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--- # ASE Gitlab CI configuration
variables:
OMP_NUM_THREADS: "1"
PIP_CACHE_DIR: "$CI_PROJECT_DIR/pip-cache"
PYTEST_ADDOPTS: "--color=yes --durations=20 -r s"
stages:
- test
- paperwork
- deploy
# This will ensure that only pipelines in master get to update the cache,
# see https://docs.gitlab.com/ci/caching/
# conditional-policy:
# rules:
# - if: $CI_COMMIT_BRANCH == $CI_DEFAULT_BRANCH
# variables:
# POLICY: pull-push
# - if: $CI_COMMIT_BRANCH != $CI_DEFAULT_BRANCH
# variables:
# POLICY: pull
# Check oldest supported Python with oldest supported libraries.
# Does not install any optional libraries except matplotlib.
oldlibs:
image: registry.gitlab.com/ase/ase:ase-oldlibs
before_script:
- pwd
- whoami
- >
pip install
numpy==1.19.5 scipy==1.6.0 matplotlib==3.3.4
pytest==7.0.0 attrs==20.3.0 pluggy==1.0.0 py==1.11.0 six==1.15.0
pytest-xdist==2.1.0 execnet==1.8.1 pytest-forked==1.4.0
- pip install --no-deps .
script:
- ase test
cache:
key: oldlibs
paths:
- $PIP_CACHE_DIR
# For testing newest versions of libraries against standard images
# on dockerhub.
pipinstall:
image: python:3.11
before_script:
- python --version
- pip install .[test]
script:
- ase test
when: manual
# This is the main test job using new versions of libraries.
# The intention is to enable as many features and libraries as possible.
#
# We execute it inside the project dir with --editable in order for
# the coverage script to correctly resolve the OMIT paths (a bit hacky).
# It would be better to install it for real, and for things to just work.
main:
image: registry.gitlab.com/ase/ase:ase-main
before_script:
- python --version
- pip install --no-deps --editable .
- ase info --calculators
- cd $CI_PROJECT_DIR
script:
- >
ase test
--calculators asap,ff,lj,morse,tip3p,tip4p
--coverage --pytest
--junit-xml=report.xml
after_script:
- coverage xml --data-file ase/test/.coverage
- mv ase/test/coverage-html coverage-main
- mv ase/test/.coverage coverage-main/coverage.dat
artifacts:
paths:
- coverage-main/
reports:
coverage_report:
coverage_format: cobertura
path: coverage.xml
junit: ase/test/report.xml
expire_in: 1 week
cache:
key: main
paths:
- $PIP_CACHE_DIR
# Calculator integration tests which always run.
# Encompasses those tests marked as @pytest.mark.calculator_lite.
# Please make sure these tests are cheap.
calculators-lite:
image: registry.gitlab.com/ase/ase:ase-full-monty
before_script:
- pip install --no-deps --editable .
- export ASE_CONFIG_PATH=/home/ase/aseconfig.ini
- sed 's/binary = /command = /' -i /home/ase/aseconfig.ini
script:
- >
ase test calculator --calculators=auto --coverage
--pytest -m calculator_lite
--junit-xml=report.xml
after_script:
- coverage xml --data-file ase/test/.coverage
- mv ase/test/coverage-html coverage-calculators-lite
- mv ase/test/.coverage coverage-calculators-lite/coverage.dat
artifacts:
paths:
- coverage-calculators-lite/
reports:
coverage_report:
coverage_format: cobertura
path: coverage.xml
junit: ase/test/report.xml
expire_in: 1 week
cache:
key: calculators
paths:
- $PIP_CACHE_DIR
# Plan: Test as many calculators as possible as well as possible.
# Obviously this is kind of expensive so the job is manually activated.
# Also, the docker serves as a knowledgebase for how to set up those
# calculators with ASE.
#
# It would be great if someone could enable more calculators with this.
calculators:
image: registry.gitlab.com/ase/ase:ase-full-monty
before_script:
- pip install --no-deps --editable .
