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import json
from typing import Any
import pytest
import pystac
from pystac.asset import Asset
from pystac.errors import ExtensionTypeError, RequiredPropertyMissing, STACError
from pystac.extensions.pointcloud import (
AssetPointcloudExtension,
PhenomenologyType,
PointcloudExtension,
Schema,
SchemaType,
Statistic,
)
from pystac.summaries import RangeSummary
from tests.utils import TestCases, assert_to_from_dict
# from copy import deepcopy
@pytest.fixture
def example_uri() -> str:
return TestCases.get_path("data-files/pointcloud/example-laz.json")
@pytest.fixture
def pc_item(example_uri: str) -> pystac.Item:
return pystac.Item.from_file(example_uri)
@pytest.fixture
def pc_no_stats_item() -> pystac.Item:
return pystac.Item.from_file(
TestCases.get_path("data-files/pointcloud/example-laz-no-statistics.json")
)
@pytest.fixture
def plain_item() -> pystac.Item:
return pystac.Item.from_file(TestCases.get_path("data-files/item/sample-item.json"))
@pytest.fixture
def collection() -> pystac.Collection:
return pystac.Collection.from_file(
TestCases.get_path("data-files/collections/multi-extent.json")
)
def test_to_from_dict(example_uri: str) -> None:
with open(example_uri) as f:
d = json.load(f)
assert_to_from_dict(pystac.Item, d)
def test_apply() -> None:
item = next(TestCases.case_2().get_items(recursive=True))
assert not PointcloudExtension.has_extension(item)
PointcloudExtension.add_to(item)
PointcloudExtension.ext(item).apply(
1000,
PhenomenologyType.LIDAR,
"laszip",
[Schema({"name": "X", "size": 8, "type": "floating"})],
)
assert PointcloudExtension.has_extension(item)
@pytest.mark.vcr()
def test_validate_pointcloud(pc_item: pystac.Item) -> None:
pc_item.validate()
@pytest.mark.vcr()
def test_count(pc_item: pystac.Item) -> None:
# Get
assert "pc:count" in pc_item.properties
pc_count = PointcloudExtension.ext(pc_item).count
assert pc_count == pc_item.properties["pc:count"]
# Set
PointcloudExtension.ext(pc_item).count = pc_count + 100
assert pc_count + 100 == pc_item.properties["pc:count"]
# Validate
pc_item.validate()
# Cannot test validation errors until the pointcloud schema.json syntax is fixed
# Ensure setting bad count fails validation
with pytest.raises(pystac.STACValidationError):
PointcloudExtension.ext(pc_item).count = "not_an_int" # type:ignore
pc_item.validate()
@pytest.mark.vcr()
def test_type(pc_item: pystac.Item) -> None:
# Get
assert "pc:type" in pc_item.properties
pc_type = PointcloudExtension.ext(pc_item).type
assert pc_type == pc_item.properties["pc:type"]
# Set
PointcloudExtension.ext(pc_item).type = "sonar"
assert "sonar" == pc_item.properties["pc:type"]
# Validate
pc_item.validate()
@pytest.mark.vcr()
def test_encoding(pc_item: pystac.Item) -> None:
# Get
assert "pc:encoding" in pc_item.properties
pc_encoding = PointcloudExtension.ext(pc_item).encoding
assert pc_encoding == pc_item.properties["pc:encoding"]
# Set
PointcloudExtension.ext(pc_item).encoding = "binary"
assert "binary" == pc_item.properties["pc:encoding"]
# Validate
pc_item.validate()
@pytest.mark.vcr()
def test_schemas(pc_item: pystac.Item) -> None:
# Get
assert "pc:schemas" in pc_item.properties
pc_schemas = [s.to_dict() for s in PointcloudExtension.ext(pc_item).schemas]
assert pc_schemas == pc_item.properties["pc:schemas"]
# Set
schema = [Schema({"name": "X", "size": 8, "type": "floating"})]
PointcloudExtension.ext(pc_item).schemas = schema
assert [s.to_dict() for s in schema] == pc_item.properties["pc:schemas"]
# Validate
pc_item.validate()
@pytest.mark.vcr()
def test_statistics(pc_item: pystac.Item) -> None:
# Get
assert "pc:statistics" in pc_item.properties
