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METATOOL OUTPUT Version 3.5 (28.03.2001) C:\METATOOL\META35~1.EXE
INPUT FILE: EXAMPLE13.TXT
INTERNAL METABOLITES: 19
REACTIONS: 6
3 external H2O
1 int 5,10-Methylenetetrahydrofolate
1 int glycine
1 int tetrahydrofolate
1 int L-serine
1 int (5-L-Glutamyl)-peptide
1 int an_amino_acid
1 int peptide
1 int 5-L-glutamyl_amino_acid
1 int beta-D-oligosaccarides
1 int n_D-glucose
1 int L-Asparagine
1 int L-aspartate
1 int NH3
1 int ATP
1 int L-Asp
1 int NH4+
1 int AMP
1 int diphosphate
1 int L-Asn
20 metabolites, 22 is the summarized frequency
edges frequency of nodes
0 0
1 19
2 0
3 1
STOICHIOMETRIC MATRIX
matrix dimension r19 x c6
-1 0 0 0 0 0
-1 0 0 0 0 0
1 0 0 0 0 0
1 0 0 0 0 0
0 0 -1 0 0 0
0 0 -1 0 0 0
0 0 1 0 0 0
0 0 1 0 0 0
0 0 0 -1 0 0
0 0 0 1 0 0
0 0 0 0 -1 0
0 0 0 0 1 0
0 0 0 0 1 0
0 0 0 0 0 -1
0 0 0 0 0 -1
0 0 0 0 0 -1
0 0 0 0 0 1
0 0 0 0 0 1
0 0 0 0 0 1
The following line indicates reversible (0) and irreversible reactions (1)
0 1 1 1 1 1
rows and columns are sorted as declared in the inputfile
NOT BALANCED INTERNAL METABOLITES
5,10-Methylenetetrahydrofolate glycine tetrahydrofolate L-serine (5-L-Glutamyl)-peptide an_amino_acid peptide 5-L-glutamyl_amino_acid beta-D-oligosaccarides n_D-glucose L-Asparagine L-aspartate NH3 ATP L-Asp NH4+ AMP diphosphate L-Asn
KERNEL
matrix dimension r1 x c6
0 1 0 0 0 0
6 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section.
enzymes
1: 2.1.2.1 irreversible
overall reaction
- not found -
The remaining overall reactions perform no net transformation of external metabolites.
SUBSETS OF REACTIONS
matrix dimension r1 x c6
0 1 0 0 0 0
6 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section.
enzymes
1: 2.1.2.1 irreversible
overall reaction
- not found -
The remaining overall reactions perform no net transformation of external metabolites.
REDUCED SYSTEM with 19 branch point metabolites in 1 reactions (columns)
matrix dimension r0 x c1
The following line indicates reversible (0) and irreversible reactions (1)
1
-> Branch metabolites are :
met cons built reactions
-> No branch metabolites are :
met cons built reactions
5,10-Methylenetetrahydrofolate 1 0 1 r
glycine 1 0 1 r
tetrahydrofolate 0 1 1 r
L-serine 0 1 1 r
(5-L-Glutamyl)-peptide 1 0 1 i
an_amino_acid 1 0 1 i
peptide 0 1 1 i
5-L-glutamyl_amino_acid 0 1 1 i
beta-D-oligosaccarides 1 0 1 i
n_D-glucose 0 1 1 i
L-Asparagine 1 0 1 i
L-aspartate 0 1 1 i
NH3 0 1 1 i
ATP 1 0 1 i
L-Asp 1 0 1 i
NH4+ 1 0 1 i
AMP 0 1 1 i
diphosphate 0 1 1 i
L-Asn 0 1 1 i
CONVEX BASIS
matrix dimension r1 x c6
0 1 0 0 0 0
enzymes
1: 2.1.2.1 irreversible
overall reaction
- not found -
The remaining overall reactions perform no net transformation of external metabolites.
CONSERVATION RELATIONS
matrix dimension r14 x c19
1 -1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 1 -1 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 1 -1 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 -1 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0
0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1
1 : 5,10-Methylenetetrahydrofolate + glycine = const
2 : 5,10-Methylenetetrahydrofolate + tetrahydrofolate = const
3 : 5,10-Methylenetetrahydrofolate + L-serine = const
4 : (5-L-Glutamyl)-peptide + an_amino_acid = const
5 : (5-L-Glutamyl)-peptide + peptide = const
6 : (5-L-Glutamyl)-peptide + 5-L-glutamyl_amino_acid = const
7 : beta-D-oligosaccarides + n_D-glucose = const
8 : L-Asparagine + L-aspartate = const
9 : L-Asparagine + NH3 = const
10 : ATP + L-Asp = const
11 : ATP + NH4+ = const
12 : ATP + AMP = const
13 : ATP + diphosphate = const
14 : ATP + L-Asn = const
ELEMENTARY MODES
matrix dimension r1 x c6
0 1 0 0 0 0
6 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section.
enzymes
1: 2.1.2.1 irreversible
overall reaction
- not found -
The remaining overall reactions perform no net transformation of external metabolites.
The elementary modes ARE EQUAL to convex basis.
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