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<form action="Blast.cgi" enctype="application/x-www-form-urlencoded" method="POST" TARGET=""><input name="ALIGNMENTS" type="hidden" value="50"><input name="AUTO_FORMAT" type="hidden" value="on"><input name="CLIENT" type="hidden" value="web"><input name="DESCRIPTIONS" type="hidden" value="100"><input name="EXPECT" type="hidden" value="10"><input name="HITLIST_SIZE" type="hidden" value="500"><input name="I_THRESH" type="hidden" value="0.001"><input name="LAYOUT" type="hidden" value="OneWindow"><input name="NCBI_GI" type="hidden" value="checked"><input name="PAGE" type="hidden" value="Proteins"><input name="RID" type="hidden" value="991617086-13184-28031"><input name="RTOE" type="hidden" value="25"><input name="SHOW_OVERVIEW" type="hidden" value="checked"><input name="STEP_NUMBER" type="hidden" value="1"><input name="CMD" type="hidden" value="Put">
<p><!--
QBlastInfoBegin
Status=READY
QBlastInfoEnd
--><p><b>BLASTP 2.1.3 [Apr-11-2001]</b>
<pre>
<b><a href="http://www.ncbi.nlm.nih.gov/htbin-
post/Entrez/query?uid=9254694&form=6&db=m&Dopt=r">Reference</a>:</b>
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
<p>
RID: 991617086-13184-28031
<p>
<b>Query=</b> gi|1174726|sp|P12921|TMRB_BACSU TUNICAMYCIN RESISTANCE
PROTEIN
(197 letters)
<p>
<b>Database:</b> nr
693,878 sequences; 218,617,282 total letters
<p> <p>If you have any problems or questions with the results of this search <br>please refer to the <b><a href=http://www.ncbi.nlm.nih.gov/blast/blast_FAQs.html>BLAST FAQs</a></b><br><p>
<a href="Blast.cgi?CMD=Get&RID=991617086-13184-28031&FORMAT_OBJECT=TaxBlast" TARGET="Taxonomy BLAST Results for 991617086-13184-28031">Taxonomy reports</a>
<BR>
<PRE>
Score E
Sequences producing significant alignments: (bits) Value
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00216351&dopt=GenPept" >dbj|BAA02945.1|</a> (D13793) ORF [Bacillus subtilis] <a href = #216351>397</a> e-110
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00216350&dopt=GenPept" >dbj|BAA02944.1|</a> (D13793) ORF [Bacillus subtilis] >gi|226067... <a href = #216350>397</a> e-110
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00216352&dopt=GenPept" >dbj|BAA02946.1|</a> (D13793) ORF [Bacillus subtilis] <a href = #216352>397</a> e-110
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=07531279&dopt=GenPept" >sp|P12921|TMRB_BACSU</a> TUNICAMYCIN RESISTANCE PROTEIN >gi|742... <a href = #7531279>396</a> e-109
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=07481802&dopt=GenPept" >pir||T36076</a> tmrB-like protein - Streptomyces coelicolor >gi... <a href = #7481802>144</a> 1e-33
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=07471142&dopt=GenPept" >pir||F75399</a> antibiotic resistance protein - Deinococcus rad... <a href = #7471142>114</a> 1e-24
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00045945&dopt=GenPept" >emb|CAA31896.1|</a> (X13543) unidentified peptide (AA 1-92) (13... <a href = #45945> 90</a> 3e-17
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=08744968&dopt=GenPept" >emb|CAB95294.1|</a> (AL359779) putative bifunctional protein (A... <a href = #8744968> 87</a> 2e-16
