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<HTML>
<HEAD>
<TITLE>BLAST Search Results </TITLE>
</HEAD>
<BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#660099">
<A HREF="http://www.ncbi.nlm.nih.gov/BLAST/blast_form.map"> <IMG SRC="http://www.ncbi.nlm.nih.gov/BLAST/blast_results.gif" BORDER=0 ISMAP></A>
<BR><BR><PRE>
<b>BLASTP 2.0.10 [Aug-26-1999]</b>
<b><a href="http://www.ncbi.nlm.nih.gov/htbin-
post/Entrez/query?uid=9254694&form=6&db=m&Dopt=r">Reference</a>:</b>
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
<p>
<b>Query=</b> gi|114879|sp|P29247|BCPB_STRHY PHOSPHOENOLPYRUVATE
PHOSPHOMUTASE (PHOSPHOENOLPYRUVATE MUTASE) (PEP MUTASE).
(313 letters)
<b>Database:</b> Non-redundant SwissProt sequences
82,258 sequences; 29,652,561 total letters
<p> <p>If you have any problems or questions with the results of this search <br>please refer to the <b><a href=http://www.ncbi.nlm.nih.gov/BLAST/blast_FAQs.html>BLAST FAQs</a></b><br><p>
<PRE>
Score E
Sequences producing significant alignments: (bits) Value
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00114879&dopt=GenPept">sp|P29247|BCPB_STRHY</a> PHOSPHOENOLPYRUVATE PHOSPHOMUTASE (PHO... <a href = #114879>574</a> e-164
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00417464&dopt=GenPept">sp|P33182|PEPM_TETPY</a> PHOSPHOENOLPYRUVATE PHOSPHOMUTASE PREC... <a href = #417464>228</a> 2e-59
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01731059&dopt=GenPept">sp|P54528|YQIQ_BACSU</a> HYPOTHETICAL 33.1 KD PROTEIN IN MMGE-B... <a href = #1731059> 89</a> 2e-17
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00114878&dopt=GenPept">sp|P11435|BCPA_STRHY</a> CARBOXYVINYL-CARBOXYPHOSPHONATE PHOSPH... <a href = #114878> 64</a> 3e-10
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=02498805&dopt=GenPept">sp|Q56062|CPPM_SALTY</a> PUTATIVE CARBOXYPHOSPHONOENOLPYRUVATE ... <a href = #2498805> 60</a> 7e-09
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=02498804&dopt=GenPept">sp|P77541|CPPM_ECOLI</a> PUTATIVE CARBOXYPHOSPHONOENOLPYRUVATE ... <a href = #2498804> 59</a> 1e-08
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00113033&dopt=GenPept">sp|P28240|ACEA_YEAST</a> ISOCITRATE LYASE (ISOCITRASE) (ISOCITR... <a href = #113033> 32</a> 2.0
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00113025&dopt=GenPept">sp|P28298|ACEA_EMENI</a> ISOCITRATE LYASE (ISOCITRASE) (ISOCITR... <a href = #113025> 30</a> 5.8
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00113031&dopt=GenPept">sp|P28299|ACEA_NEUCR</a> ISOCITRATE LYASE (ISOCITRASE) (ISOCITR... <a href = #113031> 30</a> 7.6
<PRE>
<a name = 114879> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00114879&dopt=GenPept">sp|P29247|BCPB_STRHY</a> PHOSPHOENOLPYRUVATE PHOSPHOMUTASE (PHOSPHOENOLPYRUVATE MUTASE) (PEP
MUTASE)
Length = 313
Score = 574 bits (1463), Expect = e-164
Identities = 280/313 (89%), Positives = 280/313 (89%)
