File: pdbloading.py

package info (click to toggle)
pymol 3.1.0%2Bdfsg-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 74,084 kB
  • sloc: cpp: 482,660; python: 89,328; ansic: 29,512; javascript: 6,792; sh: 84; makefile: 25
file content (19 lines) | stat: -rw-r--r-- 509 bytes parent folder | download 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
 
'''
Stress testing for pdb loading
'''

from __future__ import print_function

import time
from pymol import cmd, testing, stored

@testing.requires('no_run_all')
class StressPDBLoading(testing.PyMOLTestCase):
    @testing.foreach('1rx1.pdb', '1aon.pdb.gz')
    def testPDBLoad(self, dfile):
        tm = []
        for i in range(1, 100):
            start = time.time()
            cmd.load(self.datafile(dfile))
            tm.append(time.time() - start)
        print("min time('", dfile, "')=", min(tm))