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<HTML>
<HEAD>
<TITLE>BLAST Search Results </TITLE>
</HEAD>
<BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#660099">
<A HREF="http://www.ncbi.nlm.nih.gov/BLAST/blast_form.map"> <IMG SRC="http://www.ncbi.nlm.nih.gov/BLAST/blast_results.gif" BORDER=0 ISMAP></A>
<BR><BR><PRE>
<b>BLASTN 2.0.10 [Aug-26-1999]</b>
<b><a href="http://www.ncbi.nlm.nih.gov/htbin-
post/Entrez/query?uid=9254694&form=6&db=m&Dopt=r">Reference</a>:</b>
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
<p>
<b>Query=</b> gi|1348916|gb|G26684.1|G26684 human STS STS_D11570.
(285 letters)
<b>Database:</b> Non-redundant Database of GenBank STS Division
89,405 sequences; 32,867,852 total letters
<p> <p>If you have any problems or questions with the results of this search <br>please refer to the <b><a href=http://www.ncbi.nlm.nih.gov/BLAST/blast_FAQs.html>BLAST FAQs</a></b><br><p>
<FORM NAME="BLASTFORM">
</PRE>
<CENTER>
<H3><a href="/BLAST/newoptions.html#graphical-overview"> Distribution of 4 Blast Hits on the Query Sequence</a></H3>
<input name=defline size=80 value="Mouse-over to show defline and scores. Click to show alignments">
</CENTER>
<map name=img_map>
<area shape=rect coords=69,101,523,106 href="#1348916" ONMOUSEOVER='document.BLASTFORM.defline.value="G26684 human STS STS_D11570. gi|1375195|gb|G26945|G26945 huma..S= 517 E=1e-146"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=403,108,432,113 href="#6120827" ONMOUSEOVER='document.BLASTFORM.defline.value="G55508 SHGC-100856 Human Homo sapiens STS genomic, sequence tagge..S=32.2 E=1.7"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=421,115,445,120 href="#4516686" ONMOUSEOVER='document.BLASTFORM.defline.value="AU026763 Rattus norvegicus, OTSUKA clone, OT33.16/752f07, microsa..S=32.2 E=1.7"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=483,108,507,113 href="#720683" ONMOUSEOVER='document.BLASTFORM.defline.value="G03725 human STS WI-344...S=32.2 E=1.7"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
</map>
<CENTER>
<IMG WIDTH=529 HEIGHT=122 USEMAP=#img_map BORDER=1 SRC="nph-getgif.cgi?iblast0&207891705325813.gif" ISMAP></CENTER>
<HR>
<PRE>
<PRE>
Score E
Sequences producing significant alignments: (bits) Value
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=01348916&dopt=GenBank">gb|G26684|G26684</a> human STS STS_D11570. >gi|1375195|gb|G2694... <a href = #1348916>517</a> e-146
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=04516686&dopt=GenBank">dbj|AU026763.1|AU026763</a> Rattus norvegicus, OTSUKA clone, OT... <a href = #4516686> 32</a> 1.7
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=06120827&dopt=GenBank">gb|G55508.1|G55508</a> SHGC-100856 Human Homo sapiens STS genom... <a href = #6120827> 32</a> 1.7
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00720683&dopt=GenBank">gb|G03725|G03725</a> human STS WI-344. <a href = #720683> 32</a> 1.7
<PRE>
<a name = 1348916> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=01348916&dopt=GenBank">gb|G26684|G26684</a> human STS STS_D11570. >gi|1375195|gb|G26945|G26945 human STS
SHGC-32699.
Length = 285
Score = 517 bits (261), Expect = e-146
Identities = 285/285 (100%)
Strand = Plus / Plus
Query: 1 gatccctacccttnccgttggtctctntcgctgactcgaggcacctaacatccattcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatccctacccttnccgttggtctctntcgctgactcgaggcacctaacatccattcaca 60
Query: 61 cccaacacaggccagcgacttctggggctcagccacagacatggtttgtnactnttgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccaacacaggccagcgacttctggggctcagccacagacatggtttgtnactnttgagc 120
Query: 121 ttctgttcctagagaatcctagaggcttgattggcccaggctgctgtntgtnctggaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttctgttcctagagaatcctagaggcttgattggcccaggctgctgtntgtnctggaggc 180
Query: 181 aaagaatccctacctcctaggggtgaaaggaaatnaaaatggaaagttcttgtagcgcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaagaatccctacctcctaggggtgaaaggaaatnaaaatggaaagttcttgtagcgcaa 240
Query: 241 ggcctgacatgggtagctgctcaataaatgctagtntgttatttc 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcctgacatgggtagctgctcaataaatgctagtntgttatttc 285
</PRE>
<PRE>
<a name = 4516686> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=04516686&dopt=GenBank">dbj|AU026763.1|AU026763</a> Rattus norvegicus, OTSUKA clone, OT33.16/752f07, microsatellite
sequence, sequence tagged site
Length = 307
Score = 32.2 bits (16), Expect = 1.7
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 221 ggaaagttcttgtagc 236
||||||||||||||||
Sbjct: 32 ggaaagttcttgtagc 47
</PRE>
<PRE>
<a name = 6120827> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=06120827&dopt=GenBank">gb|G55508.1|G55508</a> SHGC-100856 Human Homo sapiens STS genomic, sequence tagged site
Length = 711
Score = 32.2 bits (16), Expect = 1.7
Identities = 18/19 (94%)
Strand = Plus / Plus
Query: 210 gaaatnaaaatggaaagtt 228
||||| |||||||||||||
Sbjct: 588 gaaataaaaatggaaagtt 606
</PRE>
<PRE>
<a name = 720683> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=00720683&dopt=GenBank">gb|G03725|G03725</a> human STS WI-344.
Length = 246
Score = 32.2 bits (16), Expect = 1.7
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 260 ctcaataaatgctagt 275
||||||||||||||||
Sbjct: 178 ctcaataaatgctagt 163
</PRE>
<PRE>
Database: Non-redundant Database of GenBank STS Division
Posted date: Dec 18, 1999 7:45 PM
Number of letters in database: 32,867,852
Number of sequences in database: 89,405
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3932
Number of Sequences: 89405
Number of extensions: 3932
Number of successful extensions: 1177
Number of sequences better than 10.0: 4
length of query: 285
length of database: 32,867,852
effective HSP length: 17
effective length of query: 268
effective length of database: 31,347,967
effective search space: 8401255156
effective search space used: 8401255156
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 10 (19.8 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
</PRE>
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