- export ASE_CONFIG_PATH=/home/ase/aseconfig.ini
- sed 's/binary = /command = /' -i /home/ase/aseconfig.ini
- ase info --calculators
script:
- >
ase test calculator --calculators abinit,asap,cp2k,dftb,espresso,gpaw,kim,lammpslib,lammpsrun,mopac,nwchem,octopus,siesta
--coverage --pytest --junit-xml=report.xml
after_script:
- coverage xml --data-file ase/test/.coverage
- mv ase/test/coverage-html coverage-calculators
- mv ase/test/.coverage coverage-calculators/coverage.dat
rules:
- if: $CI_PIPELINE_SOURCE == "push"
when: manual
allow_failure: true
- if: $CI_PIPELINE_SOURCE == "schedule"
artifacts:
paths:
- coverage-calculators/
reports:
coverage_report:
coverage_format: cobertura
path: coverage.xml
junit: ase/test/report.xml
expire_in: 1 week
cache:
key: calculators
policy: pull
paths:
- $PIP_CACHE_DIR
bleeding-edge:
image: python:3-alpine
variables:
PIP_CACHE_DIR: "$CI_PROJECT_DIR/pip-cache"
before_script:
- pip install --upgrade numpy scipy matplotlib
- pip install --editable .[test]
- pip freeze
script:
- ase test --pytest --ignore gui/ --ignore test_imports.py
cache:
paths:
- $PIP_CACHE_DIR
key: bleeding-edge
doc:
image: registry.gitlab.com/ase/ase:ase-main
variables:
PIP_CACHE_DIR: "$CI_PROJECT_DIR/pip-cache-doc"
before_script:
- pip install scriv sphinx_book_theme
- pip install --no-deps .[docs]
- ase info
- which sphinx-build
script:
- scriv collect --keep || echo Not compiling changelog then # Avoid error
- python -m ase.utils.sphinx run # test scripts
- sphinx-build -W doc doc/build
- mv doc/build web-html
cache:
paths:
- $PIP_CACHE_DIR
key: doc
artifacts:
paths:
- web-html
expire_in: 1 week
distribution-package:
image: registry.gitlab.com/ase/ase:ase-main
before_script:
- mkdir dist
- pip install setuptools build
script:
- python -m build
- ls dist/*
- pip install dist/ase-*.tar.gz
- ase test
- pip uninstall --yes ase
- pip install dist/ase-*-py3-none-any.whl
- ase test
artifacts:
paths:
- dist
expire_in: 1 week
rules:
- if: $CI_COMMIT_TAG
- if: $CI_PIPELINE_SOURCE == "schedule"
- if: $CI_PIPELINE_SOURCE == "push"
when: manual
# Publish code coverage data on web.
# * The deploy stage is specially recognized by gitlab
# * The jobname pages is specially recognized by gitlab
# * The public/ directory is specially recognized by gitlab
# https://about.gitlab.com/blog/2016/11/03/publish-code-coverage-report-with-gitlab-pages/
pages:
stage: deploy
dependencies:
- coverage-combine
- doc
script:
- mkdir public
- mv coverage-html public/
- pwd
- ls
- mv web-html/* public/
artifacts:
paths:
- public
expire_in: 2 weeks
only:
- master
lint:
image: python:3.12.4-alpine
before_script:
- pip install .[lint]
- pip freeze
script:
- mypy --version
- mypy --color-output -p ase
- python -We:invalid -m compileall -f -q ase/
- ruff check
- ruff format --check
variables:
PIP_CACHE_DIR: "$CI_PROJECT_DIR/pip-cache"
cache:
paths:
- $PIP_CACHE_DIR
key: lint
coverage-combine:
image: registry.gitlab.com/ase/ase:ase-paperwork
stage: paperwork
dependencies:
- main
- calculators-lite
script:
- cd ase/test # Next to .coveragerc and friends
- coverage combine ../../coverage-main/coverage.dat ../../coverage-calculators-lite/coverage.dat
- coverage report
- coverage html
- cd ../..
- mv ase/test/coverage-html .
coverage: '/TOTAL.+ ([0-9]+\.[0-9]+%)/'
artifacts:
paths:
- coverage-html
expire_in: 1 week
.windows_test:
tags:
- saas-windows-medium-amd64
stage: test
before_script:
# https://stackoverflow.com/questions/61791108/gitlab-ci-shared-windows-runner-for-python
# https://gitlab.com/gitlab-org/ci-cd/shared-runners/images/gcp/windows-containers/-/issues/13
- Import-Module "$env:ChocolateyInstall\helpers\chocolateyProfile.psm1"
- choco install python --version=3.9 -y -f
- refreshenv
- python --version
- python -m pip install --upgrade pip
- python -m pip install pytest
- python -m pip install .
script:
- >
ase test
--calculators eam,ff,lj,morse,tip3p,tip4p
--pytest
-W "ignore:The --rsyncdir command line argument"
-W "ignore:NumPy will stop allowing conversion of out-of-bound Python integers"
rules:
- if: $CI_PIPELINE_SOURCE == "push"
when: manual
allow_failure: true
- if: $CI_PIPELINE_SOURCE == "schedule"
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