File: test_SeqIO_online

package info (click to toggle)
python-biopython 1.45-3
  • links: PTS, VCS
  • area: main
  • in suites: lenny
  • size: 18,192 kB
  • ctags: 12,310
  • sloc: python: 83,505; xml: 13,834; ansic: 7,015; cpp: 1,855; sql: 1,144; makefile: 179
file content (22 lines) | stat: -rw-r--r-- 1,097 bytes parent folder | download 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
 
test_SeqIO_online
Checking Bio.ExPASy.get_sprot_raw()
- Fetching O23729
  Got MAPAMEEIRQAQRAEGPAA...GAE [5Y08l+HJRDIlhLKzFEfkcKd1dkM] len 394
Checking Bio.GenBank.download_many()
- Fetched GI 6273290 as genbank
  Got TATACATTAAAGGAGGGGG...AGA [zCwpm1VfiJWQygly6VckKt3LZp0] len 899
- Fetched GI 6273289 as genbank
  Got TATACATTAAAGGAGGGGG...AGA [NQq+W2hMHMiMbv/pnUIQjM+ebEw] len 899
Checking Bio.GenBank.NCBIDictionary()
- Fetching X52960 from genome as fasta
  Got TGGCTCGAACTGACTAGAA...GCT [Ktxz0HgMlhQmrKTuZpOxPZJ6zGU] len 248
- Fetching X52960 from genome as genbank
  Got TGGCTCGAACTGACTAGAA...GCT [Ktxz0HgMlhQmrKTuZpOxPZJ6zGU] len 248
- Fetching 6273291 from nucleotide as fasta
  Got TATACATTAAAGGAGGGGG...AGA [bLhlq4mEFJOoS9PieOx4nhGnjAQ] len 902
- Fetching 6273291 from nucleotide as genbank
  Got TATACATTAAAGGAGGGGG...AGA [bLhlq4mEFJOoS9PieOx4nhGnjAQ] len 902
- Fetching 16130152 from protein as fasta
  Got MKVKVLSLLVPALLVAGAA...YQF [fCjcjMFeGIrilHAn6h+yju267lg] len 367
- Fetching 16130152 from protein as genbank
  Got MKVKVLSLLVPALLVAGAA...YQF [fCjcjMFeGIrilHAn6h+yju267lg] len 367