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00423877&dopt=GenPept" >pir||S06033</a> hypothetical protein - Enterobacteriaceae plasm... <a href = #423877> 86</a> 5e-16
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=07479146&dopt=GenPept" >pir||T36817</a> ATP/GTP-binding protein - Streptomyces coelicol... <a href = #7479146> 86</a> 5e-16
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00423876&dopt=GenPept" >pir||S06031</a> hypothetical protein - Enterobacteriaceae plasm... <a href = #423876> 83</a> 4e-15
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00096587&dopt=GenPept" >pir||S06034</a> hypothetical protein - Klebsiella pneumoniae pl... <a href = #96587> 82</a> 9e-15
</PRE>
<CENTER><b><FONT color="green">Alignments</FONT></b></CENTER>
<PRE>
><a name = 216351></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00216351&dopt=GenPept" >dbj|BAA02945.1|</a> (D13793) ORF [Bacillus subtilis]
Length = 199
Score = 397 bits (1021), Expect = e-110
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRA 60
MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRA
Sbjct: 3 MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRA 62
Query: 61 FNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEGRIVHHFTLMASKETLLKRLR 120
FNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEGRIVHHFTLMASKETLLKRLR
Sbjct: 63 FNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEGRIVHHFTLMASKETLLKRLR 122
Query: 121 TRAEGKNSWAAKQIDRCVEGLSSPIFEDHIQTDNLSIQDVAENIAARAELPLDPDTRGSL 180
TRAEGKNSWAAKQIDRCVEGLSSPIFEDHIQTDNLSIQDVAENIAARAELPLDPDTRGSL
Sbjct: 123 TRAEGKNSWAAKQIDRCVEGLSSPIFEDHIQTDNLSIQDVAENIAARAELPLDPDTRGSL 182
Query: 181 RRFADRLMVKLNHIRIK 197
RRFADRLMVKLNHIRIK
Sbjct: 183 RRFADRLMVKLNHIRIK 199
</PRE>
<PRE>
><a name = 216350></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00216350&dopt=GenPept" >dbj|BAA02944.1|</a> (D13793) ORF [Bacillus subtilis]
<a name = 226067></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00226067&dopt=GenPept" >prf||1410166A</a> tunicamycin resistance gene tmrB [Escherichia coli]
Length = 206
Score = 397 bits (1021), Expect = e-110
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRA 60
MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRA
Sbjct: 10 MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRA 69
Query: 61 FNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEGRIVHHFTLMASKETLLKRLR 120
FNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEGRIVHHFTLMASKETLLKRLR
Sbjct: 70 FNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEGRIVHHFTLMASKETLLKRLR 129
Query: 121 TRAEGKNSWAAKQIDRCVEGLSSPIFEDHIQTDNLSIQDVAENIAARAELPLDPDTRGSL 180
TRAEGKNSWAAKQIDRCVEGLSSPIFEDHIQTDNLSIQDVAENIAARAELPLDPDTRGSL
Sbjct: 130 TRAEGKNSWAAKQIDRCVEGLSSPIFEDHIQTDNLSIQDVAENIAARAELPLDPDTRGSL 189
Query: 181 RRFADRLMVKLNHIRIK 197
RRFADRLMVKLNHIRIK
Sbjct: 190 RRFADRLMVKLNHIRIK 206
</PRE>
<PRE>
><a name = 216352></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00216352&dopt=GenPept" >dbj|BAA02946.1|</a> (D13793) ORF [Bacillus subtilis]
Length = 197
Score = 397 bits (1021), Expect = e-110
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRA 60
MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRA
Sbjct: 1 MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRA 60
