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# Licensed under a 3-clause BSD style license - see LICENSE.rst
from __future__ import (absolute_import, division, print_function,
unicode_literals)
import inspect
import numpy as np
from ...extern import six
from ...tests.helper import catch_warnings, pytest
from ...utils.exceptions import AstropyUserWarning
from ... import units as u
from ..nddata import NDData
from ..decorators import support_nddata
class CCDData(NDData):
pass
@support_nddata
def wrapped_function_1(data, wcs=None, unit=None):
return data, wcs, unit
def test_pass_numpy():
data_in = np.array([1, 2, 3])
data_out, wcs_out, unit_out = wrapped_function_1(data=data_in)
assert data_out is data_in
assert wcs_out is None
assert unit_out is None
def test_pass_all_separate():
data_in = np.array([1, 2, 3])
wcs_in = "the wcs"
unit_in = u.Jy
data_out, wcs_out, unit_out = wrapped_function_1(data=data_in, wcs=wcs_in, unit=unit_in)
assert data_out is data_in
assert wcs_out is wcs_in
assert unit_out is unit_in
def test_pass_nddata():
data_in = np.array([1, 2, 3])
wcs_in = "the wcs"
unit_in = u.Jy
nddata_in = NDData(data_in, wcs=wcs_in, unit=unit_in)
data_out, wcs_out, unit_out = wrapped_function_1(nddata_in)
assert data_out is data_in
assert wcs_out is wcs_in
assert unit_out is unit_in
def test_pass_nddata_and_explicit():
data_in = np.array([1, 2, 3])
wcs_in = "the wcs"
unit_in = u.Jy
unit_in_alt = u.mJy
nddata_in = NDData(data_in, wcs=wcs_in, unit=unit_in)
with catch_warnings() as w:
data_out, wcs_out, unit_out = wrapped_function_1(nddata_in, unit=unit_in_alt)
assert data_out is data_in
assert wcs_out is wcs_in
assert unit_out is unit_in_alt
assert len(w) == 1
assert str(w[0].message) == ("Property unit has been passed explicitly and as "
"an NDData property, using explicitly specified value")
def test_pass_nddata_ignored():
data_in = np.array([1, 2, 3])
wcs_in = "the wcs"
unit_in = u.Jy
nddata_in = NDData(data_in, wcs=wcs_in, unit=unit_in, mask=[0, 1, 0])
with catch_warnings() as w:
data_out, wcs_out, unit_out = wrapped_function_1(nddata_in)
assert data_out is data_in
assert wcs_out is wcs_in
assert unit_out is unit_in
assert len(w) == 1
assert str(w[0].message) == ("The following attributes were set on the data "
"object, but will be ignored by the function: mask")
def test_incorrect_first_argument():
with pytest.raises(ValueError) as exc:
@support_nddata
def wrapped_function_2(something, wcs=None, unit=None):
pass
assert exc.value.args[0] == "Can only wrap functions whose first positional argument is `data`"
with pytest.raises(ValueError) as exc:
@support_nddata
def wrapped_function_3(something, data, wcs=None, unit=None):
pass
assert exc.value.args[0] == "Can only wrap functions whose first positional argument is `data`"
with pytest.raises(ValueError) as exc:
@support_nddata
def wrapped_function_4(wcs=None, unit=None):
pass
assert exc.value.args[0] == "Can only wrap functions whose first positional argument is `data`"
def test_wrap_function_no_kwargs():
@support_nddata
def wrapped_function_5(data, other_data):
return data
data_in = np.array([1, 2, 3])
nddata_in = NDData(data_in)
assert wrapped_function_5(nddata_in, [1, 2, 3]) is data_in
def test_wrap_function_repack_valid():
@support_nddata(repack=True, returns=['data'])
def wrapped_function_5(data, other_data):
return data
data_in = np.array([1, 2, 3])
nddata_in = NDData(data_in)
nddata_out = wrapped_function_5(nddata_in, [1, 2, 3])
assert isinstance(nddata_out, NDData)
assert nddata_out.data is data_in
def test_wrap_function_accepts():
class MyData(NDData):
pass
@support_nddata(accepts=MyData)
def wrapped_function_5(data, other_data):
return data
data_in = np.array([1, 2, 3])
nddata_in = NDData(data_in)
mydata_in = MyData(data_in)
assert wrapped_function_5(mydata_in, [1, 2, 3]) is data_in
with pytest.raises(TypeError) as exc:
wrapped_function_5(nddata_in, [1, 2, 3])
assert exc.value.args[0] == "Only NDData sub-classes that inherit from MyData can be used by this function"
def test_wrap_preserve_signature_docstring():
@support_nddata
def wrapped_function_6(data, wcs=None, unit=None):
"""
An awesome function
"""
pass
if wrapped_function_6.__doc__ is not None:
assert wrapped_function_6.__doc__.strip() == "An awesome function"
if six.PY2:
