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<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p><TITLE> RID=1038164033-015457-19065, gi|25056539|ref|XM_195248.1| Mus musculus similar to putative polyubiquitin (UBQ10) [Arabidopsis thaliana] (LOC270670), mRNA </TITLE>
<b>BLASTN 2.2.4 [Aug-26-2002]</b>

<pre>
<b><a href="http://www.ncbi.nlm.nih.gov/htbin-
post/Entrez/query?uid=9254694&form=6&db=m&Dopt=r">Reference</a>:</b>
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Sch&auml;ffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
<p>
RID: 1038164033-015457-19065
<p>
<b>Query=</b> gi|25056539|ref|XM_195248.1| Mus musculus similar to
putative polyubiquitin (UBQ10) [Arabidopsis thaliana] (LOC270670),
mRNA
         (285 letters)

<p>
<b>Database:</b> All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences) 
           1,473,826 sequences; 7,284,980,748 total letters

<p> <p>If you have any problems or questions with the results of this search <br>please refer to the <b><a href=http://www.ncbi.nlm.nih.gov/blast/blast_FAQs.html>BLAST FAQs</a></b><br><p>
<a href="Blast.cgi?CMD=Get&RID=1038164033-015457-19065&FORMAT_OBJECT=TaxBlast" TARGET="Taxonomy BLAST Results for 1038164033-015457-19065">Taxonomy reports</a>
<BR>
<PRE>


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=25056539&dopt=GenBank" >ref|XM_195248.1|</a>  Mus musculus similar to putative polyubiqu...   <a href = #25056539>565</a>   e-158
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=20302084&dopt=GenBank" >ref|NM_138895.1|</a>  Rattus norvegicus polyubiquitin (Loc192255...   <a href = #20302084>333</a>   8e-89
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00471155&dopt=GenBank" >dbj|D16554.1|RATPOLYU</a>  Rat mRNA for polyubiquitin (four repe...   <a href = #471155>333</a>   8e-89
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=18044722&dopt=GenBank" >gb|BC019850.1|</a>  Mus musculus, ubiquitin B, clone MGC:29922 I...   <a href = #18044722>325</a>   2e-86
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=06755918&dopt=GenBank" >ref|NM_011664.1|</a>  Mus musculus ubiquitin B (Ubb), mRNA            <a href = #6755918>315</a>   2e-83
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=18476730&dopt=GenBank" >emb|AL596181.10|</a>  Mouse DNA sequence from clone RP23-234K24 ...   <a href = #18476730>315</a>   2e-83
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00055117&dopt=GenBank" >emb|X51703.1|MMUBIQU</a>  Mouse mRNA for ubiquitin                    <a href = #55117>315</a>   2e-83
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12849188&dopt=GenBank" >dbj|AK012443.1|</a>  Mus musculus 11 days embryo whole body cDNA...   <a href = #12849188>315</a>   2e-83
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12850136&dopt=GenBank" >dbj|AK013027.1|</a>  Mus musculus 10, 11 days embryo whole body ...   <a href = #12850136>315</a>   2e-83
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12846201&dopt=GenBank" >dbj|AK010625.1|</a>  Mus musculus ES cells cDNA, RIKEN full-leng...   <a href = #12846201>315</a>   2e-83
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12833701&dopt=GenBank" >dbj|AK003190.1|</a>  Mus musculus 18 days embryo whole body cDNA...   <a href = #12833701>315</a>   2e-83
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12845837&dopt=GenBank" >dbj|AK010413.1|</a>  Mus musculus ES cells cDNA, RIKEN full-leng...   <a href = #12845837>315</a>   2e-83
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12840716&dopt=GenBank" >dbj|AK007273.1|</a>  Mus musculus adult male testis cDNA, RIKEN ...   <a href = #12840716>315</a>   2e-83
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=20873674&dopt=GenBank" >ref|XM_122700.1|</a>  Mus musculus similar to polyubiquitin 10 -...   <a href = #20873674>303</a>   7e-80
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=23593636&dopt=GenBank" >ref|XM_135280.2|</a>  Mus musculus similar to polyubiquitin [Rat...   <a href = #23593636>303</a>   7e-80
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00049476&dopt=GenBank" >emb|X60390.1|CGPOLYUGE</a>  C.griseus gene for polyubiquitin          <a href = #49476>303</a>   7e-80
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=20864222&dopt=GenBank" >ref|XM_143052.1|</a>  Mus musculus similar to fusion protein: ub...   <a href = #20864222>301</a>   3e-79
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00049585&dopt=GenBank" >emb|X08013.1|CSUBIQ</a>  Chinese hamster mRNA for ubiquitin           <a href = #49585>301</a>   3e-79
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12851403&dopt=GenBank" >dbj|AK013873.1|</a>  Mus musculus 12 days embryo head cDNA, RIKE...   <a href = #12851403>301</a>   3e-79
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00202260&dopt=GenBank" >gb|M81745.1|MUSUBIQB</a>  Mouse 1400 base pair ubiquitin mRNA, 3...   <a href = #202260>291</a>   3e-76
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=21070214&dopt=GenBank" >gb|AF506969.1|</a>  Equus caballus ubiquitin mRNA, complete cds       <a href = #21070214>287</a>   4e-75
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=02707836&dopt=GenBank" >gb|AF038129.1|AF038129</a>  Ovis aries polyubiquitin mRNA, compl...   <a href = #2707836>285</a>   2e-74
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00000644&dopt=GenBank" >emb|Z18245.1|BTPOLYUB</a>  Bos taurus gene for polyubiquitin          <a href = #644>285</a>   2e-74
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=15451312&dopt=GenBank" >dbj|AB071067.1|</a>  Macaca fascicularis testis cDNA clone:QtsA-...   <a href = #15451312>283</a>   6e-74
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00987828&dopt=GenBank" >emb|Z54175.1|BVDTGACB1</a>  Bovine viral diarrhea virus TGAC-B1 RNA   <a href = #987828>280</a>   1e-72
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00987825&dopt=GenBank" >emb|Z54176.1|BVDCPA2</a>  Bovine viral diarrhea virus cpA2 RNA        <a href = #987825>280</a>   1e-72
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00163574&dopt=GenBank" >gb|M62429.1|BOVPOUBA</a>  Bovine polyubiquitin mRNA, 3' end, clo...   <a href = #163574>280</a>   1e-72
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=24660326&dopt=GenBank" >gb|BC038999.1|</a>  Homo sapiens, ubiquitin B, clone IMAGE:49432...   <a href = #24660326>278</a>   4e-72
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=22538474&dopt=GenBank" >ref|NM_018955.2|</a>  Homo sapiens ubiquitin B (UBB), mRNA            <a href = #22538474>278</a>   4e-72
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=21410248&dopt=GenBank" >gb|BC031027.1|</a>  Homo sapiens, clone MGC:32826 IMAGE:4715377,...   <a href = #21410248>278</a>   4e-72
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=20070822&dopt=GenBank" >gb|BC026301.1|</a>  Homo sapiens, clone MGC:24729 IMAGE:4280629,...   <a href = #20070822>278</a>   4e-72
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=18308345&dopt=GenBank" >gb|AC093484.2|</a>  Homo sapiens chromosome , clone RP11-138I1, ...   <a href = #18308345>278</a>   4e-72
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=15929388&dopt=GenBank" >gb|BC015127.1|BC015127</a>  Homo sapiens, clone MGC:24232 IMAGE:...   <a href = #15929388>278</a>   4e-72
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=14424551&dopt=GenBank" >gb|BC009301.1|BC009301</a>  Homo sapiens, clone MGC:16688 IMAGE:...   <a href = #14424551>278</a>   4e-72
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12653220&dopt=GenBank" >gb|BC000379.1|BC000379</a>  Homo sapiens, ubiquitin B, clone MGC...   <a href = #12653220>278</a>   4e-72
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=06647297&dopt=GenBank" >emb|X04803.2|HSYUBG1</a>  Homo sapiens ubiquitin gene                 <a href = #6647297>278</a>   4e-72
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=14488116&dopt=GenBank" >emb|AL356460.3|HS84M10</a>  Homo sapiens chromosome 17 from PAC ...   <a href = #14488116>278</a>   4e-72
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=20163047&dopt=GenBank" >gb|AC068902.20|</a>  Mus musculus clone rp23-151l10, complete se...   <a href = #20163047>276</a>   2e-71
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=15680082&dopt=GenBank" >gb|BC014367.1|BC014367</a>  Homo sapiens, Similar to orosomucoid...   <a href = #15680082>276</a>   2e-71
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=20068526&dopt=GenBank" >emb|AL603923.7|</a>  Mouse DNA sequence from clone RP23-180L15 o...   <a href = #20068526>276</a>   2e-71
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00323207&dopt=GenBank" >gb|M62431.1|BVDCP1</a>  Bovine viral diarrhea virus CP1 putative...   <a href = #323207>270</a>   9e-70
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=24942955&dopt=GenBank" >gb|AC087575.11|</a>  Homo sapiens chromosome 17, clone RP11-305L...   <a href = #24942955>268</a>   4e-69
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=22064817&dopt=GenBank" >ref|XM_170833.1|</a>  Homo sapiens similar to polyubiquitin (UBQ...   <a href = #22064817>268</a>   4e-69
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00323229&dopt=GenBank" >gb|M96687.1|BVDPP</a>  Bovine viral diarrhea virus polyprotein g...   <a href = #323229>262</a>   2e-67
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=24047132&dopt=GenBank" >ref|NG_002287.1|</a>  Homo sapiens ubiquitin B pseudogene 2 (UBB...   <a href = #24047132>258</a>   4e-66
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00037582&dopt=GenBank" >emb|X04802.1|HSUBPSE2</a>  Homo sapiens UBBP2 pseudogene for ubi...   <a href = #37582>258</a>   4e-66
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00323216&dopt=GenBank" >gb|M87812.1|BVDMSEQH</a>  Bovine viral diarrhea virus mRNA sequence   <a href = #323216>254</a>   6e-65
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=09837283&dopt=GenBank" >gb|AF285161.1|AF285161</a>  Mus musculus cell-line C3H/He polyub...   <a href = #9837283>246</a>   1e-62
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=24047130&dopt=GenBank" >ref|NG_002285.1|</a>  Homo sapiens ubiquitin B pseudogene 4 (UBB...   <a href = #24047130>242</a>   2e-61
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00037572&dopt=GenBank" >emb|X07499.1|HSUBBP</a>  Homo sapiens UBBP4 pseudogene for ubiqu...   <a href = #37572>242</a>   2e-61
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=16973876&dopt=GenBank" >emb|AL445428.5|</a>  Human DNA sequence from clone RP11-144C20 o...   <a href = #16973876>242</a>   2e-61
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=23958187&dopt=GenBank" >gb|BC036303.1|</a>  Mus musculus, Similar to ubiquitin C, clone ...   <a href = #23958187>238</a>   3e-60
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=18256863&dopt=GenBank" >gb|BC021837.1|</a>  Mus musculus, Similar to ubiquitin C, clone ...   <a href = #18256863>238</a>   3e-60
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=19483856&dopt=GenBank" >gb|BC025894.1|</a>  Mus musculus, Similar to RIKEN cDNA 2700054O...   <a href = #19483856>238</a>   3e-60
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=14250447&dopt=GenBank" >gb|BC008661.1|</a>  Mus musculus, clone MGC:11492 IMAGE:3598724,...   <a href = #14250447>238</a>   3e-60
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=13879397&dopt=GenBank" >gb|BC006680.1|</a>  Mus musculus, Similar to ubiquitin C, clone ...   <a href = #13879397>238</a>   3e-60
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=21070949&dopt=GenBank" >ref|NM_019639.2|</a>  Mus musculus ubiquitin C (Ubc), mRNA            <a href = #21070949>238</a>   3e-60
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=20842691&dopt=GenBank" >ref|XM_147315.1|</a>  Mus musculus ubiquitin C (Ubc), mRNA            <a href = #20842691>238</a>   3e-60
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=09837285&dopt=GenBank" >gb|AF285162.1|AF285162</a>  Mus musculus cell-line C3H/RV polyub...   <a href = #9837285>238</a>   3e-60
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12849162&dopt=GenBank" >dbj|AK012427.1|</a>  Mus musculus 11 days embryo whole body cDNA...   <a href = #12849162>238</a>   3e-60
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12846765&dopt=GenBank" >dbj|AK010964.1|</a>  Mus musculus 13 days embryo liver cDNA, RIK...   <a href = #12846765>238</a>   3e-60
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00208890&dopt=GenBank" >gb|M11691.1|SYNMUSUBGA</a>  Synthetic beta-galactosidase/mouse u...   <a href = #208890>238</a>   3e-60
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00940394&dopt=GenBank" >dbj|D63782.1|CRUPUQ</a>  Chinese hamster gene for polyubiquitin,...   <a href = #940394>234</a>   5e-59
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=05523986&dopt=GenBank" >gb|AF104029.1|AF104029</a>  Bovine viral diarrhea virus-2 subgen...   <a href = #5523986>232</a>   2e-58
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=05523980&dopt=GenBank" >gb|AF104026.1|AF104026</a>  Bovine viral diarrhea virus-2 subgen...   <a href = #5523980>232</a>   2e-58
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=05523978&dopt=GenBank" >gb|AF104025.1|AF104025</a>  Bovine viral diarrhea virus-2 subgen...   <a href = #5523978>232</a>   2e-58
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=05523976&dopt=GenBank" >gb|AF104024.1|AF104024</a>  Bovine viral diarrhea virus-2 subgen...   <a href = #5523976>232</a>   2e-58
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=05523974&dopt=GenBank" >gb|AF104023.1|AF104023</a>  Bovine viral diarrhea virus-2 subgen...   <a href = #5523974>232</a>   2e-58
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=05523972&dopt=GenBank" >gb|AF104022.1|AF104022</a>  Bovine viral diarrhea virus-2 subgen...   <a href = #5523972>232</a>   2e-58
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=05523970&dopt=GenBank" >gb|AF104021.1|AF104021</a>  Bovine viral diarrhea virus-2 subgen...   <a href = #5523970>232</a>   2e-58
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=05523968&dopt=GenBank" >gb|AF104020.1|AF104020</a>  Bovine viral diarrhea virus-2 subgen...   <a href = #5523968>232</a>   2e-58
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=05523966&dopt=GenBank" >gb|AF104019.1|AF104019</a>  Bovine viral diarrhea virus-2 subgen...   <a href = #5523966>232</a>   2e-58
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00289506&dopt=GenBank" >gb|L13783.1|BVDP125A</a>  Bovine viral diarrhea virus p125 prote...   <a href = #289506>232</a>   2e-58
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=01197092&dopt=GenBank" >dbj|D83208.1|GPIUBIY</a>  Cavia cobaya mRNA for ubiquitin, compl...   <a href = #1197092>232</a>   2e-58
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=02627132&dopt=GenBank" >dbj|AB003732.1|</a>  Cricetulus griseus gene for polyubiquitin, ...   <a href = #2627132>226</a>   1e-56
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=02627130&dopt=GenBank" >dbj|AB003731.1|</a>  Cricetulus griseus gene for polyubiquitin, ...   <a href = #2627130>226</a>   1e-56
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=22798393&dopt=GenBank" >emb|AL808018.7|</a>  Mouse DNA sequence from clone RP23-473C10 o...   <a href = #22798393>226</a>   1e-56
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=23895840&dopt=GenBank" >emb|AL845466.3|</a>  Mouse DNA sequence from clone RP23-433P19 o...   <a href = #23895840>224</a>   5e-56
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00163572&dopt=GenBank" >gb|M62428.1|BOVPOUB</a>  Bovine polyubiquitin mRNA, 3' end, clon...   <a href = #163572>224</a>   5e-56
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=08394501&dopt=GenBank" >ref|NM_017314.1|</a>  Rattus norvegicus ubiquitin C (Ubc), mRNA       <a href = #8394501>222</a>   2e-55
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00471153&dopt=GenBank" >dbj|D17296.1|RATPILP</a>  Rat mRNA for polyubiquitin (ten comple...   <a href = #471153>222</a>   2e-55
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=05523982&dopt=GenBank" >gb|AF104027.1|AF104027</a>  Bovine viral diarrhea virus-2 subgen...   <a href = #5523982>220</a>   8e-55
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=10121775&dopt=GenBank" >gb|AF268174.1|AF268174</a>  Bovine viral diarrhea virus type 2 s...   <a href = #10121775>218</a>   3e-54
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=05523984&dopt=GenBank" >gb|AF104028.1|AF104028</a>  Bovine viral diarrhea virus-2 subgen...   <a href = #5523984>216</a>   1e-53
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00323217&dopt=GenBank" >gb|M87813.1|BVDMSEQI</a>  Bovine viral diarrhea virus mRNA sequence   <a href = #323217>214</a>   5e-53
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=01167509&dopt=GenBank" >dbj|D50527.1|MUSTI225D</a>  Mouse mRNA for TI-225, complete cds       <a href = #1167509>214</a>   5e-53
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00463374&dopt=GenBank" >gb|U03707.1|QSU03707</a>  Quinqueloculina seminulum ubiquitin ge...   <a href = #463374>212</a>   2e-52
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=24657521&dopt=GenBank" >gb|BC039193.1|</a>  Homo sapiens, Similar to ubiquitin C, clone ...   <a href = #24657521>202</a>   2e-49
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=22058885&dopt=GenBank" >ref|XM_055013.5|</a>  Homo sapiens ubiquitin C (UBC), mRNA            <a href = #22058885>202</a>   2e-49
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=22003948&dopt=GenBank" >gb|AC126309.8|</a>  Homo sapiens 12 BAC RP11-592O2 (Roswell Park...   <a href = #22003948>202</a>   2e-49
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=14286307&dopt=GenBank" >gb|BC008955.1|BC008955</a>  Homo sapiens, Similar to ubiquitin C...   <a href = #14286307>202</a>   2e-49
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12653358&dopt=GenBank" >gb|BC000449.1|BC000449</a>  Homo sapiens, Similar to ubiquitin C...   <a href = #12653358>202</a>   2e-49
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=02627128&dopt=GenBank" >dbj|AB003730.1|</a>  Homo sapiens gene for polyubiquitin, comple...   <a href = #2627128>202</a>   2e-49
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=10439801&dopt=GenBank" >dbj|AK026846.1|</a>  Homo sapiens cDNA: FLJ23193 fis, clone REC0...   <a href = #10439801>202</a>   2e-49
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=01304127&dopt=GenBank" >dbj|D63791.1|HUMPOLYUBI</a>  Human UbC gene for polyubiquitin, e...   <a href = #1304127>202</a>   2e-49
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=02647407&dopt=GenBank" >dbj|AB009010.1|</a>  Homo sapiens mRNA for polyubiquitin UbC, co...   <a href = #2647407>202</a>   2e-49
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=21758959&dopt=GenBank" >dbj|AK098827.1|</a>  Homo sapiens cDNA FLJ25961 fis, clone TST09...   <a href = #21758959>202</a>   2e-49
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00063746&dopt=GenBank" >emb|X58195.1|GGPOUBII</a>  G.gallus DNA for polyubiquitin gene U...   <a href = #63746>200</a>   7e-49
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=01050929&dopt=GenBank" >emb|X92661.1|RNUBC5</a>  R.norvegicus mRNA for polyubiquitin 5' end   <a href = #1050929>200</a>   7e-49
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00212848&dopt=GenBank" >gb|M14693.1|CHKUB1A</a>  Chicken ubiquitin I (UbI) gene, partial...   <a href = #212848>200</a>   7e-49
</PRE>
<CENTER><b><FONT color="green">Alignments</FONT></b></CENTER>
</form>
<PRE>
><a name = 25056539></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=25056539&dopt=GenBank" >ref|XM_195248.1|</a> Mus musculus similar to putative polyubiquitin (UBQ10) [Arabidopsis
           thaliana] (LOC270670), mRNA
          Length = 285