statistics = PointcloudExtension.ext(pc_item).statistics
assert statistics is not None
pc_statistics = [s.to_dict() for s in statistics]
assert pc_statistics == pc_item.properties["pc:statistics"]
# Set
stats = [
Statistic(
{
"average": 1,
"count": 1,
"maximum": 1,
"minimum": 1,
"name": "Test",
"position": 1,
"stddev": 1,
"variance": 1,
}
)
]
PointcloudExtension.ext(pc_item).statistics = stats
assert [s.to_dict() for s in stats] == pc_item.properties["pc:statistics"]
# Validate
pc_item.validate()
@pytest.mark.vcr()
def test_density(pc_item: pystac.Item) -> None:
# Get
assert "pc:density" in pc_item.properties
pc_density = PointcloudExtension.ext(pc_item).density
assert pc_density == pc_item.properties["pc:density"]
# Set
density = 100
PointcloudExtension.ext(pc_item).density = density
assert density == pc_item.properties["pc:density"]
# Validate
pc_item.validate()
def test_pointcloud_schema() -> None:
props: dict[str, Any] = {
"name": "test",
"size": 8,
"type": "floating",
}
schema = Schema(props)
assert props == schema.properties
# test all getters and setters
for k in props:
if isinstance(props[k], str):
val = props[k] + str(1)
else:
val = props[k] + 1
setattr(schema, k, val)
assert getattr(schema, k) == val
schema = Schema.create("intensity", 16, SchemaType.UNSIGNED)
assert schema.name == "intensity"
assert schema.size == 16
assert schema.type == "unsigned"
with pytest.raises(STACError):
schema.size = 0.5 # type: ignore
empty_schema = Schema({})
for required_prop in {"size", "name", "type"}:
with pytest.raises(RequiredPropertyMissing):
getattr(empty_schema, required_prop)
def test_pointcloud_statistics() -> None:
props: dict[str, Any] = {
"average": 1,
"count": 1,
"maximum": 1,
"minimum": 1,
"name": "Test",
"position": 1,
"stddev": 1,
"variance": 1,
}
stat = Statistic(props)
assert props == stat.properties
# test all getters and setters
for k in props:
if isinstance(props[k], str):
val = props[k] + str(1)
else:
val = props[k] + 1
setattr(stat, k, val)
assert getattr(stat, k) == val
stat = Statistic.create("foo", 1, 2, 3, 4, 5, 6, 7)
assert stat.name == "foo"
assert stat.position == 1
assert stat.average == 2
assert stat.count == 3
assert stat.maximum == 4
assert stat.minimum == 5
assert stat.stddev == 6
assert stat.variance == 7
stat.name = None # type: ignore
assert "name" not in stat.properties
stat.position = None
assert "position" not in stat.properties
stat.average = None
assert "average" not in stat.properties
stat.count = None
assert "count" not in stat.properties
stat.maximum = None
assert "maximum" not in stat.properties
stat.minimum = None
assert "minimum" not in stat.properties
stat.stddev = None
assert "stddev" not in stat.properties
stat.variance = None
assert "variance" not in stat.properties
empty_stat = Statistic({})
with pytest.raises(RequiredPropertyMissing):
empty_stat.name
def test_statistics_accessor_when_no_stats(pc_no_stats_item: pystac.Item) -> None:
assert PointcloudExtension.ext(pc_no_stats_item).statistics is None
def test_asset_extension(pc_no_stats_item: pystac.Item) -> None:
asset = Asset(
"https://github.com/PDAL/PDAL/blob"
"/a6c986f68458e92414a66c664408bee4737bbb08/test/data/laz"
"/autzen_trim.laz",
"laz file",
"The laz data",
"application/octet-stream",
["data"],
{"foo": "bar"},
)
pc_no_stats_item.add_asset("data", asset)
ext = AssetPointcloudExtension(asset)
assert ext.asset_href == asset.href
assert ext.properties == asset.extra_fields
assert ext.additional_read_properties == [pc_no_stats_item.properties]
def test_ext(pc_no_stats_item: pystac.Item) -> None:
PointcloudExtension.ext(pc_no_stats_item)
asset = Asset(
