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<HTML>
<HEAD>
<TITLE>BLAST Search Results </TITLE>
</HEAD>
<BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#660099">
<A HREF="http://www.ncbi.nlm.nih.gov/BLAST/blast_form.map"> <IMG SRC="http://www.ncbi.nlm.nih.gov/BLAST/blast_results.gif" BORDER=0 ISMAP></A>
<BR><BR><PRE>
<b>BLASTP 2.0.10 [Aug-26-1999]</b>
<b><a href="http://www.ncbi.nlm.nih.gov/htbin-
post/Entrez/query?uid=9254694&form=6&db=m&Dopt=r">Reference</a>:</b>
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
<p>
<b>Query=</b> gi|128372|sp|P04846|NLPA_ECOLI LIPOPROTEIN-28 PRECURSOR.
(272 letters)
<b>Database:</b> Non-redundant SwissProt sequences
82,258 sequences; 29,652,561 total letters
<p> <p>If you have any problems or questions with the results of this search <br>please refer to the <b><a href=http://www.ncbi.nlm.nih.gov/BLAST/blast_FAQs.html>BLAST FAQs</a></b><br><p>
<FORM NAME="BLASTFORM">
</PRE>
<CENTER>
<H3><a href="/BLAST/newoptions.html#graphical-overview"> Distribution of 9 Blast Hits on the Query Sequence</a></H3>
<input name=defline size=80 value="Mouse-over to show defline and scores. Click to show alignments">
</CENTER>
<map name=img_map>
<area shape=rect coords=107,101,523,106 href="#128372" ONMOUSEOVER='document.BLASTFORM.defline.value="P04846 LIPOPROTEIN-28 PRECURSOR..S= 439 E=3e-123"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=107,108,523,113 href="#401469" ONMOUSEOVER='document.BLASTFORM.defline.value="P28635 HYPOTHETICAL 29.4 KD LIPOPROTEIN IN RCSF-ABC INTERGENIC ..S= 291 E=1e-78"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=119,115,523,120 href="#1170788" ONMOUSEOVER='document.BLASTFORM.defline.value="Q08870 OUTER MEMBRANE LIPOPROTEIN 3 PRECURSOR (PLP3)..S= 226 E=4e-59"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=124,122,523,127 href="#1170786" ONMOUSEOVER='document.BLASTFORM.defline.value="Q08868 OUTER MEMBRANE LIPOPROTEIN 1 PRECURSOR (PLP1)..S= 219 E=4e-57"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=124,129,523,134 href="#1171732" ONMOUSEOVER='document.BLASTFORM.defline.value="P31728 28 KD OUTER MEMBRANE PROTEIN PRECURSOR..S= 218 E=8e-57"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=124,136,523,141 href="#1170787" ONMOUSEOVER='document.BLASTFORM.defline.value="Q08869 OUTER MEMBRANE LIPOPROTEIN 2 PRECURSOR (PLP2)..S= 206 E=3e-53"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=114,143,518,148 href="#1724004" ONMOUSEOVER='document.BLASTFORM.defline.value="P54594 HYPOTHETICAL 29.2 KD LIPOPROTEIN IN CSPB-GLPP INTERGENIC..S=77.3 E=3e-14"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=412,150,494,155 href="#1706875" ONMOUSEOVER='document.BLASTFORM.defline.value="P51887 FIBROMODULIN PRECURSOR (FM)..S=30.5 E=3.6"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=421,157,511,162 href="#1172496" ONMOUSEOVER='document.BLASTFORM.defline.value="P42499 PHYTOCHROME B..S=30.5 E=3.6"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
</map>
<CENTER>
<IMG WIDTH=529 HEIGHT=164 USEMAP=#img_map BORDER=1 SRC="nph-getgif.cgi?iblast0&207891705311784.gif" ISMAP></CENTER>
<HR>
<PRE>
<PRE>
blast_tmp 24 CDQSSSDAKHIKVGVINGAEQDXXXXXXXXXXXXYGLDVELVGFSGSLLPNDATNHGELD 83
<a name = 128372></a><a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00128372&dopt=GenPept>P04846</a> 24 CDQSSSDAKHIKVGVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELD 83
<a name = 401469></a><a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00401469&dopt=GenPept>P28635</a> 23 CGQDEKDPNHIKVGVIVGAEQQVAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDID 82
<a name = 1170788></a><a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01170788&dopt=GenPept>Q08870</a> 24 AEKLKVGVISGPEHKVMEVAAKIAKEKYNRDVELVVFTDYATPNAALDKGDLD 76
<a name = 1170786></a><a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01170786&dopt=GenPept>Q08868</a> 40 IKVGVMSGPEHTVAERAAQIAKEKYGLEVEFVLFNDYALPNTAVSKGDLD 89
<a name = 1171732></a><a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01171732&dopt=GenPept>P31728</a> 36 IKVGVMSGPEHQVAEIAAKVAKEKYGLDVQFVEFNDYALPNEAVSKGDLD 85
<a name = 1170787></a><a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01170787&dopt=GenPept>Q08869</a> 40 LKVGVMTGPEAQMTEVAVKIAKEKYGLDVELVQFTEYTQPNAALHSKDLD 89
<a name = 1724004></a><a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01724004&dopt=GenPept>P54594</a> 23 SAEHESIKIGI---AESDGAINYIAQKAEEAGLDIQLIPFSDYAESDIALANKEID 76
\
|
W
blast_tmp 84 ANVFQHRPFLEQDNQAHGYKLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNX 143
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00128372&dopt=GenPept>P04846</a> 84 ANVFQHRPFLEQDNQAHGYKLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNL 143
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00401469&dopt=GenPept>P28635</a> 83 ANAFQHKPYLDQQLKDRGYKLVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNL 142
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01170788&dopt=GenPept>Q08870</a> 77 LNAFQHKPYLDNQIQEKGYKLVPVGNTFVYPIAAYSKKIKSLAELKDGDTIAVPNDPTNL 136