 Score =  565 bits (285), Expect = e-158
 Identities = 285/285 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggcattttgaaggcaagagcagacatgttggaaaaggaatctggaggcacctgggtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgggcattttgaaggcaagagcagacatgttggaaaaggaatctggaggcacctgggtc 60

                                                                       
Query: 61  aaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagccc 120

                                                                       
Query: 121 agtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccccccgacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccccccgacc 180

                                                                       
Query: 181 agcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattaca 240

                                                        
Query: 241 acatccagaaagagtcgaccctgcacctggtcctctggctattaa 285
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acatccagaaagagtcgaccctgcacctggtcctctggctattaa 285
</PRE>


<PRE>
><a name = 20302084></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=20302084&dopt=GenBank" >ref|NM_138895.1|</a> Rattus norvegicus polyubiquitin (Loc192255), mRNA
          Length = 1115

 Score =  333 bits (168), Expect = 8e-89
 Identities = 208/220 (94%), Gaps = 1/220 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 57  ggtcaaaatgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 116

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
           ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 117 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 176

                                                                       
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            ||||||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 177 tgaccagcagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctga 236

                                                   
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcctc 275
            |||||||||||||||||||| ||||||||||||||||||
Sbjct: 237 ctacaacatccagaaagagtcaaccctgcacctggtcctc 276
</PRE>


<PRE>

 Score =  311 bits (157), Expect = 3e-82
 Identities = 200/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 748 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 807

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 808 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 867

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 868 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 927

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||| ||||||||||||||||||
Sbjct: 928 atccagaaagagtcaaccctgcacctggtcctc 960
</PRE>


<PRE>

 Score =  311 bits (157), Expect = 3e-82
 Identities = 200/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 520 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 579

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 580 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 639

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 640 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 699

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||| ||||| ||||||||||||||||||
Sbjct: 700 atccagaaggagtcaaccctgcacctggtcctc 732
</PRE>


<PRE>

 Score =  303 bits (153), Expect = 7e-80
 Identities = 199/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 292 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 351

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 352 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 411

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 412 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 471

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||| ||||||||||| ||||||
Sbjct: 472 atccagaaagagtcaaccctgcaccttgtcctc 504
</PRE>


<PRE>
><a name = 471155></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00471155&dopt=GenBank" >dbj|D16554.1|RATPOLYU</a> Rat mRNA for polyubiquitin (four repetitive ubiquitins in tandem),
           complete cds
          Length = 1115

 Score =  333 bits (168), Expect = 8e-89
 Identities = 208/220 (94%), Gaps = 1/220 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 57  ggtcaaaatgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 116

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
           ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 117 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 176

                                                                       
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            ||||||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 177 tgaccagcagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctga 236

                                                   
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcctc 275
            |||||||||||||||||||| ||||||||||||||||||
Sbjct: 237 ctacaacatccagaaagagtcaaccctgcacctggtcctc 276
</PRE>


<PRE>

 Score =  311 bits (157), Expect = 3e-82
 Identities = 200/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 748 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 807

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 808 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 867

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 868 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 927

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||| ||||||||||||||||||
Sbjct: 928 atccagaaagagtcaaccctgcacctggtcctc 960
</PRE>


<PRE>

 Score =  311 bits (157), Expect = 3e-82
 Identities = 200/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 520 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 579

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 580 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 639

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 640 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 699

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||| ||||| ||||||||||||||||||
Sbjct: 700 atccagaaggagtcaaccctgcacctggtcctc 732
</PRE>


<PRE>

 Score =  303 bits (153), Expect = 7e-80
 Identities = 199/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 292 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 351

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 352 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 411

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 412 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 471

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||| ||||||||||| ||||||
Sbjct: 472 atccagaaagagtcaaccctgcaccttgtcctc 504
</PRE>


<PRE>
><a name = 18044722></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=18044722&dopt=GenBank" >gb|BC019850.1|</a> Mus musculus, ubiquitin B, clone MGC:29922 IMAGE:5123849, mRNA,
           complete cds
          Length = 1146

 Score =  325 bits (164), Expect = 2e-86
 Identities = 207/220 (94%), Gaps = 1/220 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 61  ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 120

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
           ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 180

                                                                       
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            |||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 181 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 240

                                                   
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcctc 275
           ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 241 ttacaacatccagaaagagtcaaccctgcacctggtcctc 280
</PRE>


<PRE>

 Score =  311 bits (157), Expect = 3e-82
 Identities = 200/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 752 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 811

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 812 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 871

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||  ||||||||||||||
Sbjct: 872 cagaggctgatctttgccggcaagcagctggaagatggccgcactctctctgattacaac 931

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||||||||||||||||||||||
Sbjct: 932 atccagaaagagtcgaccctgcacctggtcctc 964
</PRE>


<PRE>

 Score =  301 bits (152), Expect = 3e-79
 Identities = 198/212 (93%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 524 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 583

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 584 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 643

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 644 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 703

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| ||||| |||||||||||||||||
Sbjct: 704 atccagaaggagtcaaccctgcacctggtcct 735
</PRE>


<PRE>

 Score =  295 bits (149), Expect = 2e-77
 Identities = 198/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 296 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 355

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 356 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 415

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           || ||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 416 cataggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 475

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||| ||||| ||||||||||||||||||
Sbjct: 476 atccagaaggagtcaaccctgcacctggtcctc 508
</PRE>


<PRE>
><a name = 6755918></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=06755918&dopt=GenBank" >ref|NM_011664.1|</a> Mus musculus ubiquitin B (Ubb), mRNA
          Length = 1172

 Score =  315 bits (159), Expect = 2e-83
 Identities = 205/219 (93%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 98  ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 157

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
           ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 217

                                                                       
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            |||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 218 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 277

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 278 ttacaacatccagaaggagtcaaccctgcacctggtcct 316
</PRE>


<PRE>

 Score =  303 bits (153), Expect = 7e-80
 Identities = 199/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 333 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 392

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 393 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 452

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 453 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 512

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||| ||||||||||||||||||
Sbjct: 513 atccagaaagagtcaaccctgcacctggtcctc 545
</PRE>


<PRE>

 Score =  295 bits (149), Expect = 2e-77
 Identities = 198/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 789  atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 848

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
            || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 849  gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 908

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            |||||||| |||||||| |||||||| || ||||||||| ||||  ||||||||||||||
Sbjct: 909  cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 968

