File: k000255.txt

package info (click to toggle)
python-biopython 1.45-3
  • links: PTS, VCS
  • area: main
  • in suites: lenny
  • size: 18,192 kB
  • ctags: 12,310
  • sloc: python: 83,505; xml: 13,834; ansic: 7,015; cpp: 1,855; sql: 1,144; makefile: 179
file content (157 lines) | stat: -rw-r--r-- 5,622 bytes parent folder | download | duplicates (3)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
KADBID      000255
CREATD      11/12/94
LMODIF      11/24/98
DEFINI      IG HEAVY CHAIN VARIABLE REGION
SPECIE      human
AANAME      VH6-FF11'CL
NNNAME      VH6-FF11
AAREFA    1 VARADE,W.S.,MARIN,E.,KITTELBERGER,A.M. & INSEL,R.A. 
AAREFJ    1 J IMMUNOL 150: 4985-4995 (1993)
AAPUBM      8496600
NNREFA    1 VARADE,W.S.,MARIN,E.,KITTELBERGER,A.M. & INSEL,R.A. 
NNREFJ    1 J IMMUNOL 150: 4985-4995 (1993)
NNPUBM      8496600
ANNOTA SRCE PCR AMPLIFIED cDNA FROM SPLEEN OF PATIENT WITH CHRONIC 
ANNOTA SRCE MYELOGENOUS LEUKEMIA
ANNOTA AAIN 100H:  LEU THR THR VAL TYR TYR ASN
ANNOTA NNIN 100H:  ctt acc acc gtc tac tac aac
ANNOTA AANT FOR ALIGNMENT, THE AMINO ACIDS LEU THR THR VAL TYR TYR ASN WERE 
ANNOTA AANT REPLACED BY A # AT POSITION 100H.
ANNOTA NNNT FOR ALIGNMENT, THE CODONS ctt acc acc gtc tac tac aac WERE 
ANNOTA NNNT REPLACED BY A # AT POSITION 100H.
SEQTPA          1     0          
SEQTPA          2     1          
SEQTPA          3     2          
SEQTPA          4     3          
SEQTPA          5     4          
SEQTPA          6     5          
SEQTPA          7     6          
SEQTPA          8     7          
SEQTPA          9     8          
SEQTPA         10     9 cca PRO P
SEQTPA         11    10 gga GLY G
SEQTPA         12    11 ctg LEU L
SEQTPA         13    12 gtg VAL V
SEQTPA         14    13 aag LYS K
SEQTPA         15    14 ccc PRO P
SEQTPA         16    15 tcg SER S
SEQTPA         17    16 cag GLN Q
SEQTPA         18    17 acc THR T
SEQTPA         19    18 ctc LEU L
SEQTPA         20    19 tca SER S
SEQTPA         21    20 ctc LEU L
SEQTPA         22    21 acc THR T
SEQTPA         23    22 tgt CYS C
SEQTPA         24    23 gcc ALA A
SEQTPA         25    24 atc ILE I
SEQTPA         26    25 tcc SER S
SEQTPA         27    26 ggg GLY G
SEQTPA         28    27 gac ASP D
SEQTPA         29    28 agt SER S
SEQTPA         30    29 gtc VAL V
SEQTPA         31    30 tct SER S
SEQTPA         32    31 gac ASP D
SEQTPA         33    32 agg ARG R
SEQTPA         34    33 agt SER S
SEQTPA         35    34 gct ALA A
SEQTPA         36    35 tcc SER S
SEQTPA         37   35A tgg TRP W
SEQTPA         38   35B agc SER S
SEQTPA         39    36 tgg TRP W
SEQTPA         40    37 atc ILE I
SEQTPA         41    38 agg ARG R
SEQTPA         42    39 cag GLN Q
SEQTPA         43    40 tcc SER S
SEQTPA         44    41 cct PRO P
SEQTPA         45    42 tcg SER S
SEQTPA         46    43 aga ARG R
SEQTPA         47    44 ggc GLY G
SEQTPA         48    45 ctt LEU L