Query: 61 FNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEGRIVHHFTLMASKETLLKRLR 120
FNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEGRIVHHFTLMASKETLLKRLR
Sbjct: 61 FNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEGRIVHHFTLMASKETLLKRLR 120
Query: 121 TRAEGKNSWAAKQIDRCVEGLSSPIFEDHIQTDNLSIQDVAENIAARAELPLDPDTRGSL 180
TRAEGKNSWAAKQIDRCVEGLSSPIFEDHIQTDNLSIQDVAENIAARAELPLDPDTRGSL
Sbjct: 121 TRAEGKNSWAAKQIDRCVEGLSSPIFEDHIQTDNLSIQDVAENIAARAELPLDPDTRGSL 180
Query: 181 RRFADRLMVKLNHIRIK 197
RRFADRLMVKLNHIRIK
Sbjct: 181 RRFADRLMVKLNHIRIK 197
</PRE>
<PRE>
><a name = 7531279></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=07531279&dopt=GenPept" >sp|P12921|TMRB_BACSU</a> TUNICAMYCIN RESISTANCE PROTEIN
<a name = 7428961></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=07428961&dopt=GenPept" >pir||YTBST</a> tunicamycin resistance protein - Bacillus subtilis
<a name = 1805386></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01805386&dopt=GenPept" >dbj|BAA08948.1|</a> (D50453) tunicamycin resistance protein [Bacillus subtilis]
<a name = 2632600></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=02632600&dopt=GenPept" >emb|CAB12108.1|</a> (Z99105) ATP-binding membrane protein [Bacillus subtilis]
Length = 197
Score = 396 bits (1018), Expect = e-109
Identities = 196/197 (99%), Positives = 197/197 (99%)
Query: 1 MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRA 60
MIIWINGAFGSGKTQTAFELHRRLNPSYVYDP+KMGFALRSMVPQEIAKDDFQSYPLWRA
Sbjct: 1 MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPQKMGFALRSMVPQEIAKDDFQSYPLWRA 60
Query: 61 FNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEGRIVHHFTLMASKETLLKRLR 120
FNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEGRIVHHFTLMASKETLLKRLR
Sbjct: 61 FNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEGRIVHHFTLMASKETLLKRLR 120
Query: 121 TRAEGKNSWAAKQIDRCVEGLSSPIFEDHIQTDNLSIQDVAENIAARAELPLDPDTRGSL 180
TRAEGKNSWAAKQIDRCVEGLSSPIFEDHIQTDNLSIQDVAENIAARAELPLDPDTRGSL
Sbjct: 121 TRAEGKNSWAAKQIDRCVEGLSSPIFEDHIQTDNLSIQDVAENIAARAELPLDPDTRGSL 180
Query: 181 RRFADRLMVKLNHIRIK 197
RRFADRLMVKLNHIRIK
Sbjct: 181 RRFADRLMVKLNHIRIK 197
</PRE>
<PRE>
><a name = 7481802></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=07481802&dopt=GenPept" >pir||T36076</a> tmrB-like protein - Streptomyces coelicolor
<a name = 4585834></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=04585834&dopt=GenPept" >emb|CAB40928.1|</a> (AL049630) TmrB-like protein [Streptomyces coelicolor A3(2)]
Length = 213
Score = 144 bits (363), Expect = 1e-33
Identities = 78/197 (39%), Positives = 112/197 (56%), Gaps = 18/197 (9%)
Query: 17 AFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRAFNYSLLASLTDTYRGI 76
A E+ RRL S V DPE GF LR M+P E+ ++DFQ WR +L + G+
Sbjct: 17 AHEIRRRLPGSVVCDPEHAGFGLRRMLPPEL-REDFQDLVSWRQGVVEVLDLALTRHDGV 75
Query: 77 LIVPMTIVHPEYFNEIIGRLRQEGRIVHHFTLMASKETLLKRLRTRAEG----------- 125
+I PMT+ P YF E +GRLR+ G VHHF+L+A++ET+L+RLR R G
Sbjct: 76 VIAPMTVTDPGYFAETVGRLRELGHDVHHFSLLAARETVLRRLRERGPGHALRYVTGKAG 135
Query: 126 ------KNSWAAKQIDRCVEGLSSPIFEDHIQTDNLSIQDVAENIAARAELPLDPDTRGS 179
+ SWA +Q+D C+E L+ P F +H+ TD+ ++ A+ IA A L L P+ G+
Sbjct: 136 QGSGPRRESWAVRQLDHCLERLAEPEFAEHLWTDHTTVPKTADRIAVLAGLTLKPNNEGA 195