                                             
Query: 243  atccagaaagagtcgaccctgcacctggtcctc 275
            |||||||||||||||||||||||||||||||||
Sbjct: 969  atccagaaagagtcgaccctgcacctggtcctc 1001
</PRE>


<PRE>

 Score =  293 bits (148), Expect = 7e-77
 Identities = 197/212 (92%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 561 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 620

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 680

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| ||||| || |||||||||||| ||||| ||||||||||||||
Sbjct: 681 cagaggctgatctttgccggcaaacagctggaagatggccgcaccctctctgattacaac 740

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| ||||| |||||||||||||||||
Sbjct: 741 atccagaaggagtcaaccctgcacctggtcct 772
</PRE>


<PRE>
><a name = 18476730></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=18476730&dopt=GenBank" >emb|AL596181.10|</a> Mouse DNA sequence from clone RP23-234K24 on chromosome 11, complete
              sequence
          Length = 195339

 Score =  315 bits (159), Expect = 2e-83
 Identities = 205/219 (93%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                          
Query: 57     ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
              |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 122012 ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 121953

                                                                          
Query: 117    gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
              ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121952 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 121893

                                                                          
Query: 177    -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
               |||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 121892 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 121833

                                                     
Query: 236    ttacaacatccagaaagagtcgaccctgcacctggtcct 274
              ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 121832 ttacaacatccagaaggagtcaaccctgcacctggtcct 121794
</PRE>


<PRE>

 Score =  303 bits (153), Expect = 7e-80
 Identities = 199/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Minus

                                                                          
Query: 64     atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
              ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 121777 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 121718

                                                                          
Query: 124    gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
              || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 121717 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 121658

                                                                          
Query: 183    cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
              |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 121657 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 121598

                                               
Query: 243    atccagaaagagtcgaccctgcacctggtcctc 275
              |||||||||||||| ||||||||||||||||||
Sbjct: 121597 atccagaaagagtcaaccctgcacctggtcctc 121565
</PRE>


<PRE>

 Score =  301 bits (152), Expect = 3e-79
 Identities = 198/212 (93%), Gaps = 1/212 (0%)
 Strand = Plus / Minus

                                                                          
Query: 64     atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
              ||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 121549 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 121490

                                                                          
Query: 124    gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
              || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 121489 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 121430

                                                                          
Query: 183    cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
              |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 121429 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 121370

                                              
Query: 243    atccagaaagagtcgaccctgcacctggtcct 274
              |||||||| ||||| |||||||||||||||||
Sbjct: 121369 atccagaaggagtcaaccctgcacctggtcct 121338
</PRE>


<PRE>

 Score =  295 bits (149), Expect = 2e-77
 Identities = 198/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Minus

                                                                          
Query: 64     atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
              ||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 121321 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 121262

                                                                          
Query: 124    gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
              || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 121261 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 121202

                                                                          
Query: 183    cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
              |||||||| |||||||| |||||||| || ||||||||| ||||  ||||||||||||||
Sbjct: 121201 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 121142

                                               
Query: 243    atccagaaagagtcgaccctgcacctggtcctc 275
              |||||||||||||||||||||||||||||||||
Sbjct: 121141 atccagaaagagtcgaccctgcacctggtcctc 121109
</PRE>


<PRE>
><a name = 55117></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00055117&dopt=GenBank" >emb|X51703.1|MMUBIQU</a> Mouse mRNA for ubiquitin
          Length = 1172

 Score =  315 bits (159), Expect = 2e-83
 Identities = 205/219 (93%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 98  ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 157

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
           ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 217

                                                                       
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            |||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 218 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 277

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 278 ttacaacatccagaaggagtcaaccctgcacctggtcct 316
</PRE>


<PRE>

 Score =  303 bits (153), Expect = 7e-80
 Identities = 199/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 333 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 392

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 393 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 452

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 453 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 512

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||| ||||||||||||||||||
Sbjct: 513 atccagaaagagtcaaccctgcacctggtcctc 545
</PRE>


<PRE>

 Score =  295 bits (149), Expect = 2e-77
 Identities = 198/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 789  atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 848

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
            || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 849  gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 908

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            |||||||| |||||||| |||||||| || ||||||||| ||||  ||||||||||||||
Sbjct: 909  cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 968

                                             
Query: 243  atccagaaagagtcgaccctgcacctggtcctc 275
            |||||||||||||||||||||||||||||||||
Sbjct: 969  atccagaaagagtcgaccctgcacctggtcctc 1001
</PRE>


<PRE>

 Score =  293 bits (148), Expect = 7e-77
 Identities = 197/212 (92%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 561 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 620

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 680

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| ||||| || |||||||||||| ||||| ||||||||||||||
Sbjct: 681 cagaggctgatctttgccggcaaacagctggaagatggccgcaccctctctgattacaac 740

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| ||||| |||||||||||||||||
Sbjct: 741 atccagaaggagtcaaccctgcacctggtcct 772
</PRE>


<PRE>
><a name = 12849188></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12849188&dopt=GenBank" >dbj|AK012443.1|</a> Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2700055N04:ubiquitin B, full
           insert sequence
          Length = 1166

 Score =  315 bits (159), Expect = 2e-83
 Identities = 205/219 (93%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 94  ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 153

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
           ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 154 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 213

                                                                       
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            |||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 214 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 273

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 274 ttacaacatccagaaggagtcaaccctgcacctggtcct 312
</PRE>


<PRE>

 Score =  301 bits (152), Expect = 3e-79
 Identities = 198/212 (93%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 557 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 616

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 617 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 676

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 677 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 736

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| ||||| |||||||||||||||||
Sbjct: 737 atccagaaggagtcaaccctgcacctggtcct 768
</PRE>


<PRE>

 Score =  297 bits (150), Expect = 4e-78
 Identities = 196/210 (93%), Gaps = 1/210 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 329 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 388

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 389 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 448

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 449 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 508

                                         
Query: 243 atccagaaagagtcgaccctgcacctggtc 272
           |||||||||||||| |||||||||||||||
Sbjct: 509 atccagaaagagtcaaccctgcacctggtc 538
</PRE>


<PRE>

 Score =  295 bits (149), Expect = 2e-77
 Identities = 198/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 785 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 844

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 845 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 904

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| || ||||||||| ||||  ||||||||||||||
Sbjct: 905 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 964

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||||||||||||||||||||||
Sbjct: 965 atccagaaagagtcgaccctgcacctggtcctc 997
</PRE>


<PRE>
><a name = 12850136></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12850136&dopt=GenBank" >dbj|AK013027.1|</a> Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2810407D23:ubiquitin B, full
           insert sequence
          Length = 1167

 Score =  315 bits (159), Expect = 2e-83
 Identities = 205/219 (93%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 93  ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 152

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
           ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 212

                                                                       
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            |||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 213 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 272

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 273 ttacaacatccagaaggagtcaaccctgcacctggtcct 311
</PRE>


<PRE>

 Score =  303 bits (153), Expect = 7e-80
 Identities = 199/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 328 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 387

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 388 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 447

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 448 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 507

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||| ||||||||||||||||||
Sbjct: 508 atccagaaagagtcaaccctgcacctggtcctc 540
</PRE>


<PRE>

 Score =  301 bits (152), Expect = 3e-79
 Identities = 198/212 (93%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 556 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 615

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 616 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 675

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 676 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 735

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| ||||| |||||||||||||||||
Sbjct: 736 atccagaaggagtcaaccctgcacctggtcct 767
</PRE>


<PRE>

 Score =  295 bits (149), Expect = 2e-77
 Identities = 198/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 784 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 843

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 844 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 903

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| || ||||||||| ||||  ||||||||||||||
Sbjct: 904 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 963

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||||||||||||||||||||||
Sbjct: 964 atccagaaagagtcgaccctgcacctggtcctc 996
</PRE>


<PRE>
><a name = 12846201></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12846201&dopt=GenBank" >dbj|AK010625.1|</a> Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:2410036G24:ubiquitin B, full insert sequence
          Length = 1160

 Score =  315 bits (159), Expect = 2e-83
 Identities = 205/219 (93%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 93  ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 152

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
           ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 212

                                                                       
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            |||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 213 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 272

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 273 ttacaacatccagaaggagtcaaccctgcacctggtcct 311
</PRE>


<PRE>

 Score =  303 bits (153), Expect = 7e-80
 Identities = 199/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 328 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 387

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 388 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 447

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 448 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 507

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||| ||||||||||||||||||
Sbjct: 508 atccagaaagagtcaaccctgcacctggtcctc 540
</PRE>


<PRE>

 Score =  301 bits (152), Expect = 3e-79
 Identities = 198/212 (93%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 556 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 615

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 616 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 675

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 676 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 735

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| ||||| |||||||||||||||||
Sbjct: 736 atccagaaggagtcaaccctgcacctggtcct 767
</PRE>


<PRE>

 Score =  295 bits (149), Expect = 2e-77
 Identities = 198/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 784 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 843

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 844 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 903

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| || ||||||||| ||||  ||||||||||||||
Sbjct: 904 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 963

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||||||||||||||||||||||
Sbjct: 964 atccagaaagagtcgaccctgcacctggtcctc 996
</PRE>


<PRE>
><a name = 12833701></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12833701&dopt=GenBank" >dbj|AK003190.1|</a> Mus musculus 18 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1100001L13:ubiquitin B, full
           insert sequence
          Length = 932

 Score =  315 bits (159), Expect = 2e-83
 Identities = 205/219 (93%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 93  ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 152

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
           ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 212

                                                                       
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            |||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 213 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 272

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 273 ttacaacatccagaaggagtcaaccctgcacctggtcct 311
</PRE>


<PRE>

 Score =  295 bits (149), Expect = 2e-77
 Identities = 198/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 556 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 615

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 616 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 675

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| || ||||||||| ||||  ||||||||||||||
Sbjct: 676 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 735

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||||||||||||||||||||||
Sbjct: 736 atccagaaagagtcgaccctgcacctggtcctc 768
</PRE>


<PRE>

 Score =  293 bits (148), Expect = 7e-77
 Identities = 197/212 (92%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 328 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 387

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 388 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 447

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 448 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 507

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| ||||| |||||||||||||||||
Sbjct: 508 atccagaaggagtcaaccctgcacctggtcct 539
</PRE>


<PRE>
><a name = 12845837></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12845837&dopt=GenBank" >dbj|AK010413.1|</a> Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:2410005G06:ubiquitin B, full insert sequence
          Length = 1165

 Score =  315 bits (159), Expect = 2e-83
 Identities = 205/219 (93%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 94  ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 153

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
           ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 154 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 213

                                                                       
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            |||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 214 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 273

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 274 ttacaacatccagaaggagtcaaccctgcacctggtcct 312
</PRE>


<PRE>

 Score =  303 bits (153), Expect = 7e-80
 Identities = 199/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 329 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 388

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 389 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 448

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 449 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 508

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||| ||||||||||||||||||
Sbjct: 509 atccagaaagagtcaaccctgcacctggtcctc 541
</PRE>


<PRE>

 Score =  301 bits (152), Expect = 3e-79
 Identities = 198/212 (93%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 557 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 616

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 617 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 676

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 677 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 736

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| ||||| |||||||||||||||||
Sbjct: 737 atccagaaggagtcaaccctgcacctggtcct 768
</PRE>


<PRE>

 Score =  295 bits (149), Expect = 2e-77
 Identities = 198/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 785 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 844

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 845 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 904

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| || ||||||||| ||||  ||||||||||||||
Sbjct: 905 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 964

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||||||||||||||||||||||
Sbjct: 965 atccagaaagagtcgaccctgcacctggtcctc 997
</PRE>


<PRE>
><a name = 12840716></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12840716&dopt=GenBank" >dbj|AK007273.1|</a> Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700124N12:ubiquitin B, full insert
           sequence
          Length = 1195

 Score =  315 bits (159), Expect = 2e-83
 Identities = 205/219 (93%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 124 ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 183

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
           ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 243

                                                                       
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            |||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 244 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 303

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 304 ttacaacatccagaaggagtcaaccctgcacctggtcct 342
</PRE>


<PRE>

 Score =  303 bits (153), Expect = 7e-80
 Identities = 199/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 359 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 418

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 419 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 478

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 479 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 538

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||| ||||||||||||||||||
Sbjct: 539 atccagaaagagtcaaccctgcacctggtcctc 571
</PRE>


<PRE>

 Score =  301 bits (152), Expect = 3e-79
 Identities = 198/212 (93%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 587 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 646

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 647 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 706

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 707 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 766

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| ||||| |||||||||||||||||
Sbjct: 767 atccagaaggagtcaaccctgcacctggtcct 798
</PRE>


<PRE>

 Score =  295 bits (149), Expect = 2e-77
 Identities = 198/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 815  atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 874

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
            || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 875  gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 934

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            |||||||| |||||||| |||||||| || ||||||||| ||||  ||||||||||||||
Sbjct: 935  cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 994

                                             
Query: 243  atccagaaagagtcgaccctgcacctggtcctc 275
            |||||||||||||||||||||||||||||||||
Sbjct: 995  atccagaaagagtcgaccctgcacctggtcctc 1027
</PRE>


