1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38
|
from .assembly import assemblies_available, assembly_info
from .bed import to_bed
from .fileops import (
load_fasta,
read_alignments,
read_bam,
read_bigbed,
read_bigwig,
read_chromsizes,
read_pairix,
read_tabix,
read_table,
to_bigbed,
to_bigwig,
)
from .resources import UCSCClient, fetch_centromeres, fetch_chromsizes
from .schemas import SCHEMAS
__all__ = [
"assemblies_available",
"assembly_info",
"read_table",
"read_chromsizes",
"read_tabix",
"read_pairix",
"read_bam",
"read_alignments",
"load_fasta",
"read_bigwig",
"to_bed",
"to_bigwig",
"read_bigbed",
"to_bigbed",
"UCSCClient",
"fetch_centromeres",
"fetch_chromsizes",
"SCHEMAS",
]
|