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<HTML>
<HEAD>
<TITLE>BLAST Search Results </TITLE>
</HEAD>
<BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#660099">
<A HREF="http://www.ncbi.nlm.nih.gov/BLAST/blast_form.map"> <IMG SRC="http://www.ncbi.nlm.nih.gov/BLAST/blast_results.gif" BORDER=0 ISMAP></A>
<BR><BR><PRE>
<b>BLASTN 2.0.10 [Aug-26-1999]</b>
<b><a href="http://www.ncbi.nlm.nih.gov/htbin-
post/Entrez/query?uid=9254694&form=6&db=m&Dopt=r">Reference</a>:</b>
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
<p>
<b>Query=</b> gi|1347201|gb|G24969.1|G24969 human STS EST21946.
(331 letters)
<b>Database:</b> Non-redundant Database of GenBank STS Division
89,405 sequences; 32,867,852 total letters
<p> <p>If you have any problems or questions with the results of this search <br>please refer to the <b><a href=http://www.ncbi.nlm.nih.gov/BLAST/blast_FAQs.html>BLAST FAQs</a></b><br><p>
<FORM NAME="BLASTFORM">
</PRE>
<CENTER>
<H3><a href="/BLAST/newoptions.html#graphical-overview"> Distribution of 9 Blast Hits on the Query Sequence</a></H3>
<input name=defline size=80 value="Mouse-over to show defline and scores. Click to show alignments">
</CENTER>
<map name=img_map>
<area shape=rect coords=69,101,523,106 href="#1347201" ONMOUSEOVER='document.BLASTFORM.defline.value="G24969 human STS EST21946. gi|1375315|gb|G27065|G27065 human STS..S= 656 E=0.0"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=237,108,259,113 href="#2665277" ONMOUSEOVER='document.BLASTFORM.defline.value="AL010115 H.sapiens flow-sorted chromosome 1 HindIII fragment, SC..S=34.2 E=0.50"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=132,108,153,113 href="#1342139" ONMOUSEOVER='document.BLASTFORM.defline.value="G21813 human STS WI-12408...S=32.2 E=2.0"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=133,115,154,120 href="#4493602" ONMOUSEOVER='document.BLASTFORM.defline.value="G47248 Z17392_1 Zebrafish AB Danio rerio STS genomic clone Z17392..S=32.2 E=2.0"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=201,108,221,113 href="#1235411" ONMOUSEOVER='document.BLASTFORM.defline.value="Z53965 H.sapiens (D2S2321) DNA segment containing (CA) repeat; cl..S=32.2 E=2.0"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=204,115,224,120 href="#6120731" ONMOUSEOVER='document.BLASTFORM.defline.value="G55412 SHGC-100745 Human Homo sapiens STS genomic, sequence tagge..S=32.2 E=2.0"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=205,122,226,127 href="#939357" ONMOUSEOVER='document.BLASTFORM.defline.value="G08807 human STS CHLC.GATA70E11.P18111 clone GATA70E11..S=32.2 E=2.0"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=221,129,253,134 href="#4757440" ONMOUSEOVER='document.BLASTFORM.defline.value="G49267 stbK343C1_96809 chromosome 22 genomic clone Homo sapiens S..S=32.2 E=2.0"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=461,108,482,113 href="#719782" ONMOUSEOVER='document.BLASTFORM.defline.value="G02824 human STS WI-1312...S=32.2 E=2.0"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
</map>
<CENTER>
<IMG WIDTH=529 HEIGHT=136 USEMAP=#img_map BORDER=1 SRC="nph-getgif.cgi?iblast0&207891705326625.gif" ISMAP></CENTER>
<HR>
<PRE>
<PRE>
<a name = 1347201> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=01347201&dopt=GenBank">gb|G24969|G24969</a> human STS EST21946. >gi|1375315|gb|G27065|G27065 human STS
SHGC-31731.
