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<p><!--
QBlastInfoBegin
Status=READY
QBlastInfoEnd
--><p><TITLE>Results for RID 984887321-25017-7612 </TITLE>
<HTML>
<HEAD>
<TITLE>BLAST Search Results </TITLE>
</HEAD>
<BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#660099">
<A HREF="http://www.ncbi.nlm.nih.gov/BLAST/blast_form.map"> <IMG SRC="http://www.ncbi.nlm.nih.gov/BLAST/blast_results.gif" BORDER=0 ISMAP></A>
<BR><BR><PRE>
<b>BLASTN 2.1.2 [Nov-13-2000]</b>
<b><a href="http://www.ncbi.nlm.nih.gov/htbin-
post/Entrez/query?uid=9254694&form=6&db=m&Dopt=r">Reference</a>:</b>
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
<p>
RID: 984887321-25017-7612
<p>
<p>
<b>Database:</b> nt
816,659 sequences; 2,928,690,202 total letters
<p> <p>If you have any problems or questions with the results of this search <br>please refer to the <b><a href=http://www.ncbi.nlm.nih.gov/blast/blast_FAQs.html>BLAST FAQs</a></b><br><p>
<FORM NAME="BLASTFORM" METHOD="POST">
<INPUT TYPE="hidden" NAME="PAGE" VALUE ="NUCLEOTIDES"><INPUT TYPE="hidden" NAME="EXPECT" VALUE ="10"><INPUT TYPE="hidden" NAME="DESCRIPTIONS" VALUE ="100"><INPUT TYPE="hidden" NAME="ALIGNMENTS" VALUE ="50"><INPUT TYPE="hidden" NAME="AUTO_FORMAT" VALUE ="yes"><a href="blast.cgi?RID=984887321-25017-7612&ALIGNMENT_VIEW=17" TARGET="Taxonomy BLAST Results for 984887321-25017-7612">Taxonomy reports</a>
<BR>
<b>Query=</b> gi|8332116|gb|BE037100.1|BE037100 MP14H09 MP
Mesembryanthemum crystallinum cDNA 5' similar to cold acclimation
protein, mRNA sequence
(1111 letters)
<PRE>
Score E
Sequences producing significant alignments: (bits) Value
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=10121840&dopt=GenBank">gb|AF283004.1|AF283004</a> Arabidopsis thaliana cold acclimatio... <a href = #10121840> 46</a> 0.042
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=06598567&dopt=GenBank">gb|AC006438.3|AC006438</a> Arabidopsis thaliana chromosome II s... <a href = #6598567> 46</a> 0.042
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=11127594&dopt=GenBank">dbj|AB044404.1|AB044404</a> Arabidopsis thaliana FL3-5A3 mRNA f... <a href = #11127594> 46</a> 0.042
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=04376087&dopt=GenBank">emb|Z99707.1|ATAP21</a> Arabidopsis thaliana DNA chromosome 4, ... <a href = #4376087> 44</a> 0.17
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=07270703&dopt=GenBank">emb|AL161591.2|ATCHRIV87</a> Arabidopsis thaliana DNA chromosom... <a href = #7270703> 44</a> 0.17
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=10121844&dopt=GenBank">gb|AF283006.1|AF283006</a> Oryza sativa cold acclimation protei... <a href = #10121844> 42</a> 0.66
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=11190569&dopt=GenBank">emb|AL359511.16|AL359511</a> Human DNA sequence from clone RP1-... <a href = #11190569> 42</a> 0.66
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12545282&dopt=GenBank">gb|AC008529.4|AC008529</a> Homo sapiens chromosome 5 clone CTC-... <a href = #12545282> 40</a> 2.6
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=10727724&dopt=GenBank">gb|AE003837.2|AE003837</a> Drosophila melanogaster genomic scaf... <a href = #10727724> 40</a> 2.6
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=10121842&dopt=GenBank">gb|AF283005.1|AF283005</a> Arabidopsis thaliana cold acclimatio... <a href = #10121842> 40</a> 2.6
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=04165334&dopt=GenBank">gb|AC006421.1|AC006421</a> Drosophila melanogaster, chromosome ... <a href = #4165334> 40</a> 2.6
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=04140591&dopt=GenBank">gb|AF087457.1|AF087457</a> Mesocricetus auratus N-acetylglucosa... <a href = #4140591> 40</a> 2.6
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=04140589&dopt=GenBank">gb|AF087456.1|AF087456</a> Mesocricetus auratus N-acetylglucosa... <a href = #4140589> 40</a> 2.6
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=01531640&dopt=GenBank">gb|U65792.1|CGU65792</a> Cricetulus griseus mutant N-acetylgluc... <a href = #1531640> 40</a> 2.6
