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#!/usr/bin/env python
"""Wrapper around pytest to execute the bioblend Galaxy test suite against fixed instance.
By default all Galaxy tests will run but a smaller subset can be executed by setting
the environment variable ``BIOBLEND_TEST_SUITE`` to ``quick``.
"""
import os
import sys
from typing import (
List,
NoReturn,
Optional,
)
try:
import pytest
except ImportError:
pytest = None
DIRECTORY = os.path.abspath(os.path.dirname(__file__))
BIOBLEND_TEST_SUITE = os.environ.get("BIOBLEND_TEST_SUITE", "full")
quick_tests = [
"TestGalaxyRoles.py",
"TestGalaxyRoles.py",
"TestGalaxyUsers.py",
"TestGalaxyToolData.py",
"TestGalaxyTools.py::TestGalaxyTools::test_get_tools", # Test single upload command.
]
def main(args: Optional[List[str]] = None) -> NoReturn:
"""Entry point that delegates to pytest.main."""
if pytest is None:
raise Exception("pytest is required to use this script.")
if args is None:
args = sys.argv[1:]
if len(args) < 2:
if BIOBLEND_TEST_SUITE == "full":
args.append(os.path.join(DIRECTORY))
else:
for quick_test in quick_tests:
args.append(os.path.join(DIRECTORY, quick_test))
sys.exit(pytest.main(args))
if __name__ == "__main__":
main()
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