File: alignret.txt

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########################################
# Program:  alignret
# Rundate:  Wed Jan 16 17:16:13 2002
# Report_file: stdout
########################################
#=======================================
#
# Aligned_sequences: 4
# 1: IXI_234
# 2: IXI_235
# 3: IXI_236
# 4: IXI_237
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 131
# Identity:      95/131 (72.5%)
# Similarity:   127/131 (96.9%)
# Gaps:          25/131 (19.1%)
# Score: 100.0
#
#
#=======================================

IXI_234            1 TSPASIRPPAGPSSRPAMVSSRRTRPSPPGPRRPTGRPCCSAAPRRPQAT     50
IXI_235            1 TSPASIRPPAGPSSR---------RPSPPGPRRPTGRPCCSAAPRRPQAT     41
IXI_236            1 TSPASIRPPAGPSSRPAMVSSR--RPSPPPPRRPPGRPCCSAAPPRPQAT     48
IXI_237            1 TSPASLRPPAGPSSRPAMVSSRR-RPSPPGPRRPT----CSAAPRRPQAT     45
                     |||||:|||||||||:::::::  |||||:||||:::::|||||:|||||

IXI_234           51 GGWKTCSGTCTTSTSTRHRGRSGWSARTTTAACLRASRKSMRAACSRSAG    100
IXI_235           42 GGWKTCSGTCTTSTSTRHRGRSGW----------RASRKSMRAACSRSAG     81
IXI_236           49 GGWKTCSGTCTTSTSTRHRGRSGWSARTTTAACLRASRKSMRAACSR--G     96
IXI_237           46 GGYKTCSGTCTTSTSTRHRGRSGYSARTTTAACLRASRKSMRAACSR--G     93
                     ||:||||||||||||||||||||:::::::::::|||||||||||||  |

IXI_234          101 SRPNRFAPTLMSSCITSTTGPPAWAGDRSHE    131
IXI_235           82 SRPNRFAPTLMSSCITSTTGPPAWAGDRSHE    112
IXI_236           97 SRPPRFAPPLMSSCITSTTGPPPPAGDRSHE    127
IXI_237           94 SRPNRFAPTLMSSCLTSTTGPPAYAGDRSHE    124
                     |||:||||:|||||:|||||||::|||||||


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