Length = 331
Score = 656 bits (331), Expect = 0.0
Identities = 331/331 (100%)
Strand = Plus / Plus
Query: 1 cctccaccctctcatgagcaacaggatatgtgaaagtacttgcagccagaagcaaaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctccaccctctcatgagcaacaggatatgtgaaagtacttgcagccagaagcaaaacca 60
Query: 61 caatcctcgggtgctagatggagctccccaaggagcagagaggaaaaggcaggaggagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caatcctcgggtgctagatggagctccccaaggagcagagaggaaaaggcaggaggagag 120
Query: 121 ggccaggcagcagggatggagactaagtttggcccaaggctgcccgcaagcactgatgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggccaggcagcagggatggagactaagtttggcccaaggctgcccgcaagcactgatgcc 180
Query: 181 atcatgccctctggtaggtgtctatttctgtctgaaccagaaatacaccaagctccacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcatgccctctggtaggtgtctatttctgtctgaaccagaaatacaccaagctccacac 240
Query: 241 atgggggctttgctggcttcgacatcactggttcaactatgtcactgctttgttatattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgggggctttgctggcttcgacatcactggttcaactatgtcactgctttgttatattt 300
Query: 301 agtgctccagaacctcaggttccttcagatt 331
|||||||||||||||||||||||||||||||
Sbjct: 301 agtgctccagaacctcaggttccttcagatt 331
</PRE>
<PRE>
<a name = 2665277> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=02665277&dopt=GenBank">emb|AL010115|HSPE77H4</a> H.sapiens flow-sorted chromosome 1 HindIII fragment, SC1pE77H4,
sequence tagged site [Homo sapiens]
Length = 554
Score = 34.2 bits (17), Expect = 0.50
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 123 ccaggcagcagggatgg 139
|||||||||||||||||
Sbjct: 434 ccaggcagcagggatgg 418
</PRE>
<PRE>
<a name = 4757440> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=04757440&dopt=GenBank">gb|G49267.1|G49267</a> stbK343C1_96809 chromosome 22 genomic clone Homo sapiens STS
genomic clone 343C1, sequence tagged site
Length = 360
Score = 32.2 bits (16), Expect = 2.0
Identities = 22/24 (91%)
Strand = Plus / Minus
Query: 112 ggaggagagggccaggcagcaggg 135
||||||||||| | ||||||||||
Sbjct: 287 ggaggagaggggctggcagcaggg 264
</PRE>
<PRE>
<a name = 4493602> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=04493602&dopt=GenBank">gb|G47248.1|G47248</a> Z17392_1 Zebrafish AB Danio rerio STS genomic clone Z17392 5',
sequence tagged site
Length = 454
Score = 32.2 bits (16), Expect = 2.0
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 48 agaagcaaaaccacaa 63
||||||||||||||||
Sbjct: 434 agaagcaaaaccacaa 449
</PRE>
<PRE>
<a name = 6120731> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=06120731&dopt=GenBank">gb|G55412.1|G55412</a> SHGC-100745 Human Homo sapiens STS genomic, sequence tagged site
Length = 652
Score = 32.2 bits (16), Expect = 2.0
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 99 agaggaaaaggcagga 114
||||||||||||||||
Sbjct: 431 agaggaaaaggcagga 416
</PRE>
<PRE>
<a name = 1235411> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=01235411&dopt=GenBank">emb|Z53965|HSC009WH1</a> H.sapiens (D2S2321) DNA segment containing (CA) repeat; clone
AFMc009wh1; single read, sequence tagged site [Homo
sapiens]
Length = 382
Score = 32.2 bits (16), Expect = 2.0
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 97 agagaggaaaaggcag 112
||||||||||||||||
Sbjct: 107 agagaggaaaaggcag 122
</PRE>
<PRE>
<a name = 939357> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00939357&dopt=GenBank">gb|G08807|G08807</a> human STS CHLC.GATA70E11.P18111 clone GATA70E11
Length = 643
Score = 32.2 bits (16), Expect = 2.0
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 100 gaggaaaaggcaggag 115
||||||||||||||||
Sbjct: 482 gaggaaaaggcaggag 467
</PRE>
<PRE>
<a name = 1342139> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=01342139&dopt=GenBank">gb|G21813|G21813</a> human STS WI-12408.
Length = 418
Score = 32.2 bits (16), Expect = 2.0
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 47 cagaagcaaaaccaca 62
||||||||||||||||
Sbjct: 193 cagaagcaaaaccaca 178
</PRE>
<PRE>
<a name = 719782> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00719782&dopt=GenBank">gb|G02824|G02824</a> human STS WI-1312.
Length = 349
Score = 32.2 bits (16), Expect = 2.0
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 286 tgctttgttatattta 301
||||||||||||||||
Sbjct: 111 tgctttgttatattta 126
</PRE>
<PRE>
Database: Non-redundant Database of GenBank STS Division
Posted date: Dec 18, 1999 7:45 PM
Number of letters in database: 32,867,852
Number of sequences in database: 89,405
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7042
Number of Sequences: 89405
Number of extensions: 7042
Number of successful extensions: 1951
Number of sequences better than 10.0: 13
length of query: 331
length of database: 32,867,852
effective HSP length: 17
effective length of query: 314
effective length of database: 31,347,967
effective search space: 9843261638
effective search space used: 9843261638
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 10 (19.8 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
</PRE>
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</HTML>
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