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# the blocks are separated by empty lines
# comments are allowed
#
# one body - LJ-parameters and charge
CT 0.0028619844 3.50 0.000
C 0.0028619844 3.50 0.000
O 0.0073717780 3.12 -0.683
HC 0.0013009018 2.50 0.000
H1 0 0 0
# bonds
C -CT 317.0 1.522 JCC,7,(1986),230; AA
C -O 570.0 1.229 JCC,7,(1986),230; AA,CYT,GUA,THY,URA
CT-HC 340.0 1.090 changed from 331 bsd on NMA nmodes; AA, SUGARS
C -H1 340.0 1.090
# angles
CT-C -O 80.0 120.40
HC-CT-HC 35.0 109.50
CT-C -H1 70.0 117.00
# dihedrals
O -C -CT-HC 0.00000 6.02496E-01 -3
# cutoffs
C -CT 2.0
C -O 1.8
CT-HC 1.4
C -H1 1.4
C3-O1 1.8 # extra stuff, should not bother
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