Query: 1 MNATEQAANGDRGTTRSAGGRLRYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLC 60
MNATEQAANGDRGTTRSAGGRLRYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLC
Sbjct: 1 MNATEQAANGDRGTTRSAGGRLRYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLC 60
Query: 61 MSTARGVRDSDEASWTELLTLVGTMTDAVPGVPVLVDGDTGYGNFNTXXXXXXXXXXXXX 120
MSTARGVRDSDEASWTELLTLVGTMTDAVPGVPVLVDGDTGYGNFNT
Sbjct: 61 MSTARGVRDSDEASWTELLTLVGTMTDAVPGVPVLVDGDTGYGNFNTARRFAGRAERVGA 120
Query: 121 XXVCFEDKVFPKMNSFFGDGHQLAPVAEFCGKIRACKDAQRDPDFVVVARTEALISKLPM 180
VCFEDKVFPKMNSFFGDGHQLAPVAEFCGKIRACKDAQRDPDFVVVARTEALISKLPM
Sbjct: 121 AGVCFEDKVFPKMNSFFGDGHQLAPVAEFCGKIRACKDAQRDPDFVVVARTEALISKLPM 180
Query: 181 XXXXXXXXXXXXXXXXXXFIHSRMNTPQQIATFMERWEGSTPVLIAPTTYHTPSVDDFAA 240
FIHSRMNTPQQIATFMERWEGSTPVLIAPTTYHTPSVDDFAA
Sbjct: 181 EEALDRAAAYAEAGADALFIHSRMNTPQQIATFMERWEGSTPVLIAPTTYHTPSVDDFAA 240
Query: 241 LGIAGCIWANHSMRAAFAAMRDVCQRIRTDRGIYGIEDQVAPLKEIFGLFDYEGLEKDEN 300
LGIAGCIWANHSMRAAFAAMRDVCQRIRTDRGIYGIEDQVAPLKEIFGLFDYEGLEKDEN
Sbjct: 241 LGIAGCIWANHSMRAAFAAMRDVCQRIRTDRGIYGIEDQVAPLKEIFGLFDYEGLEKDEN 300
Query: 301 CYTQAPDLAAVQG 313
CYTQAPDLAAVQG
Sbjct: 301 CYTQAPDLAAVQG 313
</PRE>
<PRE>
<a name = 417464> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00417464&dopt=GenPept">sp|P33182|PEPM_TETPY</a> PHOSPHOENOLPYRUVATE PHOSPHOMUTASE PRECURSOR (PHOSPHOENOLPYRUVATE
MUTASE) (PEP MUTASE)
Length = 300
Score = 228 bits (574), Expect = 2e-59
Identities = 114/283 (40%), Positives = 164/283 (57%), Gaps = 2/283 (0%)
Query: 21 RLRYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLCMSTARGVRDSDEASWTELLT 80
+L+ ++ + +M H+GLSA I GF+ +W SGL +S A GVRDS+EAS+T++L
Sbjct: 18 QLKNMIQSKDLSFIMEAHNGLSAAIVEETGFKGIWGSGLSISAAMGVRDSNEASYTQVLE 77
Query: 81 LVGTMTDAVPGVPVLVDGDTGYGNFNTXXXXXXXXXXXXXXXVCFEDKVFPKMNSFFGDG 140
++ M+D +P+L+DGDTGYGN+N VC EDK+FPK NS DG
Sbjct: 78 VLEFMSDRTK-IPILLDGDTGYGNYNNARRLVKKLEQRSIAGVCLEDKIFPKRNSLLDDG 136
Query: 141 HQ-LAPVAEFCGKIRACKDAQRDPDFVVVARTEALISKLPMXXXXXXXXXXXXXXXXXXF 199
Q LAP+ EF KI+ACKD Q+D DF VVAR EA I+ +
Sbjct: 137 RQELAPINEFVAKIKACKDTQQDADFQVVARVEAFIAGWGLEEALKRAEAYRNAGADAIL 196
Query: 200 IHSRMNTPQQIATFMERWEGSTPVLIAPTTYHTPSVDDFAALGIAGCIWANHSMRAAFAA 259
+HS++ P +I FM+ W+ +PV+I PT YHT D F G+ IWANH+MRA +A
Sbjct: 197 MHSKLKEPSEIEAFMKEWKNRSPVIIVPTNYHTVPTDTFRKWGVNMVIWANHNMRACVSA 256
Query: 260 MRDVCQRIRTDRGIYGIEDQVAPLKEIFGLFDYEGLEKDENCY 302
M++ +RI D + +E +VA +KE+F L + L++ + Y
Sbjct: 257 MQETSRRIYEDESLVNVEPKVAKVKEVFRLQGEDELKQADKKY 299
</PRE>
<PRE>
<a name = 1731059> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01731059&dopt=GenPept">sp|P54528|YQIQ_BACSU</a> HYPOTHETICAL 33.1 KD PROTEIN IN MMGE-BFMBAA INTERGENIC REGION
Length = 301
Score = 88.5 bits (216), Expect = 2e-17
Identities = 79/289 (27%), Positives = 120/289 (41%), Gaps = 24/289 (8%)
Query: 20 GRLRYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLCMSTARGVRDSDEASWTELL 79
GR R L+ AP Q+ G HDG++A +A GF A++ SG + +RG+ D + E+
Sbjct: 16 GRFRKLMSAPDILQIPGAHDGMAALLAKEAGFSAIYLSGAAYTASRGLPDLGIITSAEIA 75