<PRE>
><a name = 20873674></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=20873674&dopt=GenBank" >ref|XM_122700.1|</a> Mus musculus similar to polyubiquitin 10 - rat (LOC218963), mRNA
          Length = 840

 Score =  303 bits (153), Expect = 7e-80
 Identities = 199/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 1   atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 60

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61  gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 120

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 121 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 180

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||| ||||| ||||||||||||||||||
Sbjct: 181 atccagaaggagtcaaccctgcacctggtcctc 213
</PRE>


<PRE>

 Score =  303 bits (153), Expect = 7e-80
 Identities = 199/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 229 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 288

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 289 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 348

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 349 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 408

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||| ||||||||||||||||||
Sbjct: 409 atccagaaagagtcaaccctgcacctggtcctc 441
</PRE>


<PRE>

 Score =  299 bits (151), Expect = 1e-78
 Identities = 199/214 (92%), Gaps = 2/214 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 457 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 516

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc--gacca 181
           || ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 517 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatccccccctgacca 576

                                                                       
Query: 182 gcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaa 241
           ||||||||| |||||||| |||||||| || ||||||||| ||||  |||||||||||||
Sbjct: 577 gcagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaa 636

                                             
Query: 242 catccagaaagagtcgaccctgcacctggtcctc 275
           ||||||||||||||||||||||||||||||||||
Sbjct: 637 catccagaaagagtcgaccctgcacctggtcctc 670
</PRE>


<PRE>
><a name = 23593636></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=23593636&dopt=GenBank" >ref|XM_135280.2|</a> Mus musculus similar to polyubiquitin [Rattus norvegicus]
           (LOC212125), mRNA
          Length = 839

 Score =  303 bits (153), Expect = 7e-80
 Identities = 199/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 1   atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 60

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61  gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 120

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 121 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 180

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||| ||||| ||||||||||||||||||
Sbjct: 181 atccagaaggagtcaaccctgcacctggtcctc 213
</PRE>


<PRE>

 Score =  303 bits (153), Expect = 7e-80
 Identities = 199/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 229 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 288

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 289 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 348

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 349 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 408

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||| ||||||||||||||||||
Sbjct: 409 atccagaaagagtcaaccctgcacctggtcctc 441
</PRE>


<PRE>

 Score =  299 bits (151), Expect = 1e-78
 Identities = 194/207 (93%), Gaps = 1/207 (0%)
 Strand = Plus / Plus

                                                                       
Query: 70  atcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagtgaaacc 129
           ||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||
Sbjct: 463 atcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacacc 522

                                                                       
Query: 130 atcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccagcagagg 188
           |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 523 atcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg 582

                                                                       
Query: 189 ctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaacatccag 248
           || |||||||| |||||||| || ||||||||| ||||  ||||||||||||||||||||
Sbjct: 583 ctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaacatccag 642

                                      
Query: 249 aaagagtcgaccctgcacctggtcctc 275
           |||||||||||||||||||||||||||
Sbjct: 643 aaagagtcgaccctgcacctggtcctc 669
</PRE>


<PRE>
><a name = 49476></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00049476&dopt=GenBank" >emb|X60390.1|CGPOLYUGE</a> C.griseus gene for polyubiquitin
          Length = 1603

 Score =  303 bits (153), Expect = 7e-80
 Identities = 199/213 (93%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1089 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctagaggtggagcccagt 1148

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
            || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1149 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccccgaccag 1208

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            ||| | ||||||||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 1209 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 1268

                                             
Query: 243  atccagaaagagtcgaccctgcacctggtcctc 275
            |||||||||||||| ||||||||||||||||||
Sbjct: 1269 atccagaaagagtccaccctgcacctggtcctc 1301
</PRE>


<PRE>

 Score =  301 bits (152), Expect = 3e-79
 Identities = 204/220 (92%), Gaps = 1/220 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 170 ggtcaaaatgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 229

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
           ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 230 gcccagtgacaccatcgaaaatgtcaaggccaagatccaggataaagagggcatcccccc 289

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
           |||||||||| | ||||||||||| |||||||| |||||||||||| ||||  | |||||
Sbjct: 290 cgaccagcagcgactcatctttgccggcaagcagctggaagatggccgcactctttctga 349

                                                   
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcctc 275
           ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 350 ttacaacatccagaaagagtccaccctgcacctggtcctc 389
</PRE>


<PRE>

 Score =  280 bits (141), Expect = 1e-72
 Identities = 196/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 633 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 692

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
           || |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 693 gacaccatcgagaatgtcaaggccaagatccaggataaggagggcatcccccccgaccag 752

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||| | ||||||||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 753 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 812

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||| ||||||||||||||||||
Sbjct: 813 atccagaaagagtccaccctgcacctggtcctc 845
</PRE>


<PRE>

 Score =  264 bits (133), Expect = 6e-68
 Identities = 194/213 (91%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| || |||| |||||||||||| ||||||||||||||||||||| |||| ||||||
Sbjct: 861  atgcagattttcgtgaagaccctgaccggcaagaccatcaccctagaggtggaacccagt 920

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
            || |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 921  gacaccatcgagaatgtcaaggccaagatccaggataaggagggcatcccccccgaccag 980

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            ||| | ||||||||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 981  cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 1040

                                             
Query: 243  atccagaaagagtcgaccctgcacctggtcctc 275
            |||||||||||||| ||||||||||||||||||
Sbjct: 1041 atccagaaagagtccaccctgcacctggtcctc 1073
</PRE>


<PRE>

 Score =  264 bits (133), Expect = 6e-68
 Identities = 194/213 (91%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| || |||| |||||||||||| ||||||||||||||||||||| |||| ||||||
Sbjct: 405 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctagaggtggaacccagt 464

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
           || |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 465 gacaccatcgagaatgtcaaggccaagatccaggataaggagggcatcccccccgaccag 524

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||| | ||||||||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 525 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 584

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||| ||||||||||||||||||
Sbjct: 585 atccagaaagagtccaccctgcacctggtcctc 617
</PRE>


<PRE>
><a name = 20864222></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=20864222&dopt=GenBank" >ref|XM_143052.1|</a> Mus musculus similar to fusion protein: ubiquitin (bases 43_513);
           ribosomal protein S27a (bases 217_532) [Rattus
           norvegicus] (LOC241863), mRNA
          Length = 858

 Score =  301 bits (152), Expect = 3e-79
 Identities = 195/208 (93%), Gaps = 1/208 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 1   atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 60

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61  gacaccattgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 120

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 121 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 180

                                       
Query: 243 atccagaaagagtcgaccctgcacctgg 270
           ||||||||||||||||||||||||||||
Sbjct: 181 atccagaaagagtcgaccctgcacctgg 208
</PRE>


<PRE>
><a name = 49585></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00049585&dopt=GenBank" >emb|X08013.1|CSUBIQ</a> Chinese hamster mRNA for ubiquitin
          Length = 752

 Score =  301 bits (152), Expect = 3e-79
 Identities = 204/220 (92%), Gaps = 1/220 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 78  ggtcaaaatgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 137

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
           ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 138 gcccagtgacaccatcgaaaatgtcaaggccaagatccaggataaagagggcatcccccc 197

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
           |||||||||| | ||||||||||| |||||||| |||||||||||| ||||  | |||||
Sbjct: 198 cgaccagcagcgactcatctttgccggcaagcagctggaagatggccgcactctttctga 257

                                                   
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcctc 275
           ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 258 ttacaacatccagaaagagtccaccctgcacctggtcctc 297
</PRE>


<PRE>

 Score =  301 bits (152), Expect = 3e-79
 Identities = 198/212 (93%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 541 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctagaggtggagcccagt 600

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
           || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 601 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccccgaccag 660

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||| | ||||||||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 661 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 720

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||||||||| |||||||||||||||||
Sbjct: 721 atccagaaagagtccaccctgcacctggtcct 752
</PRE>


<PRE>

 Score =  264 bits (133), Expect = 6e-68
 Identities = 194/213 (91%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| || |||| |||||||||||| ||||||||||||||||||||| |||| ||||||
Sbjct: 313 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctagaggtggaacccagt 372

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
           || |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 373 gacaccatcgagaatgtcaaggccaagatccaggataaggagggcatcccccccgaccag 432

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||| | ||||||||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 433 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 492

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||| ||||||||||||||||||
Sbjct: 493 atccagaaagagtccaccctgcacctggtcctc 525
</PRE>


<PRE>
><a name = 12851403></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12851403&dopt=GenBank" >dbj|AK013873.1|</a> Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched
           library, clone:3000008M07:ubiquitin B, full insert
           sequence
          Length = 1162

 Score =  301 bits (152), Expect = 3e-79
 Identities = 198/212 (93%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 554 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 613

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 614 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 673

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 674 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 733

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| ||||| |||||||||||||||||
Sbjct: 734 atccagaaggagtcaaccctgcacctggtcct 765
</PRE>


<PRE>

 Score =  291 bits (147), Expect = 3e-76
 Identities = 202/219 (92%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 91  ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 150

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
           ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 151 gcccagtgacaccatcgagaacgtgaaggccaagatccgggataaagagggcatcccccc 210

                                                                       
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            |||||||||||||| |||||||| |||||||| |||||||||||  ||||| |||||||
Sbjct: 211 tgaccagcagaggctgatctttgccggcaagcagctggaagatggaagcaccctctctga 270

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
           |||||||| |||||| ||||| |||||||||||||||||
Sbjct: 271 ttacaacaaccagaaggagtcaaccctgcacctggtcct 309
</PRE>


<PRE>

 Score =  287 bits (145), Expect = 4e-75
 Identities = 197/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 782 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 841

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 842 gacaccatcgagaatgtgaaggccaagatccaggataaggagggcatcccccctgaccag 901

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| || ||||||||| ||||  ||||||||||||||
Sbjct: 902 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 961

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||||||||||||||||||||||
Sbjct: 962 atccagaaagagtcgaccctgcacctggtcctc 994
</PRE>


<PRE>

 Score =  287 bits (145), Expect = 4e-75
 Identities = 197/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| ||||||||| || ||||||||||||||||| | | |||||||||||
Sbjct: 326 atgcagatcttcgtgaagacccttaccggcaagaccatcaccctgggggtggagcccagt 385

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 386 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 445

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 446 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 505

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||| ||||||||||||||||||
Sbjct: 506 atccagaaagagtcaaccctgcacctggtcctc 538
</PRE>


<PRE>
><a name = 202260></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00202260&dopt=GenBank" >gb|M81745.1|MUSUBIQB</a> Mouse 1400 base pair ubiquitin mRNA, 3' end
          Length = 329

 Score =  291 bits (147), Expect = 3e-76
 Identities = 193/207 (93%), Gaps = 1/207 (0%)
 Strand = Plus / Plus

                                                                       
Query: 70  atcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagtgaaacc 129
           ||||||| |||||||||||| ||||||||||||||| | ||| ||||||||||||| |||
Sbjct: 1   atcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagtgacacc 60

                                                                       
Query: 130 atcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccagcagagg 188
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61  atcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg 120

                                                                       
Query: 189 ctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaacatccag 248
           || |||||||| |||||||| || ||||||||| ||||  ||||||||||||||||||||
Sbjct: 121 ctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaacatccag 180

                                      
Query: 249 aaagagtcgaccctgcacctggtcctc 275
           |||||||||||||||||||||||||||
Sbjct: 181 aaagagtcgaccctgcacctggtcctc 207
</PRE>


<PRE>
><a name = 21070214></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=21070214&dopt=GenBank" >gb|AF506969.1|</a> Equus caballus ubiquitin mRNA, complete cds
          Length = 1157

 Score =  287 bits (145), Expect = 4e-75
 Identities = 194/209 (92%), Gaps = 1/209 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| || |||| |||||||||||| ||||||||||||||||| ||| |||||||||| 
Sbjct: 803  atgcagattttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagc 862

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
            || ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 863  gacaccatcgagaatgtgaaggccaagatccaggataaggagggcatcccccccgaccag 922

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            |||||||||||||||||||||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 923  cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgattacaac 982

                                         
Query: 243  atccagaaagagtcgaccctgcacctggt 271
            |||||||||||||||||||||||||||||
Sbjct: 983  atccagaaagagtcgaccctgcacctggt 1011
</PRE>


<PRE>

 Score =  278 bits (140), Expect = 4e-72
 Identities = 198/216 (91%), Gaps = 1/216 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||| | |||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 112 ggtcaaaatgcagatctttgtgaagaccctgaccggcaagaccatcaccctggaggtgga 171

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
           |||||| || ||||||||||| || |||||||||||||||||||| ||||||||||||||
Sbjct: 172 gcccagcgacaccatcgagaacgtcaaggccaagatccaggataaggagggcatcccccc 231

                                                                       
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            |||||||||||||||||||||||||||||||| |||||||||||| ||||  | || ||
Sbjct: 232 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgcactctttccga 291

                                               
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggt 271
           ||||||||||||||||||||||||||||||||||||
Sbjct: 292 ttacaacatccagaaagagtcgaccctgcacctggt 327
</PRE>