Query: 180 LRRFADRLMVKLNHIRI 196
LR + V + HIR+
Sbjct: 196 LRTRMRQAGVGIRHIRV 212
</PRE>
<PRE>
><a name = 7471142></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=07471142&dopt=GenPept" >pir||F75399</a> antibiotic resistance protein - Deinococcus radiodurans (strain
R1)
<a name = 6459170></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=06459170&dopt=GenPept" >gb|AAF10983.1|AE001986_8</a> (AE001986) antibiotic resistance protein [Deinococcus radiodurans]
Length = 195
Score = 114 bits (286), Expect = 1e-24
Identities = 70/179 (39%), Positives = 95/179 (52%), Gaps = 4/179 (2%)
Query: 2 IIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRAF 61
IIWING FG GKT TA LH RL S+V++PE+MG ALR + P D Q +P+W
Sbjct: 8 IIWINGPFGVGKTHTAHTLHERLPGSFVFEPEEMGQALRKLTPG--FSGDPQEHPMWIPL 65
Query: 62 NYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEGRIVHHFTLMASKETLLKRLRT 121
L + G LIVP++I ++ L+ G VHHFTL+A +L+RL
Sbjct: 66 MLDALQYASREAAGPLIVPVSISDTARHRRLMSGLKDRGLSVHHFTLIAPLNVVLERL-- 123
Query: 122 RAEGKNSWAAKQIDRCVEGLSSPIFEDHIQTDNLSIQDVAENIAARAELPLDPDTRGSL 180
R +G+ ++ + L F+ HI T L Q VAE IAA+ L L P +G+L
Sbjct: 124 RRDGQPQVNVGTVEDRLNELRGEQFQTHIDTAGLGTQQVAEQIAAQVGLTLAPPPQGAL 182
</PRE>
<PRE>
><a name = 45945></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00045945&dopt=GenPept" >emb|CAA31896.1|</a> (X13543) unidentified peptide (AA 1-92) (1336 is 2nd base in
codon) [Enterobacteriaceae]
Length = 92
Score = 90.1 bits (222), Expect = 3e-17
Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 1 MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRA 60
MIIWING FG+GKT A L R + S ++DPE++GF ++ VP A D+Q PLWR
Sbjct: 1 MIIWINGPFGAGKTTLAERLRDRRSKSLIFDPEEIGFVVKETVPMP-ASGDYQDLPLWRG 59
Query: 61 FNYSLLASLTDTYRGILIVPMTIVHPEYFNEII 93
+ + + Y +I+PMT+VHP+Y EI+
Sbjct: 60 LTIAAVREIRRNYSQDIIIPMTLVHPDYLTEIL 92
</PRE>
<PRE>
><a name = 8744968></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=08744968&dopt=GenPept" >emb|CAB95294.1|</a> (AL359779) putative bifunctional protein (ATP/GTP binding
protein/MutT-like) [Streptomyces coelicolor A3(2)]
Length = 347
Score = 87.4 bits (215), Expect = 2e-16
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Query: 2 IIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKD--DFQSYPLWR 59
++WINGAFG+GKT TA EL + S ++DPE +G AL ++P + + DFQ P+WR
Sbjct: 3 VVWINGAFGAGKTTTARELIELIPNSTLFDPEVVGGALAHLLPPKRLAEVGDFQDLPIWR 62
Query: 60 AFNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEGRIVHHFTLMASKETLLKRL 119
A+L G L+VPMT++ EY +EI G L V H L ++ L +R+
Sbjct: 63 RLVIDTAAALLADLGGTLVVPMTLLRQEYRDEIFGGLAARRIEVRHILLAPAETILRERI 122
Query: 120 RTR 122
+R
Sbjct: 123 ASR 125
</PRE>
<PRE>
><a name = 423877></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00423877&dopt=GenPept" >pir||S06033</a> hypothetical protein - Enterobacteriaceae plasmid pWP14a
(fragment)
<a name = 45942></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00045942&dopt=GenPept" >emb|CAA31894.1|</a> (X13542) hypothetical protein [Plasmid pWP14a]
Length = 92
Score = 86.3 bits (212), Expect = 5e-16
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 1 MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRA 60
MIIWING FG+GKT A L R S ++DPE++GF ++ VP A D+Q PLWR