"https://github.com/PDAL/PDAL/blob"
"/a6c986f68458e92414a66c664408bee4737bbb08/test/data/laz"
"/autzen_trim.laz",
"laz file",
"The laz data",
"application/octet-stream",
["data"],
{"foo": "bar"},
)
PointcloudExtension.ext(asset)
class RandomObject:
pass
with pytest.raises(
ExtensionTypeError,
match=r"^PointcloudExtension does not apply to type 'RandomObject'$",
):
# calling it wrong on purpose so -----------------v
PointcloudExtension.ext(RandomObject()) # type: ignore
def test_extension_not_implemented(plain_item: pystac.Item) -> None:
# Should raise exception if Item does not include extension URI
with pytest.raises(pystac.ExtensionNotImplemented):
_ = PointcloudExtension.ext(plain_item)
# Should raise exception if owning Item does not include extension URI
asset = plain_item.assets["thumbnail"]
with pytest.raises(pystac.ExtensionNotImplemented):
_ = PointcloudExtension.ext(asset)
# Should succeed if Asset has no owner
ownerless_asset = pystac.Asset.from_dict(asset.to_dict())
_ = PointcloudExtension.ext(ownerless_asset)
def test_item_ext_add_to(plain_item: pystac.Item) -> None:
assert PointcloudExtension.get_schema_uri() not in plain_item.stac_extensions
_ = PointcloudExtension.ext(plain_item, add_if_missing=True)
assert PointcloudExtension.get_schema_uri() in plain_item.stac_extensions
def test_asset_ext_add_to(plain_item: pystac.Item) -> None:
assert PointcloudExtension.get_schema_uri() not in plain_item.stac_extensions
asset = plain_item.assets["thumbnail"]
_ = PointcloudExtension.ext(asset, add_if_missing=True)
assert PointcloudExtension.get_schema_uri() in plain_item.stac_extensions
def test_summaries_count(collection: pystac.Collection) -> None:
summaries_ext = PointcloudExtension.summaries(collection, True)
count_range = RangeSummary(1000, 10000)
summaries_ext.count = count_range
assert summaries_ext.count == count_range
summaries_dict = collection.to_dict()["summaries"]
assert summaries_dict["pc:count"] == count_range.to_dict()
def test_summaries_type(collection: pystac.Collection) -> None:
summaries_ext = PointcloudExtension.summaries(collection, True)
type_list = [PhenomenologyType.LIDAR, "something"]
summaries_ext.type = type_list
assert summaries_ext.type == type_list
summaries_dict = collection.to_dict()["summaries"]
assert summaries_dict["pc:type"] == type_list
def test_summaries_encoding(collection: pystac.Collection) -> None:
summaries_ext = PointcloudExtension.summaries(collection, True)
encoding_list = ["LASzip"]
summaries_ext.encoding = encoding_list
assert summaries_ext.encoding == encoding_list
summaries_dict = collection.to_dict()["summaries"]
assert summaries_dict["pc:encoding"] == encoding_list
def test_summaries_density(collection: pystac.Collection) -> None:
summaries_ext = PointcloudExtension.summaries(collection, True)
density_range = RangeSummary(500.0, 1000.0)
summaries_ext.density = density_range
assert summaries_ext.density == density_range
summaries_dict = collection.to_dict()["summaries"]
assert summaries_dict["pc:density"] == density_range.to_dict()
def test_summaries_statistics(collection: pystac.Collection) -> None:
summaries_ext = PointcloudExtension.summaries(collection, True)
statistics_list = [
Statistic(
{
"average": 637294.1783,
"count": 10653336,
"maximum": 639003.73,
"minimum": 635577.79,
"name": "X",
"position": 0,
"stddev": 967.9329805,
"variance": 936894.2548,
}
)
]
summaries_ext.statistics = statistics_list
assert summaries_ext.statistics == statistics_list
summaries_dict = collection.to_dict()["summaries"]
assert summaries_dict["pc:statistics"] == [s.to_dict() for s in statistics_list]
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