<PRE>

 Score =  240 bits (121), Expect = 8e-61
 Identities = 188/209 (89%), Gaps = 1/209 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| || |||| |||||||||||| ||||||||||| ||||| ||| |||||||||| 
Sbjct: 575 atgcagattttcgtgaagaccctgaccggcaagaccattaccctggaggtggagcccagc 634

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
           || ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 635 gacaccatcgagaatgtgaaggccaagatccaggataaggagggcatcccccccgaccag 694

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||| ||||||||||||||||||| ||||| |||||  ||||| | ||||||||||||
Sbjct: 695 cagaggttcatctttgcaggcaagcagctggaggatgggcgcaccctgtctgattacaac 754

                                        
Query: 243 atccagaaagagtcgaccctgcacctggt 271
           |||||||| ||||| || |||||||||||
Sbjct: 755 atccagaaggagtccactctgcacctggt 783
</PRE>


<PRE>

 Score =  232 bits (117), Expect = 2e-58
 Identities = 187/209 (89%), Gaps = 1/209 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| || |||| |||||||||||| ||||||||||||||||| ||| |||||||||| 
Sbjct: 347 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagc 406

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
           || ||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 407 gacaccatcgagaacgtcaaggccaagatccaggataaggagggcatcccccccgaccag 466

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| ||||| |||||  ||||| | ||||| ||||||
Sbjct: 467 cagaggctcatctttgcaggcaagcagctggaggatgggcgcaccctgtctgactacaac 526

                                        
Query: 243 atccagaaagagtcgaccctgcacctggt 271
           |||||||| ||||| || |||||||||||
Sbjct: 527 atccagaaggagtccactctgcacctggt 555
</PRE>


<PRE>
><a name = 2707836></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=02707836&dopt=GenBank" >gb|AF038129.1|AF038129</a> Ovis aries polyubiquitin mRNA, complete cds
          Length = 1102

 Score =  285 bits (144), Expect = 2e-74
 Identities = 199/216 (92%), Gaps = 1/216 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||||||||||| ||| |||||||| ||||||||||||||||| ||| ||||
Sbjct: 89  ggtcaaaatgcaaatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtgga 148

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccc 175
           ||||||||| ||||||||||||||||||||||||||||||||||| || |||| ||||||
Sbjct: 149 gcccagtgacaccatcgagaatgtgaaggccaagatccaggataaggaaggcattccccc 208

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            ||||||||||||||||||||||| |||||||| |||||||||||| ||||  | |||||
Sbjct: 209 tgaccagcagaggctcatctttgccggcaagcagctggaagatggccgcactctttctga 268

                                               
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggt 271
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 269 ttacaacatccagaaggagtcgaccctgcacctggt 304
</PRE>


<PRE>

 Score =  264 bits (133), Expect = 6e-68
 Identities = 191/209 (91%), Gaps = 1/209 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 324 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 383

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccccgaccag 182
           || ||||||||||| ||||||||||||||||||||||| || |||| |||||| ||||||
Sbjct: 384 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 443

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 444 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 503

                                        
Query: 243 atccagaaagagtcgaccctgcacctggt 271
           |||||||| ||||||||||||||||||||
Sbjct: 504 atccagaaggagtcgaccctgcacctggt 532
</PRE>


<PRE>

 Score =  264 bits (133), Expect = 6e-68
 Identities = 191/209 (91%), Gaps = 1/209 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 552 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 611

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccccgaccag 182
           || ||||||||||| ||||||||||||||||||||||| || |||| |||||| ||||||
Sbjct: 612 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 671

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 672 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 731

                                        
Query: 243 atccagaaagagtcgaccctgcacctggt 271
           |||||||| ||||||||||||||||||||
Sbjct: 732 atccagaaggagtcgaccctgcacctggt 760
</PRE>


<PRE>

 Score =  262 bits (132), Expect = 2e-67
 Identities = 193/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||| | |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 780 atgcagatctttgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 839

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 840 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 899

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 900 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 959

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           || |||||||||||||||||||||||||||||
Sbjct: 960 attcagaaagagtcgaccctgcacctggtcct 991
</PRE>


<PRE>
><a name = 644></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00000644&dopt=GenBank" >emb|Z18245.1|BTPOLYUB</a> Bos taurus gene for polyubiquitin
          Length = 1144

 Score =  285 bits (144), Expect = 2e-74
 Identities = 202/220 (91%), Gaps = 1/220 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| ||| |||||||| ||||||||||||||||| ||| ||||
Sbjct: 80  ggtcaaaatgcagatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtgga 139

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
           ||||||||| ||||||||||| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 140 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccc 199

                                                                       
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            ||||||||||||||||||||||| |||||||| |||||||||||| ||||  | |||||
Sbjct: 200 tgaccagcagaggctcatctttgccggcaagcagctggaagatggccgcactctttctga 259

                                                   
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcctc 275
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttacaacatccagaaagagtcgaccctgcacctggtcctc 299
</PRE>


<PRE>

 Score =  280 bits (141), Expect = 1e-72
 Identities = 196/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 543 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 602

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 603 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 662

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 663 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 722

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||||||||||||||||||||||
Sbjct: 723 atccagaaagagtcgaccctgcacctggtcctc 755
</PRE>


<PRE>

 Score =  272 bits (137), Expect = 2e-70
 Identities = 195/213 (91%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| || |||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 315 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 374

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
           || ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 375 gacaccatcgagaacgtgaaggccaagatccaggataaggagggcattccccccgaccag 434

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||||||| |||||||| |||||||||||| ||||  | | ||||||||||
Sbjct: 435 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttttgattacaac 494

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||||||||||||||||||||||
Sbjct: 495 atccagaaagagtcgaccctgcacctggtcctc 527
</PRE>


<PRE>

 Score =  270 bits (136), Expect = 9e-70
 Identities = 194/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 771 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 830

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 831 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 890

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 891 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 950

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||||||||||||||||||||
Sbjct: 951 atccagaaagagtcgaccctgcacctggtcct 982
</PRE>


<PRE>
><a name = 15451312></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=15451312&dopt=GenBank" >dbj|AB071067.1|</a> Macaca fascicularis testis cDNA clone:QtsA-16192, full insert
           sequence
          Length = 883

 Score =  283 bits (143), Expect = 6e-74
 Identities = 201/219 (91%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| |||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 30  ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcacccttgaggtgga 89

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
           ||||||||| |||||||| |||||||||||||| ||||||||||| || ||||| |||||
Sbjct: 90  gcccagtgacaccatcgaaaatgtgaaggccaaaatccaggataaggaaggcattccccc 149

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
           ||||||||||||||||||||||||||||||||| |||||||||||| ||||  | |||||
Sbjct: 150 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctga 209

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||||||||||||||||||||| |||||
Sbjct: 210 ctacaacatccagaaagagtcgaccctgcaccttgtcct 248
</PRE>


<PRE>

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 265 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 324

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
           || |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 325 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 384

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 385 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 444

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| |||||||||||||||||||||||
Sbjct: 445 atccagaaggagtcgaccctgcacctggtcct 476
</PRE>


<PRE>

 Score =  262 bits (132), Expect = 2e-67
 Identities = 193/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| ||| |||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 493 atgcagatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtggagcccagt 552

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
           || |||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 553 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 612

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 613 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 672

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| ||||| |||||||||||||||||
Sbjct: 673 atccagaaggagtcaaccctgcacctggtcct 704
</PRE>


<PRE>
><a name = 987828></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00987828&dopt=GenBank" >emb|Z54175.1|BVDTGACB1</a> Bovine viral diarrhea virus TGAC-B1 RNA
          Length = 984

 Score =  280 bits (141), Expect = 1e-72
 Identities = 196/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 574 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 633

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 634 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 693

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 694 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 753

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||||||||||||||||||||||
Sbjct: 754 atccagaaagagtcgaccctgcacctggtcctc 786
</PRE>


<PRE>

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 244 tccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||||||||||||| |||||||
Sbjct: 527 tccagaaagagtcgaccctgcacccggtcctc 558
</PRE>


<PRE>
><a name = 987825></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00987825&dopt=GenBank" >emb|Z54176.1|BVDCPA2</a> Bovine viral diarrhea virus cpA2 RNA
          Length = 984

 Score =  280 bits (141), Expect = 1e-72
 Identities = 196/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 574 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 633

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 634 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 693

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 694 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 753

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||||||||||||||||||||||
Sbjct: 754 atccagaaagagtcgaccctgcacctggtcctc 786
</PRE>


<PRE>

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 244 tccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||||||||||||| |||||||
Sbjct: 527 tccagaaagagtcgaccctgcacccggtcctc 558
</PRE>


<PRE>
><a name = 163574></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00163574&dopt=GenBank" >gb|M62429.1|BOVPOUBA</a> Bovine polyubiquitin mRNA, 3' end, clone rpub2
          Length = 636

 Score =  280 bits (141), Expect = 1e-72
 Identities = 196/213 (92%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 35  atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 94

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 95  gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 154

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 155 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 214

                                            
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
           |||||||||||||||||||||||||||||||||
Sbjct: 215 atccagaaagagtcgaccctgcacctggtcctc 247
</PRE>


<PRE>

 Score =  270 bits (136), Expect = 9e-70
 Identities = 194/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 263 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 322

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 323 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 382

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 383 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 442

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||||||||||||||||||||
Sbjct: 443 atccagaaagagtcgaccctgcacctggtcct 474
</PRE>


<PRE>
><a name = 24660326></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=24660326&dopt=GenBank" >gb|BC038999.1|</a> Homo sapiens, ubiquitin B, clone IMAGE:4943285, mRNA
          Length = 957

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 336 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 395

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
           || |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 396 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 455

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 456 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 515

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| |||||||||||||||||||||||
Sbjct: 516 atccagaaggagtcgaccctgcacctggtcct 547
</PRE>


<PRE>

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 564 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 623

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 624 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 683

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 684 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 743

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||||||||||||||||||||
Sbjct: 744 atccagaaagagtcgaccctgcacctggtcct 775
</PRE>


<PRE>

 Score =  268 bits (135), Expect = 4e-69
 Identities = 199/219 (90%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 101 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 160

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
           ||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 161 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 220

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
           ||||||||||||||||||||||||||||||||| |||||||||||| | ||  | |||||
Sbjct: 221 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 280

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||| |||||||||||||||||||||||
Sbjct: 281 ctacaacatccagaaggagtcgaccctgcacctggtcct 319
</PRE>


<PRE>
><a name = 22538474></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=22538474&dopt=GenBank" >ref|NM_018955.2|</a> Homo sapiens ubiquitin B (UBB), mRNA
          Length = 971

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 367 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 426

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
           || |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 427 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 486

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 487 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 546

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| |||||||||||||||||||||||
Sbjct: 547 atccagaaggagtcgaccctgcacctggtcct 578
</PRE>


<PRE>

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 595 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 654

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 655 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 714

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 715 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 774

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||||||||||||||||||||
Sbjct: 775 atccagaaagagtcgaccctgcacctggtcct 806
</PRE>


<PRE>

 Score =  268 bits (135), Expect = 4e-69
 Identities = 199/219 (90%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 132 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 191

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
           ||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 192 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 251

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
           ||||||||||||||||||||||||||||||||| |||||||||||| | ||  | |||||
Sbjct: 252 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 311

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||| |||||||||||||||||||||||
Sbjct: 312 ctacaacatccagaaggagtcgaccctgcacctggtcct 350
</PRE>


<PRE>
><a name = 21410248></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=21410248&dopt=GenBank" >gb|BC031027.1|</a> Homo sapiens, clone MGC:32826 IMAGE:4715377, mRNA, complete cds
          Length = 919

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 327 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 386

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
           || |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 387 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 446

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 447 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 506

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| |||||||||||||||||||||||
Sbjct: 507 atccagaaggagtcgaccctgcacctggtcct 538
</PRE>


<PRE>

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 555 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 614

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 615 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 674

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 675 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 734

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||||||||||||||||||||
Sbjct: 735 atccagaaagagtcgaccctgcacctggtcct 766
</PRE>


<PRE>

 Score =  268 bits (135), Expect = 4e-69
 Identities = 199/219 (90%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 92  ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 151

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
           ||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 152 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 211

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
           ||||||||||||||||||||||||||||||||| |||||||||||| | ||  | |||||
Sbjct: 212 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 271

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||| |||||||||||||||||||||||
Sbjct: 272 ctacaacatccagaaggagtcgaccctgcacctggtcct 310
</PRE>


<PRE>
><a name = 20070822></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=20070822&dopt=GenBank" >gb|BC026301.1|</a> Homo sapiens, clone MGC:24729 IMAGE:4280629, mRNA, complete cds
          Length = 957

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 325 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 384

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
           || |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 385 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 444

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 445 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 504

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| |||||||||||||||||||||||
Sbjct: 505 atccagaaggagtcgaccctgcacctggtcct 536
</PRE>


<PRE>

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 553 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 612

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 613 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 672

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 673 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 732

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||||||||||||||||||||
Sbjct: 733 atccagaaagagtcgaccctgcacctggtcct 764
</PRE>


<PRE>

 Score =  268 bits (135), Expect = 4e-69
 Identities = 199/219 (90%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 90  ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 149

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
           ||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 150 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 209