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=01531638&dopt=GenBank">gb|U65791.1|CGU65791</a> Cricetulus griseus N-acetylglucoaminyl... <a href = #1531638> 40</a> 2.6
</PRE>
<CENTER><b><FONT color="green">Alignments</FONT></b></CENTER>
<PRE>
><a name = 10121840></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=10121840&dopt=GenBank">gb|AF283004.1|AF283004</a> Arabidopsis thaliana cold acclimation protein WCOR413-like protein
alpha form mRNA, complete cds
Length = 783
Score = 46.1 bits (23), Expect = 0.042
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 249 tacttgttgatattggatcgaacaaactggagaaccaacatgctcacgtcacttttagtc 308
||||||||| | ||||||||||| || |||| || || |||||||| |||||| | |
Sbjct: 237 tacttgttggtgttggatcgaaccaattggaagacgaatatgctcacatcacttctcatt 296
Query: 309 ccttacatattcctcagtcttcc 331
|||||||| ||| ||||||||||
Sbjct: 297 ccttacatcttcttcagtcttcc 319
</PRE>
<PRE>
><a name = 6598567></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=06598567&dopt=GenBank">gb|AC006438.3|AC006438</a> Arabidopsis thaliana chromosome II section 92 of 255 of the complete
sequence. Sequence from clones F19G14, F7H1
Length = 87803
Score = 46.1 bits (23), Expect = 0.042
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 249 tacttgttgatattggatcgaacaaactggagaaccaacatgctcacgtcacttttagtc 308
||||||||| | ||||||||||| || |||| || || |||||||| |||||| | |
Sbjct: 85104 tacttgttggtgttggatcgaaccaattggaagacgaatatgctcacatcacttctcatt 85163
Query: 309 ccttacatattcctcagtcttcc 331
|||||||| ||| ||||||||||
Sbjct: 85164 ccttacatcttcttcagtcttcc 85186
</PRE>
<PRE>
><a name = 11127594></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=11127594&dopt=GenBank">dbj|AB044404.1|AB044404</a> Arabidopsis thaliana FL3-5A3 mRNA for cold acclimation protein
homolog, complete cds
Length = 820
Score = 46.1 bits (23), Expect = 0.042
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 249 tacttgttgatattggatcgaacaaactggagaaccaacatgctcacgtcacttttagtc 308
||||||||| | ||||||||||| || |||| || || |||||||| |||||| | |
Sbjct: 244 tacttgttggtgttggatcgaaccaattggaagacgaatatgctcacatcacttctcatt 303
Query: 309 ccttacatattcctcagtcttcc 331
|||||||| ||| ||||||||||
Sbjct: 304 ccttacatcttcttcagtcttcc 326
</PRE>
<PRE>
><a name = 4376087></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=04376087&dopt=GenBank">emb|Z99707.1|ATAP21</a> Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 1
Length = 206420
Score = 44.1 bits (22), Expect = 0.17
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 253 tgttgatattggatcgaacaaactggagaaccaa 286
|||||||||||||||| || ||||||| ||||||
Sbjct: 52308 tgttgatattggatcgtaccaactggaaaaccaa 52275
</PRE>
<PRE>
><a name = 7270703></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=07270703&dopt=GenBank">emb|AL161591.2|ATCHRIV87</a> Arabidopsis thaliana DNA chromosome 4, contig fragment No. 87
Length = 196339
Score = 44.1 bits (22), Expect = 0.17
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 253 tgttgatattggatcgaacaaactggagaaccaa 286
|||||||||||||||| || ||||||| ||||||
Sbjct: 9146 tgttgatattggatcgtaccaactggaaaaccaa 9179
</PRE>
<PRE>
><a name = 10121844></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=10121844&dopt=GenBank">gb|AF283006.1|AF283006</a> Oryza sativa cold acclimation protein WCOR413-like protein mRNA,
complete cds
Length = 1057
Score = 42.1 bits (21), Expect = 0.66
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 256 tgatattggatcgaacaaactggagaaccaacatgct 292
||||||||||| | |||||||||| |||||||||||
Sbjct: 316 tgatattggataggacaaactggaagaccaacatgct 352
</PRE>
<PRE>
><a name = 11190569></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=11190569&dopt=GenBank">emb|AL359511.16|AL359511</a> Human DNA sequence from clone RP1-298M8 on chromosome 20, complete
sequence [Homo sapiens]
Length = 63264
Score = 42.1 bits (21), Expect = 0.66
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 61 agaaaatggggagagaaatga 81
|||||||||||||||||||||
Sbjct: 9450 agaaaatggggagagaaatga 9430
</PRE>
<PRE>