Query: 80 TLVGTMTDAVPGVPVLVDGDTGYGNFNTXXXXXXXXXXXXXXXVCFEDKVFPKMNSFFGD 139
+ A +P+LVD DTG+G V ED+ PK +
Sbjct: 76 ERAKDLVRAA-DLPLLVDIDTGFGGVLNAARTAREMLEARVAAVQMEDQQLPKKCGHL-N 133
Query: 140 GHQLAPVAEFCGKIRACKDAQRDPDFVVVARTEALISKLPMXXXXXXXXXXXXXXXXXXF 199
G QL P+ E KI+A K A P +VVART+A +
Sbjct: 134 GKQLVPIKEMAQKIKAIKQAA--PSLIVVARTDARAQE--GLDAAIKRSEAYIEAGADAI 189
Query: 200 IHSRMNTPQQIATFMERWEGSTPVLIAPTTY-HTP--SVDDFAALGIAGCIWANHSMRAA 256
+ + F ER P+L T + TP D+F +G I+ S+RAA
Sbjct: 190 FPEALQAENEFRQFAERI--PVPLLANMTEFGKTPYYRADEFEDMGFHMVIYPVTSLRAA 247
Query: 257 FAAMRDVCQRI--------RTDRGIYGIEDQVAPLKEIFGLFDYEGLEK 297
A C+R+ G++ ++ + L + +DYE L+K
Sbjct: 248 AKA----CERMFGLMKEHGSQKEGLHDMQTR-KELYDTISYYDYEALDK 291
</PRE>
<PRE>
<a name = 114878> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00114878&dopt=GenPept">sp|P11435|BCPA_STRHY</a> CARBOXYVINYL-CARBOXYPHOSPHONATE PHOSPHORYLMUTASE
(CARBOXYPHOSPHONOENOLPYRUVATE PHOSPHONOMUTASE) (CPEP
PHOSPHONOMUTASE)
Length = 295
Score = 64.4 bits (154), Expect = 3e-10
Identities = 47/152 (30%), Positives = 71/152 (45%), Gaps = 3/152 (1%)
Query: 23 RYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLCMSTAR-GVRDSDEASWTELLTL 81
R L++AP + +D LSA++ GF A+ +G S + G+ D S +E
Sbjct: 10 RELMNAPEILVVPSAYDALSAKVIQQAGFPAVHMTGSGTSASMLGLPDLGFTSVSEQAIN 69
Query: 82 VGTMTDAVPGVPVLVDGDTGYGNFNTXXXXXXXXXXXXXXXVCFEDKVFPKMNSFFGDGH 141
+ + V VPV++D D GYGN + ED+V PK +G
Sbjct: 70 LKNIVLTVD-VPVIMDADAGYGNAMSVWRATREFERVGIVGYHLEDQVNPKRCGHL-EGK 127
Query: 142 QLAPVAEFCGKIRACKDAQRDPDFVVVARTEA 173
+L E GKI A +A+ D DF ++ART+A
Sbjct: 128 RLISTEEMTGKIEAAVEAREDEDFTIIARTDA 159
</PRE>
<PRE>
<a name = 2498805> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=02498805&dopt=GenPept">sp|Q56062|CPPM_SALTY</a> PUTATIVE CARBOXYPHOSPHONOENOLPYRUVATE PHOSPHONOMUTASE (CPEP
PHOSPHONOMUTASE)
Length = 295
Score = 59.7 bits (142), Expect = 7e-09
Identities = 49/165 (29%), Positives = 80/165 (47%), Gaps = 14/165 (8%)
Query: 17 SAGGRLRYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLCMSTAR-GVRDSDEASW 75
S G R L Q++G + A +A G++A++ SG ++ G+ D ++
Sbjct: 5 SPGQAFRAALAKENPLQIVGAINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTL 64
Query: 76 TELLTLVGTMTDAVPGVPVLVDGDTGYGN--FNTXXXXXXXXXXXXXXXVCFEDKVFPKM 133
++LT + +TD P +P+LVD D G+G+ FN + ED+V K
Sbjct: 65 DDVLTDIRRITDVCP-LPLLVDADIGFGSSAFNVARTVKSIAKAGAAA-LHIEDQVGAKR 122
Query: 134 NSFFGDGHQ----LAPVAEFCGKIRACKDAQRDPDFVVVARTEAL 174
GH+ + E +IRA DA+ DP+FV++ART+AL
Sbjct: 123 C-----GHRPNKAIVSKEEMVDRIRAAVDARTDPNFVIMARTDAL 162
</PRE>
<PRE>
<a name = 2498804> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=02498804&dopt=GenPept">sp|P77541|CPPM_ECOLI</a> PUTATIVE CARBOXYPHOSPHONOENOLPYRUVATE PHOSPHONOMUTASE (CPEP
PHOSPHONOMUTASE)
Length = 296
Score = 58.9 bits (140), Expect = 1e-08
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 17 SAGGRLRYLLHAPGACQLMGVHDGLSARIAVAEGFEALWASGLCMSTAR-GVRDSDEASW 75
S G R L Q++G + A +A G++A++ SG ++ G+ D ++