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
           ||||||||||||||||||||||||||||||||| |||||||||||| | ||  | |||||
Sbjct: 210 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 269

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||| |||||||||||||||||||||||
Sbjct: 270 ctacaacatccagaaggagtcgaccctgcacctggtcct 308
</PRE>


<PRE>
><a name = 18308345></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=18308345&dopt=GenBank" >gb|AC093484.2|</a> Homo sapiens chromosome , clone RP11-138I1, complete sequence
          Length = 170944

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                          
Query: 64     atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
              ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 102925 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 102984

                                                                          
Query: 124    gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
              || |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 102985 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 103044

                                                                          
Query: 183    cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
              |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 103045 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 103104

                                              
Query: 243    atccagaaagagtcgaccctgcacctggtcct 274
              |||||||| |||||||||||||||||||||||
Sbjct: 103105 atccagaaggagtcgaccctgcacctggtcct 103136
</PRE>


<PRE>

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                          
Query: 64     atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
              ||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 103153 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 103212

                                                                          
Query: 124    gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
              || |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 103213 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 103272

                                                                          
Query: 183    cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
              |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 103273 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 103332

                                              
Query: 243    atccagaaagagtcgaccctgcacctggtcct 274
              ||||||||||||||||||||||||||||||||
Sbjct: 103333 atccagaaagagtcgaccctgcacctggtcct 103364
</PRE>


<PRE>

 Score =  268 bits (135), Expect = 4e-69
 Identities = 199/219 (90%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                          
Query: 57     ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
              |||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 102690 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 102749

                                                                          
Query: 117    gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
              ||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 102750 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 102809

                                                                          
Query: 176    cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
              ||||||||||||||||||||||||||||||||| |||||||||||| | ||  | |||||
Sbjct: 102810 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 102869

                                                     
Query: 236    ttacaacatccagaaagagtcgaccctgcacctggtcct 274
               |||||||||||||| |||||||||||||||||||||||
Sbjct: 102870 ctacaacatccagaaggagtcgaccctgcacctggtcct 102908
</PRE>


<PRE>
><a name = 15929388></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=15929388&dopt=GenBank" >gb|BC015127.1|BC015127</a> Homo sapiens, clone MGC:24232 IMAGE:3929901, mRNA, complete cds
          Length = 965

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 329 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 388

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
           || |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 389 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 448

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 449 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 508

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| |||||||||||||||||||||||
Sbjct: 509 atccagaaggagtcgaccctgcacctggtcct 540
</PRE>


<PRE>

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 557 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 616

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 617 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 676

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 677 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 736

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||||||||||||||||||||
Sbjct: 737 atccagaaagagtcgaccctgcacctggtcct 768
</PRE>


<PRE>

 Score =  268 bits (135), Expect = 4e-69
 Identities = 199/219 (90%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 94  ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 153

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
           ||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 154 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 213

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
           ||||||||||||||||||||||||||||||||| |||||||||||| | ||  | |||||
Sbjct: 214 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 273

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||| |||||||||||||||||||||||
Sbjct: 274 ctacaacatccagaaggagtcgaccctgcacctggtcct 312
</PRE>


<PRE>
><a name = 14424551></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=14424551&dopt=GenBank" >gb|BC009301.1|BC009301</a> Homo sapiens, clone MGC:16688 IMAGE:4126622, mRNA, complete cds
          Length = 952

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 322 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 381

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
           || |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 382 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 441

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 442 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 501

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| |||||||||||||||||||||||
Sbjct: 502 atccagaaggagtcgaccctgcacctggtcct 533
</PRE>


<PRE>

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 550 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 609

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 610 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 669

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 670 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 729

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||||||||||||||||||||
Sbjct: 730 atccagaaagagtcgaccctgcacctggtcct 761
</PRE>


<PRE>

 Score =  268 bits (135), Expect = 4e-69
 Identities = 199/219 (90%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 87  ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 146

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
           ||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 147 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 206

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
           ||||||||||||||||||||||||||||||||| |||||||||||| | ||  | |||||
Sbjct: 207 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 266

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||| |||||||||||||||||||||||
Sbjct: 267 ctacaacatccagaaggagtcgaccctgcacctggtcct 305
</PRE>


<PRE>
><a name = 12653220></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=12653220&dopt=GenBank" >gb|BC000379.1|BC000379</a> Homo sapiens, ubiquitin B, clone MGC:8385 IMAGE:2820408, mRNA,
           complete cds
          Length = 998

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 376 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 435

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
           || |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 436 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 495

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 496 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 555

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           |||||||| |||||||||||||||||||||||
Sbjct: 556 atccagaaggagtcgaccctgcacctggtcct 587
</PRE>


<PRE>

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 604 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 663

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 664 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 723

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 724 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 783

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||||||||||||||||||||
Sbjct: 784 atccagaaagagtcgaccctgcacctggtcct 815
</PRE>


<PRE>

 Score =  260 bits (131), Expect = 9e-67
 Identities = 198/219 (90%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 141 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 200

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccc 175
           ||||||||| |||||||| |||||||||||||||||||||||||| || |||| ||||||
Sbjct: 201 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 260

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
           ||||||||||||||||||||||||||||||||| |||||||| ||| | ||  | |||||
Sbjct: 261 cgaccagcagaggctcatctttgcaggcaagcagctggaagacggccgtactctttctga 320

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||| |||||||||||||||||||||||
Sbjct: 321 ctacaacatccagaaggagtcgaccctgcacctggtcct 359
</PRE>


<PRE>
><a name = 6647297></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=06647297&dopt=GenBank" >emb|X04803.2|HSYUBG1</a> Homo sapiens ubiquitin gene
          Length = 3107

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 2311 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 2370

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
            || |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 2371 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 2430

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 2431 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 2490

                                            
Query: 243  atccagaaagagtcgaccctgcacctggtcct 274
            |||||||| |||||||||||||||||||||||
Sbjct: 2491 atccagaaggagtcgaccctgcacctggtcct 2522
</PRE>


<PRE>

 Score =  268 bits (135), Expect = 4e-69
 Identities = 199/219 (90%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                        
Query: 57   ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
            |||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 2076 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 2135

                                                                        
Query: 117  gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
            ||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 2136 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 2195

                                                                        
Query: 176  cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            ||||||||||||||||||||||||||||||||| |||||||||||| | ||  | |||||
Sbjct: 2196 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 2255

                                                   
Query: 236  ttacaacatccagaaagagtcgaccctgcacctggtcct 274
             |||||||||||||| |||||||||||||||||||||||
Sbjct: 2256 ctacaacatccagaaggagtcgaccctgcacctggtcct 2294
</PRE>


<PRE>

 Score =  262 bits (132), Expect = 2e-67
 Identities = 193/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||||| |||||||||||| |||||||||||||| || ||  |||||||||||
Sbjct: 2539 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaagtggagcccagt 2598

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
            || |||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 2599 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatccctcccgaccag 2658

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 2659 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 2718

                                            
Query: 243  atccagaaagagtcgaccctgcacctggtcct 274
            |||||||| |||||||||||||||||||||||
Sbjct: 2719 atccagaaggagtcgaccctgcacctggtcct 2750
</PRE>


<PRE>
><a name = 14488116></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=14488116&dopt=GenBank" >emb|AL356460.3|HS84M10</a> Homo sapiens chromosome 17 from PAC 84M10 map17p11.2  region
            D17S842-D17S953, complete sequence
          Length = 161943

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Minus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 7361 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 7302

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
            || |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 7301 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 7242

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 7241 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 7182

                                            
Query: 243  atccagaaagagtcgaccctgcacctggtcct 274
            |||||||| |||||||||||||||||||||||
Sbjct: 7181 atccagaaggagtcgaccctgcacctggtcct 7150
</PRE>


<PRE>

 Score =  278 bits (140), Expect = 4e-72
 Identities = 195/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Minus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 7133 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 7074

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
            || |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 7073 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 7014

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            |||||||||||||||||||||||||| |||||||||||| ||||  | ||||| ||||||
Sbjct: 7013 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 6954

                                            
Query: 243  atccagaaagagtcgaccctgcacctggtcct 274
            ||||||||||||||||||||||||||||||||
Sbjct: 6953 atccagaaagagtcgaccctgcacctggtcct 6922
</PRE>


<PRE>

 Score =  268 bits (135), Expect = 4e-69
 Identities = 199/219 (90%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                        
Query: 57   ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
            |||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 7596 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 7537

                                                                        
Query: 117  gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
            ||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 7536 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 7477

                                                                        
Query: 176  cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            ||||||||||||||||||||||||||||||||| |||||||||||| | ||  | |||||
Sbjct: 7476 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 7417

                                                   
Query: 236  ttacaacatccagaaagagtcgaccctgcacctggtcct 274
             |||||||||||||| |||||||||||||||||||||||
Sbjct: 7416 ctacaacatccagaaggagtcgaccctgcacctggtcct 7378
</PRE>


<PRE>
><a name = 20163047></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=20163047&dopt=GenBank" >gb|AC068902.20|</a> Mus musculus clone rp23-151l10, complete sequence
          Length = 199514

 Score =  276 bits (139), Expect = 2e-71
 Identities = 199/219 (90%)
 Strand = Plus / Minus

                                                                          
Query: 57     ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
              |||||||||||| ||||||  || ||||||||||||||||||| ||||| ||||| ||||
Sbjct: 191585 ggtcaaaatgcagatcttcacgacgaccctgactggcaagaccctcaccttagaggtgga 191526

                                                                          
Query: 117    gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
              ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 191525 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatccccct 191466

                                                                          
Query: 177    gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgat 236
              |||||||||||||| |||||||| |||||||| || ||||||||| ||||  ||||||||
Sbjct: 191465 gaccagcagaggctgatctttgctggcaagcagctagaagatggccgcactctctctgat 191406

                                                     
Query: 237    tacaacatccagaaagagtcgaccctgcacctggtcctc 275
              |||||||||||||||||||   |||||||||||||||||
Sbjct: 191405 tacaacatccagaaagagtgagccctgcacctggtcctc 191367
</PRE>


<PRE>
><a name = 15680082></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=15680082&dopt=GenBank" >gb|BC014367.1|BC014367</a> Homo sapiens, Similar to orosomucoid 1, clone MGC:24263
           IMAGE:3934516, mRNA, complete cds
          Length = 790

 Score =  276 bits (139), Expect = 2e-71
 Identities = 200/219 (91%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 100 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 159

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
           ||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 160 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 219

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
           ||||||||||||||||||||||||||||||||| |||||||||||| ||||  | |||||
Sbjct: 220 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctga 279

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||| |||||||||||||||||||||||
Sbjct: 280 ctacaacatccagaaggagtcgaccctgcacctggtcct 318
</PRE>


<PRE>
><a name = 20068526></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=20068526&dopt=GenBank" >emb|AL603923.7|</a> Mouse DNA sequence from clone RP23-180L15 on chromosome 11, complete
             sequence
          Length = 141596

 Score =  276 bits (139), Expect = 2e-71
 Identities = 199/219 (90%)
 Strand = Plus / Plus

                                                                         
Query: 57    ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
             |||||||||||| ||||||  || ||||||||||||||||||| ||||| ||||| ||||
Sbjct: 74964 ggtcaaaatgcagatcttcacgacgaccctgactggcaagaccctcaccttagaggtgga 75023

                                                                         
Query: 117   gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
             ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 75024 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatccccct 75083

                                                                         
Query: 177   gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgat 236
             |||||||||||||| |||||||| |||||||| || ||||||||| ||||  ||||||||
Sbjct: 75084 gaccagcagaggctgatctttgctggcaagcagctagaagatggccgcactctctctgat 75143

                                                    
Query: 237   tacaacatccagaaagagtcgaccctgcacctggtcctc 275
             |||||||||||||||||||   |||||||||||||||||
Sbjct: 75144 tacaacatccagaaagagtgagccctgcacctggtcctc 75182
</PRE>


<PRE>
><a name = 323207></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00323207&dopt=GenBank" >gb|M62431.1|BVDCP1</a> Bovine viral diarrhea virus CP1 putative helcase/protease mRNA,
            partial cds
          Length = 5688

 Score =  270 bits (136), Expect = 9e-70
 Identities = 194/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 2968 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 3027

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
            || ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 3028 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 3087

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            ||||||||||||||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 3088 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 3147

                                            
Query: 243  atccagaaagagtcgaccctgcacctggtcct 274
            ||||||||||||||||||||||||||||||||
Sbjct: 3148 atccagaaagagtcgaccctgcacctggtcct 3179
</PRE>


<PRE>

 Score =  159 bits (80), Expect = 2e-36
 Identities = 114/124 (91%), Gaps = 1/124 (0%)
 Strand = Plus / Plus

                                                                        
Query: 153  ccaggataaagagggcatcccccc-gaccagcagaggctcatctttgcaggcaagcaact 211
            ||||||||| || ||||| ||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 2829 ccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagct 2888

                                                                        
Query: 212  ggaagatggctgcaccttctctgattacaacatccagaaagagtcgaccctgcacctggt 271
            |||||||||| ||||  | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2889 ggaagatggccgcactctttctgattacaacatccagaaagagtcgaccctgcacctggt 2948

