File: test_tipnp.py

package info (click to toggle)
python-ase 3.21.1-2
  • links: PTS, VCS
  • area: main
  • in suites: bullseye
  • size: 13,936 kB
  • sloc: python: 122,428; xml: 946; makefile: 111; javascript: 47
file content (29 lines) | stat: -rw-r--r-- 896 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
def test_tipnp():
    """Test TIP3P forces."""
    from math import cos, sin, pi

    from ase import Atoms
    from ase.calculators.tip3p import TIP3P, rOH, angleHOH
    from ase.calculators.tip4p import TIP4P

    r = rOH
    a = angleHOH * pi / 180

    dimer = Atoms('H2OH2O',
                  [(r * cos(a), 0, r * sin(a)),
                   (r, 0, 0),
                   (0, 0, 0),
                   (r * cos(a / 2), r * sin(a / 2), 0),
                   (r * cos(a / 2), -r * sin(a / 2), 0),
                   (0, 0, 0)])
    dimer = dimer[[2, 0, 1, 5, 3, 4]]
    dimer.positions[3:, 0] += 2.8

    for TIPnP in [TIP3P, TIP4P]:
        # put O-O distance in the cutoff range
        dimer.calc = TIPnP(rc=4.0, width=2.0)
        F = dimer.get_forces()
        print(F)
        dF = dimer.calc.calculate_numerical_forces(dimer) - F
        print(dF)
        assert abs(dF).max() < 2e-6