1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
|
test_MarkovModel
TESTING train_visible
Training HMM
Classifying
[(['0', '0', '1', '2', '3', '3'], 0.0082128906250000053)]
STATES: 0 1 2 3
ALPHABET: A C G T
INITIAL:
0: 1.00
1: 0.00
2: 0.00
3: 0.00
TRANSITION:
0: 0.20 0.80 0.00 0.00
1: 0.00 0.50 0.50 0.00
2: 0.00 0.00 0.50 0.50
3: 0.00 0.00 0.00 1.00
EMISSION:
0: 0.67 0.11 0.11 0.11
1: 0.08 0.75 0.08 0.08
2: 0.08 0.08 0.75 0.08
3: 0.03 0.03 0.03 0.91
TESTING baum welch
Training HMM
STATES: CP IP
ALPHABET: cola ice_t lem
INITIAL:
CP: 1.00
IP: 0.00
TRANSITION:
CP: 0.02 0.98
IP: 1.00 0.00
EMISSION:
CP: 0.50 0.00 0.50
IP: 0.00 1.00 0.00
NNNN
NNNRRRNNRRNRRN
NRRRRRRRRRRRNNNNRRRRRRRRR
NRRRRRRRRRR
N
|
