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"""
Test functions in bioblend.galaxy.tool_dependencies
"""
from . import (
GalaxyTestBase,
test_util,
)
class TestGalaxyToolDependencies(GalaxyTestBase.GalaxyTestBase):
@test_util.skip_unless_galaxy("release_20.01")
def test_summarize_toolbox(self):
toolbox_summary = self.gi.tool_dependencies.summarize_toolbox()
assert isinstance(toolbox_summary, list)
assert len(toolbox_summary) > 0
toolbox_summary_by_tool = self.gi.tool_dependencies.summarize_toolbox(index_by="tools")
assert isinstance(toolbox_summary_by_tool, list)
assert len(toolbox_summary_by_tool) > 0
assert isinstance(toolbox_summary_by_tool[0], dict)
assert "tool_ids" in toolbox_summary_by_tool[0]
assert isinstance(toolbox_summary_by_tool[0]["tool_ids"], list)
tool_id = toolbox_summary_by_tool[0]["tool_ids"][0]
toolbox_summary_select_tool_ids = self.gi.tool_dependencies.summarize_toolbox(
index_by="tools", tool_ids=[tool_id]
)
assert isinstance(toolbox_summary_select_tool_ids, list)
assert len(toolbox_summary_select_tool_ids) == 1
assert toolbox_summary_select_tool_ids[0]["tool_ids"][0] == tool_id
@test_util.skip_unless_galaxy("release_20.01")
def test_unused_dependency_paths(self):
unused_paths = self.gi.tool_dependencies.unused_dependency_paths()
assert isinstance(unused_paths, list)
@test_util.skip_unless_galaxy("release_20.01")
def test_delete_unused_dependency_paths(self):
self.gi.tool_dependencies.delete_unused_dependency_paths(paths=[])
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