><a name = 12545282></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12545282&dopt=GenBank">gb|AC008529.4|AC008529</a> Homo sapiens chromosome 5 clone CTC-475P15, complete sequence
Length = 169557
Score = 40.1 bits (20), Expect = 2.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 207 ggcactcatttcctcaaatg 226
||||||||||||||||||||
Sbjct: 33167 ggcactcatttcctcaaatg 33186
</PRE>
<PRE>
><a name = 10727724></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=10727724&dopt=GenBank">gb|AE003837.2|AE003837</a> Drosophila melanogaster genomic scaffold 142000013386047 section 6 of
52, complete sequence
Length = 234905
Score = 40.1 bits (20), Expect = 2.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 156 gcaacaatgaggctcatcaa 175
||||||||||||||||||||
Sbjct: 20459 gcaacaatgaggctcatcaa 20478
</PRE>
<PRE>
><a name = 10121842></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=10121842&dopt=GenBank">gb|AF283005.1|AF283005</a> Arabidopsis thaliana cold acclimation protein WCOR413-like protein
beta form mRNA, complete cds
Length = 884
Score = 40.1 bits (20), Expect = 2.6
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 246 atttacttgttgatattggatcgaacaaactggagaaccaacatgctcacgtcact 301
||||||||||| || |||||||| || || |||| |||||| ||||| || |||||
Sbjct: 212 atttacttgttaattttggatcgtaccaattggaaaaccaagatgcttacatcact 267
</PRE>
<PRE>
><a name = 4165334></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=04165334&dopt=GenBank">gb|AC006421.1|AC006421</a> Drosophila melanogaster, chromosome 2R, region 44C1-44C5, P1 clones
DS08614 and DS00667, complete sequence
Length = 100575
Score = 40.1 bits (20), Expect = 2.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 156 gcaacaatgaggctcatcaa 175
||||||||||||||||||||
Sbjct: 8902 gcaacaatgaggctcatcaa 8921
</PRE>
<PRE>
><a name = 4140591></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=04140591&dopt=GenBank">gb|AF087457.1|AF087457</a> Mesocricetus auratus N-acetylglucosaminyltransferase I mutant mRNA,
complete cds
Length = 1344
Score = 40.1 bits (20), Expect = 2.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 462 ctggtggtggcaccagacttcttt 485
|||| |||||||||||||||||||
Sbjct: 640 ctggaggtggcaccagacttcttt 663
</PRE>
<PRE>
><a name = 4140589></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=04140589&dopt=GenBank">gb|AF087456.1|AF087456</a> Mesocricetus auratus N-acetylglucosaminyltransferase I mRNA,
complete cds
Length = 1344
Score = 40.1 bits (20), Expect = 2.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 462 ctggtggtggcaccagacttcttt 485
|||| |||||||||||||||||||
Sbjct: 640 ctggaggtggcaccagacttcttt 663
</PRE>
<PRE>
><a name = 1531640></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=01531640&dopt=GenBank">gb|U65792.1|CGU65792</a> Cricetulus griseus mutant N-acetylglucosaminyltransferase I mRNA,
complete cds
Length = 1344
Score = 40.1 bits (20), Expect = 2.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 462 ctggtggtggcaccagacttcttt 485
|||| |||||||||||||||||||
Sbjct: 640 ctggaggtggcaccagacttcttt 663
</PRE>
<PRE>
><a name = 1531638></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=01531638&dopt=GenBank">gb|U65791.1|CGU65791</a> Cricetulus griseus N-acetylglucoaminyltransferase I mRNA, complete
cds
Length = 1344
Score = 40.1 bits (20), Expect = 2.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 462 ctggtggtggcaccagacttcttt 485
|||| |||||||||||||||||||
Sbjct: 640 ctggaggtggcaccagacttcttt 663
</PRE>
<PRE>
Database: nt
Posted date: Mar 17, 2001 1:49 AM
Number of letters in database: 2,928,690,202
Number of sequences in database: 816,659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1106713
Number of Sequences: 816659
Number of extensions: 1106713
Number of successful extensions: 5784
Number of sequences better than 10.0: 15
length of query: 1111
length of database: 2,928,690,202
effective HSP length: 21
effective length of query: 1090
effective length of database: 2,911,540,363
effective search space: 3173578995670
effective search space used: 3173578995670
T: 0
A: 30
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
</PRE>
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