Sbjct: 1 MIIWINGPFGAGKTTLAERLRDRRPKSLIFDPEEIGFVVKETVPIP-ASGDYQDLPLWRG 59
Query: 61 FNYSLLASLTDTYRGILIVPMTIVHPEYFNEII 93
+ ++ + Y +I+PMT+V+P+Y EI+
Sbjct: 60 LTIAAVSEIRRNYSQDIIIPMTLVYPDYLTEIL 92
</PRE>
<PRE>
><a name = 7479146></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=07479146&dopt=GenPept" >pir||T36817</a> ATP/GTP-binding protein - Streptomyces coelicolor
<a name = 3581837></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=03581837&dopt=GenPept" >emb|CAA20793.1|</a> (AL031541) ATP/GTP binding protein [Streptomyces coelicolor A3(2)]
Length = 174
Score = 86.3 bits (212), Expect = 5e-16
Identities = 47/119 (39%), Positives = 64/119 (53%)
Query: 1 MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRA 60
MI+W+NG G+GKT T + R L S V+D EK+G L + P D+FQ + WR
Sbjct: 1 MIVWLNGTHGAGKTTTGALVQRLLPDSRVFDAEKVGETLMDITPGLPDTDNFQHWAPWRP 60
Query: 61 FNYSLLASLTDTYRGILIVPMTIVHPEYFNEIIGRLRQEGRIVHHFTLMASKETLLKRL 119
+ D G L++PMT++ EY+ EI G L G V HF L A +ETL R+
Sbjct: 61 LVVETARRVLDYTGGTLVMPMTVLVEEYWREIAGGLAAHGVPVRHFVLHADQETLRGRI 119
</PRE>
<PRE>
><a name = 423876></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00423876&dopt=GenPept" >pir||S06031</a> hypothetical protein - Enterobacteriaceae plasmid pWP113a
(fragment)
Length = 86
Score = 83.2 bits (204), Expect = 4e-15
Identities = 38/87 (43%), Positives = 54/87 (61%), Gaps = 1/87 (1%)
Query: 1 MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRA 60
MIIWING FG+GKT A L R + S ++DPE++GF ++ VP A D+Q PLWR
Sbjct: 1 MIIWINGPFGAGKTTLAERLRDRRSKSLIFDPEEIGFVVKETVPMP-ASGDYQDLPLWRG 59
Query: 61 FNYSLLASLTDTYRGILIVPMTIVHPE 87
+ + + Y +I+PMT+VHP+
Sbjct: 60 LTIAAVREIRRNYSQDIIIPMTLVHPD 86
</PRE>
<PRE>
><a name = 96587></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00096587&dopt=GenPept" >pir||S06034</a> hypothetical protein - Klebsiella pneumoniae plasmid pWP116a
(fragment)
<a name = 45939></a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00045939&dopt=GenPept" >emb|CAA31892.1|</a> (X13541) hypothetical protein [Plasmid pWP116a]
Length = 92
Score = 82.0 bits (201), Expect = 9e-15
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 1 MIIWINGAFGSGKTQTAFELHRRLNPSYVYDPEKMGFALRSMVPQEIAKDDFQSYPLWRA 60
MIIWING FG+GKT A L R S ++DPE++GF ++ VP A D+Q PLWR
Sbjct: 1 MIIWINGPFGAGKTTLAERLRDRRPKSLIFDPEEIGFVVKETVPIP-ASGDYQDLPLWRG 59
Query: 61 FNYSLLASLTDTYRGILIVPMTIVHPEY 88
+ ++ + Y +I+PMT+V+P+Y
Sbjct: 60 LTIAAVSEIRRNYSQDIIIPMTLVYPDY 87
</PRE>
<PRE>
Database: nr
Posted date: May 30, 2001 5:08 AM
Number of letters in database: 218,617,282
Number of sequences in database: 693,878
Lambda K H
0.323 0.138 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83284981
Number of Sequences: 693878
Number of extensions: 3200855
Number of successful extensions: 6684
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6663
Number of HSP's gapped (non-prelim): 12
length of query: 197
length of database: 218,617,282
effective HSP length: 0
effective length of query: 197
effective length of database: 218,617,282
effective search space: 43067604554
effective search space used: 43067604554
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 72 (32.3 bits)
</form>
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