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01170786&dopt=GenPept>Q08868</a> 90 ANAFQHKPYLDKDSQSKGLNLVIVGNTFVYPLAGYSKKVKNVSELAEGAVIAVPNDPSNL 150
\
|
N
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01171732&dopt=GenPept>P31728</a> 86 ANAMQHKPYLDEDAKAKNLNLVIVGNTFVYPLAGYSKKIKNVNELQDGAKVVVPNDPTNR 146
\
|
N
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01170787&dopt=GenPept>Q08869</a> 90 ANAFQTVPYLEQEVKDRGYKLAIIGNTLVWPIAAYSKKIKNISELKDGATVAIPNNASNT 149
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01724004&dopt=GenPept>P54594</a> 77 ANAFQTISYFQSFTEKYKLNLAPLGTTYITPMGIYSKRYERIRDISRGAVVSVPDKAFDF 136
blast_tmp 144 XXXXXXXXXXXXXXXXEGKGLLPTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIIS 203
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00128372&dopt=GenPept>P04846</a> 144 GRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIIS 203
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00401469&dopt=GenPept>P28635</a> 143 GRSLLLLQKVGLIKLKDGVGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVIN 202
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01170788&dopt=GenPept>Q08870</a> 137 ARALILLEKQDLIKLRADAGLKATSVDIIENPRKLVIQEIEAPLLPRTLDD--VAFSIIN 194
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01170786&dopt=GenPept>Q08868</a> 151 ARALILLEKQGLIKLKDNTNLFSTSVDIIENPKNLKIKEVDTSIAAKALDD--VDLAVVN 208
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01171732&dopt=GenPept>P31728</a> 147 GRALILLEKQGLIKLKDANNLLSTVLDIVENPKKLNITEVDTSVAARALDD--VDLAVVN 204
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01170787&dopt=GenPept>Q08869</a> 150 ARALLLLQAHGLLKLKDPKNVFATENDIIENPKNIKIVQADTSLLTRMLDD--VELAVIN 207
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01724004&dopt=GenPept>P54594</a> 137 GRALTVLQEAGLLTLKNGFNGTGSVDMIKDNPRHLKLKAVRQQDAV-----SGADVFVMK 191
blast_tmp 204 TTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETI 263
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00128372&dopt=GenPept>P04846</a> 204 TTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETI 263
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00401469&dopt=GenPept>P28635</a> 203 TTYASQIGLTPAKDGIFVEDKESPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKV 262
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01170788&dopt=GenPept>Q08870</a> 195 TTYAGQNGLTPTKDGIFVEDKDSPYVNLIVARENNQHSEAVKDLVKAYQTEEVYNKANEE 254
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01170786&dopt=GenPept>Q08868</a> 209 NTYAGQVGLNTQDHGVFVESKDSPYVNIIVARQDNKDAANVQNFIKSYQTEEVYQEAQKH 268
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01171732&dopt=GenPept>P31728</a> 205 NTYAGQVGLNAQDDGVFVEDKDSPYVNIIVSRTDNKDSKAVQDFIKSYQTEEVYQEAQKH 264
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01170787&dopt=GenPept>Q08869</a> 208 NTYAGQAGLSPDKDGIIVESKDSPYVNLVVSREDNKDDPRLQTFVKSFQTEEVFQEALKL 267
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01724004&dopt=GenPept>P54594</a> 192 PSEAKKAGLNPKKHTLKSGGMSEEEMNLIVVRAEDQDREALQTILELYQADDTAAFIEKE 252
\
|
L
<a name = 1706875></a><a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01706875&dopt=GenPept>P51887</a> 32 YMRQSRMSSYNYMPYYEDENSPYVYSYVPAPDTE-AEPVPEAQQSWQCPQ 82
\
|
AS
<a name = 1172496></a><a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01172496&dopt=GenPept>P42499</a> 690 GKSLVHDLVFKESEET--VNKLLSREEDKNVEKMRTFGKEHQN----KAAFLV 737
\
|
T
blast_tmp 264 FNGGAVPGW 272
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00128372&dopt=GenPept>P04846</a> 264 FNGGAVPGW 272
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00401469&dopt=GenPept>P28635</a> 263 FNGGAVKGW 271
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01170788&dopt=GenPept>Q08870</a> 255 FKGAMIKGW 263
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01170786&dopt=GenPept>Q08868</a> 269 FKDGVVKGW 277
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01171732&dopt=GenPept>P31728</a> 265 FKDGVVKGW 273
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01170787&dopt=GenPept>Q08869</a> 268 FNGGVVKGW 276
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01724004&dopt=GenPept>P54594</a> 253 YQGDLV 258
<a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01172496&dopt=GenPept>P42499</a> 738 VN 739
</PRE>
<PRE>
Database: Non-redundant SwissProt sequences
Posted date: Dec 28, 1999 4:33 PM
Number of letters in database: 29,652,561
Number of sequences in database: 82,258
Lambda K H
0.313 0.134 0.381
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12949026
Number of Sequences: 82258
Number of extensions: 482987
Number of successful extensions: 844
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 827
Number of HSP's gapped (non-prelim): 9
length of query: 272
length of database: 29,652,561
effective HSP length: 53
effective length of query: 219
effective length of database: 25,292,887
effective search space: 5539142253
effective search space used: 5539142253
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
</PRE>
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