Sbjct: 5 SPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTL 64
Query: 76 TELLTLVGTMTDAVPGVPVLVDGDTGYGN--FNTXXXXXXXXXXXXXXXVCFEDKVFPKM 133
++LT + +TD V +P+LVD D G+G+ FN + ED+V K
Sbjct: 65 DDVLTDIRRITD-VCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAG-LHIEDQVGAKR 122
Query: 134 NSFFGDGHQ----LAPVAEFCGKIRACKDAQRDPDFVVVARTEAL 174
GH+ + E +IRA DA+ DPDFV++ART+AL
Sbjct: 123 C-----GHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDAL 162
</PRE>
<PRE>
<a name = 113033> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00113033&dopt=GenPept">sp|P28240|ACEA_YEAST</a> ISOCITRATE LYASE (ISOCITRASE) (ISOCITRATASE) (ICL)
Length = 557
Score = 31.7 bits (70), Expect = 2.0
Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
Query: 93 PVLVDGDTGYGNFNTXXXXXXXXXXXXXXXVCFEDKVFPKMNSFFGDGHQLAPVAEFCGK 152
P++ D D G+G + ED+ G + PV E +
Sbjct: 175 PIVADADAGHGGLTAVFKLTKMFIERGAAGIHMEDQTSTNKKCGHMAGRCVIPVQEHVNR 234
Query: 153 ---IRACKDAQRDPDFVVVARTEA 173
IR C D D +VVART++
Sbjct: 235 LVTIRMCADIMHS-DLIVVARTDS 257
</PRE>
<PRE>
<a name = 113025> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00113025&dopt=GenPept">sp|P28298|ACEA_EMENI</a> ISOCITRATE LYASE (ISOCITRASE) (ISOCITRATASE) (ICL)
Length = 536
Score = 30.1 bits (66), Expect = 5.8
Identities = 20/84 (23%), Positives = 34/84 (39%), Gaps = 4/84 (4%)
Query: 93 PVLVDGDTGYGNFNTXXXXXXXXXXXXXXXVCFEDKVFPKMNSFFGDGHQLAPVAEFCGK 152
P++ D DTG+G + ED+ G L P++E +
Sbjct: 162 PIIADADTGHGGLTAVMKLTKLFVERGAAGIHIEDQAPGTKKCGHMAGKVLVPISEHINR 221
Query: 153 IRACKDAQRD---PDFVVVARTEA 173
+ A + AQ D D + +ART++
Sbjct: 222 LVAIR-AQADIMGTDLLAIARTDS 244
</PRE>
<PRE>
<a name = 113031> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00113031&dopt=GenPept">sp|P28299|ACEA_NEUCR</a> ISOCITRATE LYASE (ISOCITRASE) (ISOCITRATASE) (ICL)
Length = 547
Score = 29.7 bits (65), Expect = 7.6
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 93 PVLVDGDTGYGNFNTXXXXXXXXXXXXXXXVCFEDKVFPKMNSFFGDGHQLAPVAEFCGK 152
P++ D DTG+G + ED+ G L P+ E +
Sbjct: 173 PIVADADTGHGGLTAVMKLTKLFIEKGAAGIHIEDQAPGTKKCGHMAGKVLVPIQEHINR 232
Query: 153 IRACKDAQRD---PDFVVVARTEA 173
+ A + AQ D D + +ART+A
Sbjct: 233 LVAIR-AQADIMGSDLLCIARTDA 255
</PRE>
<PRE>
Database: Non-redundant SwissProt sequences
Posted date: Dec 28, 1999 4:33 PM
Number of letters in database: 29,652,561
Number of sequences in database: 82,258
Lambda K H
0.322 0.137 0.422
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17065937
Number of Sequences: 82258
Number of extensions: 635594
Number of successful extensions: 1159
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1143
Number of HSP's gapped (non-prelim): 10
length of query: 313
length of database: 29,652,561
effective HSP length: 48
effective length of query: 265
effective length of database: 25,704,177
effective search space: 6811606905
effective search space used: 6811606905
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 65 (29.7 bits)
</PRE>
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