                
Query: 272  cctc 275
            ||||
Sbjct: 2949 cctc 2952
</PRE>


<PRE>
><a name = 24942955></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=24942955&dopt=GenBank" >gb|AC087575.11|</a> Homo sapiens chromosome 17, clone RP11-305L6, complete sequence
          Length = 198756

 Score =  268 bits (135), Expect = 4e-69
 Identities = 192/211 (90%)
 Strand = Plus / Minus

                                                                          
Query: 64     atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
              ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 167602 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 167543

                                                                          
Query: 124    gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccccccgaccagc 183
              || |||||||| |||||||||||||||||||| |||||||| ||||||||||||| ||||
Sbjct: 167542 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatccccccgatcagc 167483

                                                                          
Query: 184    agaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaaca 243
              ||||||||||||||||||||||||| |||||||||||| | ||  | ||||| |||||||
Sbjct: 167482 agaggctcatctttgcaggcaagcagctggaagatggcggtactctttctgactacaaca 167423

                                             
Query: 244    tccagaaagagtcgaccctgcacctggtcct 274
              ||||||| |||||||||||||||||||||||
Sbjct: 167422 tccagaaggagtcgaccctgcacctggtcct 167392
</PRE>


<PRE>

 Score =  262 bits (132), Expect = 2e-67
 Identities = 193/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Minus

                                                                          
Query: 64     atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
              ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 167830 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 167771

                                                                          
Query: 124    gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
              || |||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 167770 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 167711

                                                                          
Query: 183    cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
              |||||||||||||||||||||||||| |||||||||||| |||   | ||||| ||||||
Sbjct: 167710 cagaggctcatctttgcaggcaagcagctggaagatggccgcagtctttctgactacaac 167651

                                              
Query: 243    atccagaaagagtcgaccctgcacctggtcct 274
              ||||||||||||||||||||||| ||||||||
Sbjct: 167650 atccagaaagagtcgaccctgcatctggtcct 167619
</PRE>


<PRE>

 Score =  242 bits (122), Expect = 2e-61
 Identities = 186/206 (90%), Gaps = 1/206 (0%)
 Strand = Plus / Minus

                                                                          
Query: 70     atcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagtgaaacc 129
              ||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||| |||
Sbjct: 167369 atcttcgtgaagaccctgactggaaagaccatcaccctggaggtggagcccagtgacacc 167310

                                                                          
Query: 130    atcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccagcagagg 188
              ||||| |||||||| ||||||||||||||| |||| ||||| |||||||| |||||||||
Sbjct: 167309 atcgaaaatgtgaaagccaagatccaggatgaagaaggcatcccccccgatcagcagagg 167250

                                                                          
Query: 189    ctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaacatccag 248
              |||||||||||||||||| |  ||||||||||| ||||  | ||||| |||| |||||||
Sbjct: 167249 ctcatctttgcaggcaagaagttggaagatggccgcactctttctgactacagcatccag 167190

                                        
Query: 249    aaagagtcgaccctgcacctggtcct 274
              ||||||||||||||||||||||||||
Sbjct: 167189 aaagagtcgaccctgcacctggtcct 167164
</PRE>


<PRE>

 Score =  172 bits (87), Expect = 2e-40
 Identities = 187/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                          
Query: 57     ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
              |||||||||||  ||||||| ||| ||||| || ||||||| ||||||||| ||  ||||
Sbjct: 168065 ggtcaaaatgcggatcttcgtgaaaacccttaccggcaagatcatcacccttgaagtgga 168006

                                                                          
Query: 117    gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccc 175
              ||||||||  || ||||| ||||| || ||||| ||||| |||||||| |||| ||||  
Sbjct: 168005 gcccagtgccactatcgaaaatgtcaaagccaaaatccaagataaagaaggcaatccctg 167946

                                                                          
Query: 176    cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
               |||||||||||||||||||||||||||||||| | |||||||||| |||   | |||||
Sbjct: 167945 tgaccagcagaggctcatctttgcaggcaagcagcgggaagatggccgcagtctttctga 167886

                                                     
Query: 236    ttacaacatccagaaagagtcgaccctgcacctggtcct 274
               ||||||||||||||||||||||||||||| ||||||||
Sbjct: 167885 ctacaacatccagaaagagtcgaccctgcatctggtcct 167847
</PRE>


<PRE>
><a name = 22064817></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=22064817&dopt=GenBank" >ref|XM_170833.1|</a> Homo sapiens similar to polyubiquitin (UBQ10) (LOC254746), mRNA
          Length = 1153

 Score =  268 bits (135), Expect = 4e-69
 Identities = 192/211 (90%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 552 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 611

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccccccgaccagc 183
           || |||||||| |||||||||||||||||||| |||||||| ||||||||||||| ||||
Sbjct: 612 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatccccccgatcagc 671

                                                                       
Query: 184 agaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaaca 243
           ||||||||||||||||||||||||| |||||||||||| | ||  | ||||| |||||||
Sbjct: 672 agaggctcatctttgcaggcaagcagctggaagatggcggtactctttctgactacaaca 731

                                          
Query: 244 tccagaaagagtcgaccctgcacctggtcct 274
           ||||||| |||||||||||||||||||||||
Sbjct: 732 tccagaaggagtcgaccctgcacctggtcct 762
</PRE>


<PRE>

 Score =  262 bits (132), Expect = 2e-67
 Identities = 193/212 (91%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 324 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 383

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
           || |||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 384 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 443

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| |||   | ||||| ||||||
Sbjct: 444 cagaggctcatctttgcaggcaagcagctggaagatggccgcagtctttctgactacaac 503

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||||||||||| ||||||||
Sbjct: 504 atccagaaagagtcgaccctgcatctggtcct 535
</PRE>


<PRE>

 Score =  242 bits (122), Expect = 2e-61
 Identities = 186/206 (90%), Gaps = 1/206 (0%)
 Strand = Plus / Plus

                                                                       
Query: 70  atcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagtgaaacc 129
           ||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||| |||
Sbjct: 785 atcttcgtgaagaccctgactggaaagaccatcaccctggaggtggagcccagtgacacc 844

                                                                       
Query: 130 atcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccagcagagg 188
           ||||| |||||||| ||||||||||||||| |||| ||||| |||||||| |||||||||
Sbjct: 845 atcgaaaatgtgaaagccaagatccaggatgaagaaggcatcccccccgatcagcagagg 904

                                                                       
Query: 189 ctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaacatccag 248
           |||||||||||||||||| |  ||||||||||| ||||  | ||||| |||| |||||||
Sbjct: 905 ctcatctttgcaggcaagaagttggaagatggccgcactctttctgactacagcatccag 964

                                     
Query: 249 aaagagtcgaccctgcacctggtcct 274
           ||||||||||||||||||||||||||
Sbjct: 965 aaagagtcgaccctgcacctggtcct 990
</PRE>


<PRE>

 Score =  172 bits (87), Expect = 2e-40
 Identities = 187/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||  ||||||| ||| ||||| || ||||||| ||||||||| ||  ||||
Sbjct: 89  ggtcaaaatgcggatcttcgtgaaaacccttaccggcaagatcatcacccttgaagtgga 148

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccc 175
           ||||||||  || ||||| ||||| || ||||| ||||| |||||||| |||| ||||  
Sbjct: 149 gcccagtgccactatcgaaaatgtcaaagccaaaatccaagataaagaaggcaatccctg 208

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            |||||||||||||||||||||||||||||||| | |||||||||| |||   | |||||
Sbjct: 209 tgaccagcagaggctcatctttgcaggcaagcagcgggaagatggccgcagtctttctga 268

                                                  
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
            ||||||||||||||||||||||||||||| ||||||||
Sbjct: 269 ctacaacatccagaaagagtcgaccctgcatctggtcct 307
</PRE>


<PRE>
><a name = 323229></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00323229&dopt=GenBank" >gb|M96687.1|BVDPP</a> Bovine viral diarrhea virus polyprotein gene, complete cds
          Length = 12480

 Score =  262 bits (132), Expect = 2e-67
 Identities = 196/216 (90%), Gaps = 1/216 (0%)
 Strand = Plus / Plus

                                                                        
Query: 61   aaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagccc 120
            |||||||| ||||||| ||| |||||||| |||| |||||||||||| ||| ||||||||
Sbjct: 5151 aaaatgcagatcttcgtgaaaaccctgaccggcaggaccatcaccctggaggtggagccc 5210

                                                                        
Query: 121  agtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gac 179
            ||||| ||||||||||| ||||||||||||||||||||||| || ||||| ||||| |||
Sbjct: 5211 agtgacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgac 5270

                                                                        
Query: 180  cagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattac 239
            |||||||||||||||||||| |||||||| |||||||||||| || |  | |||||||||
Sbjct: 5271 cagcagaggctcatctttgccggcaagcagctggaagatggccgctctctttctgattac 5330

                                                
Query: 240  aacatccagaaagagtcgaccctgcacctggtcctc 275
            ||||||||||||||||||||||||||||||||||||
Sbjct: 5331 aacatccagaaagagtcgaccctgcacctggtcctc 5366
</PRE>


<PRE>
><a name = 24047132></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=24047132&dopt=GenBank" >ref|NG_002287.1|</a> Homo sapiens ubiquitin B pseudogene 2 (UBBP2) on chromosome 1
          Length = 647

 Score =  258 bits (130), Expect = 4e-66
 Identities = 197/218 (90%), Gaps = 1/218 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| |||||||||||||||||||||||||||||| ||  ||||
Sbjct: 181 ggtcaaaatgcagatcttcgtgaagaccctgactggcaagaccatcacccttgaagtgga 240

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcc-ccc 175
           ||||||||| |||||||| |||||||||||||| ||||||||||| || ||||||| |||
Sbjct: 241 gcccagtgacaccatcgaaaatgtgaaggccaatatccaggataaggaaggcatcctccc 300

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
           ||||||||||||||||||||||||||||| ||| || ||||||||||| ||  | |||||
Sbjct: 301 cgaccagcagaggctcatctttgcaggcatgcagctagaagatggctgtactctttctga 360

                                                 
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcc 273
            ||||||||||||||||||| ||||||| |||||||||
Sbjct: 361 ctacaacatccagaaagagttgaccctgtacctggtcc 398
</PRE>


<PRE>
><a name = 37582></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00037582&dopt=GenBank" >emb|X04802.1|HSUBPSE2</a> Homo sapiens UBBP2 pseudogene for ubiquitin UBB
          Length = 647

 Score =  258 bits (130), Expect = 4e-66
 Identities = 197/218 (90%), Gaps = 1/218 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           |||||||||||| ||||||| |||||||||||||||||||||||||||||| ||  ||||
Sbjct: 181 ggtcaaaatgcagatcttcgtgaagaccctgactggcaagaccatcacccttgaagtgga 240

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcc-ccc 175
           ||||||||| |||||||| |||||||||||||| ||||||||||| || ||||||| |||
Sbjct: 241 gcccagtgacaccatcgaaaatgtgaaggccaatatccaggataaggaaggcatcctccc 300

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
           ||||||||||||||||||||||||||||| ||| || ||||||||||| ||  | |||||
Sbjct: 301 cgaccagcagaggctcatctttgcaggcatgcagctagaagatggctgtactctttctga 360

                                                 
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcc 273
            ||||||||||||||||||| ||||||| |||||||||
Sbjct: 361 ctacaacatccagaaagagttgaccctgtacctggtcc 398
</PRE>


<PRE>
><a name = 323216></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00323216&dopt=GenBank" >gb|M87812.1|BVDMSEQH</a> Bovine viral diarrhea virus mRNA sequence
          Length = 768

 Score =  254 bits (128), Expect = 6e-65
 Identities = 192/212 (90%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 282 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 341

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
           || ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 342 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 401

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||| | |||||| |||||||| |||||||||||| ||||  | ||||||||||||
Sbjct: 402 cagaggcttacctttgccggcaagcagctggaagatggccgcactctttctgattacaac 461

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||||||||||||||||||||
Sbjct: 462 atccagaaagagtcgaccctgcacctggtcct 493
</PRE>


<PRE>

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 248 gaaagagtcgaccctgcacctggtcctc 275
           ||||||||||||||||||||||||||||
Sbjct: 239 gaaagagtcgaccctgcacctggtcctc 266
</PRE>


<PRE>
><a name = 9837283></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=09837283&dopt=GenBank" >gb|AF285161.1|AF285161</a> Mus musculus cell-line C3H/He polyubiquitin C (Ubc) gene, complete
            cds
          Length = 3756

 Score =  246 bits (124), Expect = 1e-62
 Identities = 191/212 (90%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||| | |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 3067 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtggagcccagt 3126

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
            || ||||| |||||||| ||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 3127 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 3186

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            |||||||| ||||||||||||||||| |||||||||||| ||||| | || || ||||||
Sbjct: 3187 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 3246

                                            
Query: 243  atccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||| |||||||||||||||||
Sbjct: 3247 atccagaaagagtccaccctgcacctggtcct 3278
</PRE>


<PRE>

 Score =  246 bits (124), Expect = 1e-62
 Identities = 191/212 (90%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||| | |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 3295 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtggagcccagt 3354

