%UA:s_user_GPCR_generic_numbering:%RT"  24 "dummy"  1 94.6 23 39 1.31 
  3 7 -51.837000 3.491000 19.319000 32 W A 24 "TRP " " C  " 6 808080  "C24"  1 "%UA:s_user_GPCR_generic_numbering:%RT"  24 ""  1 93.6 24 39 <>
  4 15 -51.335000 4.603000 19.140000 32 W A 70 "TRP " " O  " 8 FF2E2E  "O25"  1 "%UA:s_user_GPCR_generic_numbering:%RT"  24 ""  1 91.48 25 39 <>
  5 3 -51.129000 2.273000 21.427000 32 W A 24 "TRP " " CB " 6 808080  "C26"  1 "%UA:s_user_GPCR_generic_numbering:%RT"  24 ""  1 96.93 26 39 <>
  6 43 -53.737356 1.997181 21.651534 32 W A 21 "TRP " " H1 " 1 FFFFFF  ""  -1 ""  1 ""  <> <> <> <> <>
  7 43 -54.235802 2.796677 20.298147 32 W A 21 "TRP " " H2 " 1 FFFFFF  ""  -1 ""  1 ""  <> <> <> <> <>
  8 41 -50.222962 2.878761 21.442780 32 W A 21 "TRP " " HB1" 1 FFFFFF  ""  -1 ""  1 ""  <> <> <> <> <>
  9 41 -51.422341 2.032284 22.448815 32 W A 21 "TRP " " HB2" 1 FFFFFF  ""  -1 ""  1 ""  <> <> <> <> <>
  10 41 -50.939538 1.351096 20.877184 32 W A 21 "TRP " " HB3" 1 FFFFFF  ""  -1 ""  1 ""  <> <> <> <> <>
  :::
 } 
 m_bond[13] { 
  # First column is bond index #
  i_m_from
  i_m_to
  i_m_order
  i_m_from_rep
  i_m_to_rep
  b_m_thin_bond
  :::
  1 1 2 1 2 2 0
  2 1 6 1 2 2 <>
  3 1 7 1 2 2 <>
  4 2 1 1 2 2 0
  5 2 3 1 2 2 0
  6 2 5 1 2 2 0
  7 3 2 1 2 2 0
  8 3 4 2 2 2 0
  9 4 3 2 2 2 0
  10 5 2 1 2 2 0
  11 5 8 1 2 2 <>
  12 5 9 1 2 2 <>
  13 5 10 1 2 2 <>
  :::
 } 
}