SEQTPA         49    46 gag GLU E
SEQTPA         50    47 tgg TRP W
SEQTPA         51    48 ctg LEU L
SEQTPA         52    49 gga GLY G
SEQTPA         53    50 agg ARG R
SEQTPA         54    51 aca THR T
SEQTPA         55    52 tac TYR Y
SEQTPA         56   52A tac TYR Y
SEQTPA         57   52B agg ARG R
SEQTPA         58   52C --- --- -
SEQTPA         59    53 tcc SER S
SEQTPA         60    54 aag LYS K
SEQTPA         61    55 tgg TRP W
SEQTPA         62    56 ttt PHE F
SEQTPA         63    57 agt SER S
SEQTPA         64    58 gat ASP D
SEQTPA         65    59 tat TYR Y
SEQTPA         66    60 gcg ALA A
SEQTPA         67    61 gac ASP D
SEQTPA         68    62 tct SER S
SEQTPA         69    63 gtt VAL V
SEQTPA         70    64 aaa LYS K
SEQTPA         71    65 ggt GLY G
SEQTPA         72    66 cga ARG R
SEQTPA         73    67 ata ILE I
SEQTPA         74    68 atc ILE I
SEQTPA         75    69 gtc VAL V
SEQTPA         76    70 aac ASN N
SEQTPA         77    71 ccg PRO P
SEQTPA         78    72 gac ASP D
SEQTPA         79    73 aca THR T
SEQTPA         80    74 tcc SER S
SEQTPA         81    75 acc THR T
SEQTPA         82    76 aac ASN N
SEQTPA         83    77 cag GLN Q
SEQTPA         84    78 ttc PHE F
SEQTPA         85    79 tcc SER S
SEQTPA         86    80 ctg LEU L
SEQTPA         87    81 cag GLN Q
SEQTPA         88    82 ttg LEU L
SEQTPA         89   82A aac ASN N
SEQTPA         90   82B tct SER S
SEQTPA         91   82C gtg VAL V
SEQTPA         92    83 act THR T
SEQTPA         93    84 ccc PRO P
SEQTPA         94    85 gag GLU E
SEQTPA         95    86 gac ASP D
SEQTPA         96    87 acg THR T
SEQTPA         97    88 gct ALA A
SEQTPA         98    89 gta VAL V
SEQTPA         99    90 tat TYR Y
SEQTPA        100    91 tac TYR Y
SEQTPA        101    92 tgt CYS C
SEQTPA        102    93 gca ALA A
SEQTPA        103    94 aga ARG R
SEQTPA        104    95 gct ALA A
SEQTPA        105    96 ccg PRO P
SEQTPA        106    97 tgg TRP W
SEQTPA        107    98 gcc ALA A
SEQTPA        108    99 cga ARG R
SEQTPA        109   100 cgt ARG R
SEQTPA        110  100A act THR T
SEQTPA        111  100B gat ASP D
SEQTPA        112  100C atg MET M
SEQTPA        113  100D gtt VAL V
SEQTPA        114  100E cgg ARG R
SEQTPA        115  100F gga GLY G
SEQTPA        116  100G ctt LEU L
SEQTPA        117  100H   #   # #
SEQTPA        118  100I tac TYR Y
SEQTPA        119  100J ggt GLY G
SEQTPA        120  100K cta LEU L
SEQTPA        121   101 gac ASP D
SEQTPA        122   102 gtc VAL V
SEQTPA        123   103 tgg TRP W
SEQTPA        124   104 ggc GLY G
SEQTPA        125   105 cca PRO P
SEQTPA        126   106 ggg GLY G
SEQTPA        127   107 acc THR T
SEQTPA        128   108 tgg TRP W
SEQTPA        129   109 gtc VAL V
SEQTPA        130   110 acc THR T
SEQTPA        131   111 gtc VAL V
SEQTPA        132   112 ttc PHE F
SEQTPA        133   113 tca SER S
RECEND|