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
            || ||||| |||||||| ||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 3355 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 3414

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            |||||||| ||||||||||||||||| |||||||||||| ||||| | || || ||||||
Sbjct: 3415 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 3474

                                            
Query: 243  atccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||| |||||||||||||||||
Sbjct: 3475 atccagaaagagtccaccctgcacctggtcct 3506
</PRE>


<PRE>

 Score =  246 bits (124), Expect = 1e-62
 Identities = 191/212 (90%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||| | |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 2611 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtggagcccagt 2670

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
            || ||||| |||||||| ||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 2671 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2730

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            |||||||| ||||||||||||||||| |||||||||||| ||||| | || || ||||||
Sbjct: 2731 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2790

                                            
Query: 243  atccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||| |||||||||||||||||
Sbjct: 2791 atccagaaagagtccaccctgcacctggtcct 2822
</PRE>


<PRE>

 Score =  238 bits (120), Expect = 3e-60
 Identities = 190/212 (89%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||| | |||||||||||| ||||||||||||||||| ||| | |||||||||
Sbjct: 1699 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1758

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
            || ||||| |||||||| ||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 1759 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1818

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            |||||||| ||||||||||||||||| |||||||||||| ||||| | || || ||||||
Sbjct: 1819 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1878

                                            
Query: 243  atccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||| |||||||||||||||||
Sbjct: 1879 atccagaaagagtccaccctgcacctggtcct 1910
</PRE>


<PRE>

 Score =  238 bits (120), Expect = 3e-60
 Identities = 190/212 (89%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||| | |||||||||||| ||||||||||||||||| ||| | |||||||||
Sbjct: 2839 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2898

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
            || ||||| |||||||| ||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 2899 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2958

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            |||||||| ||||||||||||||||| |||||||||||| ||||| | || || ||||||
Sbjct: 2959 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 3018

                                            
Query: 243  atccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||| |||||||||||||||||
Sbjct: 3019 atccagaaagagtccaccctgcacctggtcct 3050
</PRE>


<PRE>

 Score =  230 bits (116), Expect = 8e-58
 Identities = 189/212 (89%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||| | ||| |||||||| ||||||||||||||||| ||| | |||||||||
Sbjct: 2383 atgcagatctttgtgaaaaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2442

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
            || ||||| |||||||| ||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 2443 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2502

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            |||||||| ||||||||||||||||| |||||||||||| ||||| | || || ||||||
Sbjct: 2503 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2562

                                            
Query: 243  atccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||| |||||||||||||||||
Sbjct: 2563 atccagaaagagtccaccctgcacctggtcct 2594
</PRE>


<PRE>

 Score =  230 bits (116), Expect = 8e-58
 Identities = 189/212 (89%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||| | |||||||||||| ||||||||||||||||| ||| | |||||||||
Sbjct: 2155 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2214

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
            || ||||| |||||||| ||||| ||||||||||| || ||||||||| |||| ||||||
Sbjct: 2215 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatctcccctgaccag 2274

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            |||||||| ||||||||||||||||| |||||||||||| ||||| | || || ||||||
Sbjct: 2275 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2334

                                            
Query: 243  atccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||| |||||||||||||||||
Sbjct: 2335 atccagaaagagtccaccctgcacctggtcct 2366
</PRE>


<PRE>

 Score =  230 bits (116), Expect = 8e-58
 Identities = 189/212 (89%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                        
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
            ||||| ||||| | |||||||||||| ||||||||||||||||| ||| | |||||||||
Sbjct: 1927 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1986

                                                                        
Query: 124  gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
            || || || |||||||| ||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 1987 gacactatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2046

                                                                        
Query: 183  cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
            |||||||| ||||||||||||||||| |||||||||||| ||||| | || || ||||||
Sbjct: 2047 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2106

                                            
Query: 243  atccagaaagagtcgaccctgcacctggtcct 274
            |||||||||||||| |||||||||||||||||
Sbjct: 2107 atccagaaagagtccaccctgcacctggtcct 2138
</PRE>


<PRE>

 Score =  214 bits (108), Expect = 5e-53
 Identities = 169/188 (89%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                        
Query: 88   actggcaagaccatcaccctagagatggagcccagtgaaaccatcgagaatgtgaaggcc 147
            ||||| |||||||||||||| ||| | ||||||||||| ||||| |||||||| ||||| 
Sbjct: 1495 actggtaagaccatcaccctggaggtcgagcccagtgacaccattgagaatgtcaaggca 1554

                                                                        
Query: 148  aagatccaggataaagagggcatcccccc-gaccagcagaggctcatctttgcaggcaag 206
            ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 1555 aagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaag 1614

                                                                        
Query: 207  caactggaagatggctgcaccttctctgattacaacatccagaaagagtcgaccctgcac 266
            || |||||||||||| ||||| | || || |||||||||||||||||||| |||||||||
Sbjct: 1615 cagctggaagatggccgcaccctgtcagactacaacatccagaaagagtccaccctgcac 1674

                    
Query: 267  ctggtcct 274
            ||||||||
Sbjct: 1675 ctggtcct 1682
</PRE>


<PRE>

 Score = 52.0 bits (26), Expect = 4e-04
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                      
Query: 64   atgcaaatcttcgagaagaccctgactggcaagaccatcacc 105
            ||||| ||||| | |||||||||||| |||||||||||||||
Sbjct: 3523 atgcagatctttgtgaagaccctgacaggcaagaccatcacc 3564
</PRE>


<PRE>
><a name = 24047130></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=24047130&dopt=GenBank" >ref|NG_002285.1|</a> Homo sapiens ubiquitin B pseudogene 4 (UBBP4) on chromosome 17
          Length = 1335

 Score =  242 bits (122), Expect = 2e-61
 Identities = 186/206 (90%), Gaps = 1/206 (0%)
 Strand = Plus / Plus

                                                                       
Query: 70  atcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagtgaaacc 129
           ||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||| |||
Sbjct: 782 atcttcgtgaagaccctgactggaaagaccatcaccctggaggtggagcccagtgacacc 841

                                                                       
Query: 130 atcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccagcagagg 188
           ||||| |||||||| ||||||||||||||| |||| ||||| |||||||| |||||||||
Sbjct: 842 atcgaaaatgtgaaagccaagatccaggatgaagaaggcatcccccccgatcagcagagg 901

                                                                       
Query: 189 ctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaacatccag 248
           |||||||||||||||||| |  ||||||||||| ||||  | ||||| |||| |||||||
Sbjct: 902 ctcatctttgcaggcaagaagttggaagatggccgcactctttctgactacagcatccag 961

                                     
Query: 249 aaagagtcgaccctgcacctggtcct 274
           ||||||||||||||||||||||||||
Sbjct: 962 aaagagtcgaccctgcacctggtcct 987
</PRE>


<PRE>

 Score =  240 bits (121), Expect = 8e-61
 Identities = 188/209 (89%), Gaps = 1/209 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 548 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 607

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccccgaccag 182
           || |||||||| |||||||||||||||||||| |||||||| |||| ||||||||| |||
Sbjct: 608 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcantccccccgatcag 667

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| | ||  | ||||| ||||||
Sbjct: 668 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 727

                                        
Query: 243 atccagaaagagtcgaccctgcacctggt 271
           || ||||| ||||||||||||||||||||
Sbjct: 728 attcagaaggagtcgaccctgcacctggt 756
</PRE>


<PRE>

 Score =  238 bits (120), Expect = 3e-60
 Identities = 190/212 (89%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 320 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 379

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
           || |||||||| |||||||||||||||||||| |||||||| ||||| ||||||| || |
Sbjct: 380 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccggccgg 439

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||| |||||||||||| |||||||||||| |||   | ||||| ||||||
Sbjct: 440 cagaggctcatctctgcaggcaagcagctggaagatggccgcagtctttctgactacaac 499

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||||||||||| ||||||||
Sbjct: 500 atccagaaagagtcgaccctgcatctggtcct 531
</PRE>


<PRE>

 Score =  167 bits (84), Expect = 1e-38
 Identities = 184/216 (85%), Gaps = 1/216 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           ||||||||||| |||||||| ||| ||||| || ||||||| ||||||||| ||  ||||
Sbjct: 85  ggtcaaaatgcgaatcttcgtgaaaacccttaccggcaagatcatcacccttgaagtgga 144

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccc 175
           ||||||||  || ||||| ||||| || ||||| ||||| |||||||| |||| ||||  
Sbjct: 145 gcccagtgccactatcgaaaatgtcaaagccaaaatccaagataaagaaggcaatccctg 204

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            |||||||||||||||||||||||||||||||| | |||||||||| |||   | |||||
Sbjct: 205 tgaccagcagaggctcatctttgcaggcaagcagcgggaagatggccgcagtctttctga 264

                                               
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggt 271
            || |||||||||||||||||||||||||| |||||
Sbjct: 265 ctagaacatccagaaagagtcgaccctgcatctggt 300
</PRE>


<PRE>
><a name = 37572></a><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00037572&dopt=GenBank" >emb|X07499.1|HSUBBP</a> Homo sapiens UBBP4 pseudogene for ubiquitin UBB
          Length = 1335

 Score =  242 bits (122), Expect = 2e-61
 Identities = 186/206 (90%), Gaps = 1/206 (0%)
 Strand = Plus / Plus

                                                                       
Query: 70  atcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagtgaaacc 129
           ||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||| |||
Sbjct: 782 atcttcgtgaagaccctgactggaaagaccatcaccctggaggtggagcccagtgacacc 841

                                                                       
Query: 130 atcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccagcagagg 188
           ||||| |||||||| ||||||||||||||| |||| ||||| |||||||| |||||||||
Sbjct: 842 atcgaaaatgtgaaagccaagatccaggatgaagaaggcatcccccccgatcagcagagg 901

                                                                       
Query: 189 ctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaacatccag 248
           |||||||||||||||||| |  ||||||||||| ||||  | ||||| |||| |||||||
Sbjct: 902 ctcatctttgcaggcaagaagttggaagatggccgcactctttctgactacagcatccag 961

                                     
Query: 249 aaagagtcgaccctgcacctggtcct 274
           ||||||||||||||||||||||||||
Sbjct: 962 aaagagtcgaccctgcacctggtcct 987
</PRE>


<PRE>

 Score =  240 bits (121), Expect = 8e-61
 Identities = 188/209 (89%), Gaps = 1/209 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 548 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 607

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccccgaccag 182
           || |||||||| |||||||||||||||||||| |||||||| |||| ||||||||| |||
Sbjct: 608 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcantccccccgatcag 667

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           |||||||||||||||||||||||||| |||||||||||| | ||  | ||||| ||||||
Sbjct: 668 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 727

                                        
Query: 243 atccagaaagagtcgaccctgcacctggt 271
           || ||||| ||||||||||||||||||||
Sbjct: 728 attcagaaggagtcgaccctgcacctggt 756
</PRE>


<PRE>

 Score =  238 bits (120), Expect = 3e-60
 Identities = 190/212 (89%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 64  atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
           ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||
Sbjct: 320 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 379

                                                                       
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
           || |||||||| |||||||||||||||||||| |||||||| ||||| ||||||| || |
Sbjct: 380 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccggccgg 439

                                                                       
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
           ||||||||||||| |||||||||||| |||||||||||| |||   | ||||| ||||||
Sbjct: 440 cagaggctcatctctgcaggcaagcagctggaagatggccgcagtctttctgactacaac 499

                                           
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
           ||||||||||||||||||||||| ||||||||
Sbjct: 500 atccagaaagagtcgaccctgcatctggtcct 531
</PRE>


<PRE>

 Score =  167 bits (84), Expect = 1e-38
 Identities = 184/216 (85%), Gaps = 1/216 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
           ||||||||||| |||||||| ||| ||||| || ||||||| ||||||||| ||  ||||
Sbjct: 85  ggtcaaaatgcgaatcttcgtgaaaacccttaccggcaagatcatcacccttgaagtgga 144

                                                                       
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccc 175
           ||||||||  || ||||| ||||| || ||||| ||||| |||||||| |||| ||||  
Sbjct: 145 gcccagtgccactatcgaaaatgtcaaagccaaaatccaagataaagaaggcaatccctg 204

                                                                       
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
            |||||||||||||||||||||||||||||||| | |||||||||| |||   | |||||
Sbjct: 205 tgaccagcagaggctcatctttgcaggcaagcagcgggaagatggccgcagtctttctga 264

                                               
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggt 271
            || |||||||||||||||||||||||||| |||||
Sbjct: 265 ctagaacatccagaaagagtcgaccctgcatctggt 300
</PRE>


<form>

<PRE>
  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
  or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Nov 24, 2002  6:29 AM
  Number of letters in database: -1,304,953,840
  Number of sequences in database:  1,473,826
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,303,692
Number of Sequences: 1473826
Number of extensions: 1303692
Number of successful extensions: 26770
Number of sequences better than 10.0: 790
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 22844
Number of HSP's gapped (non-prelim): 2671
length of query: 285
length of database: 7,284,980,748
effective HSP length: 20
effective length of query: 265
effective length of database: 7,255,504,228
effective search space: 1922708620420
effective search space used: 1922708620420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)

</form>