signature = inspect.formatargspec(
*inspect.getargspec(wrapped_function_6))
else:
signature = inspect.formatargspec(
*inspect.getfullargspec(wrapped_function_6))
assert signature == "(data, wcs=None, unit=None)"
def test_setup_failures1():
# repack but no returns
with pytest.raises(ValueError):
support_nddata(repack=True)
def test_setup_failures2():
# returns but no repack
with pytest.raises(ValueError):
support_nddata(returns=['data'])
def test_setup_failures9():
# keeps but no repack
with pytest.raises(ValueError):
support_nddata(keeps=['unit'])
def test_setup_failures3():
# same attribute in keeps and returns
with pytest.raises(ValueError):
support_nddata(repack=True, keeps=['mask'], returns=['data', 'mask'])
def test_setup_failures4():
# function accepts *args
with pytest.raises(ValueError):
@support_nddata
def test(data, *args):
pass
def test_setup_failures10():
# function accepts **kwargs
with pytest.raises(ValueError):
@support_nddata
def test(data, **kwargs):
pass
def test_setup_failures5():
# function accepts *args (or **kwargs)
with pytest.raises(ValueError):
@support_nddata
def test(data, *args):
pass
def test_setup_failures6():
# First argument is not data
with pytest.raises(ValueError):
@support_nddata
def test(img):
pass
def test_setup_failures7():
# accepts CCDData but was given just an NDData
with pytest.raises(TypeError):
@support_nddata(accepts=CCDData)
def test(data):
pass
test(NDData(np.ones((3, 3))))
def test_setup_failures8():
# function returns a different amount of arguments than specified. Using
# NDData here so we don't get into troubles when creating a CCDData without
# unit!
with pytest.raises(ValueError):
@support_nddata(repack=True, returns=['data', 'mask'])
def test(data):
return 10
test(NDData(np.ones((3, 3)))) # do NOT use CCDData here.
def test_setup_failures11():
# function accepts no arguments
with pytest.raises(ValueError):
@support_nddata
def test():
pass
def test_setup_numpyarray_default():
# It should be possible (even if it's not advisable to use mutable
# defaults) to have a numpy array as default value.
@support_nddata
def func(data, wcs=np.array([1, 2, 3])):
return wcs
def test_still_accepts_other_input():
@support_nddata(repack=True, returns=['data'])
def test(data):
return data
assert isinstance(test(NDData(np.ones((3, 3)))), NDData)
assert isinstance(test(10), int)
assert isinstance(test([1, 2, 3]), list)
def test_accepting_property_normal():
# Accepts a mask attribute and takes it from the input
@support_nddata
def test(data, mask=None):
return mask
ndd = NDData(np.ones((3, 3)))
assert test(ndd) is None
ndd._mask = np.zeros((3, 3))
assert np.all(test(ndd) == 0)
# Use the explicitly given one (raises a Warning)
with catch_warnings(AstropyUserWarning) as w:
assert test(ndd, mask=10) == 10
assert len(w) == 1
def test_parameter_default_identical_to_explicit_passed_argument():
# If the default is identical to the explicitly passed argument this
# should still raise a Warning and use the explicit one.
@support_nddata
def func(data, wcs=[1, 2, 3]):
return wcs
with catch_warnings(AstropyUserWarning) as w:
assert func(NDData(1, wcs=[1, 2]), [1, 2, 3]) == [1, 2, 3]
assert len(w) == 1
with catch_warnings(AstropyUserWarning) as w:
assert func(NDData(1, wcs=[1, 2])) == [1, 2]
assert len(w) == 0
def test_accepting_property_notexist():
# Accepts flags attribute but NDData doesn't have one
@support_nddata
def test(data, flags=10):
return flags
ndd = NDData(np.ones((3, 3)))
test(ndd)
def test_accepting_property_translated():
# Accepts a error attribute and we want to pass in uncertainty!
@support_nddata(mask='masked')
def test(data, masked=None):
return masked
ndd = NDData(np.ones((3, 3)))
assert test(ndd) is None
ndd._mask = np.zeros((3, 3))
assert np.all(test(ndd) == 0)
# Use the explicitly given one (raises a Warning)
with catch_warnings(AstropyUserWarning) as w:
assert test(ndd, masked=10) == 10
assert len(w) == 1
def test_accepting_property_meta_empty():
# Meta is always set (OrderedDict) so it has a special case that it's
# ignored if it's empty but not None
@support_nddata
def test(data, meta=None):
return meta
ndd = NDData(np.ones((3, 3)))
assert test(ndd) is None
ndd._meta = {'a': 10}
assert test(ndd) == {'a': 10}
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