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########################################
# Program: needle
# Rundate: Sun 27 Apr 2007 17:20:35
# Commandline: needle
# [-asequence] Spo0F.faa
# [-bsequence] paired_r.faa
# -sformat2 pearson
# Align_format: srspair
# Report_file: ref_rec .needle
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: ref_rec
# 2: gi|94968718|receiver
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 124
# Identity: 32/124 (25.8%)
# Similarity: 64/124 (51.6%)
# Gaps: 17/124 (13.7%)
# Score: 112.0
#
#
#=======================================
ref_rec 1 KILIVDD----QYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDL 46
:|:.|| :.|.|::|.: :.|.....:|.:|.||:.:..:..|.:
gi|94968718|r 1 -VLLADDHALVRRGFRLMLED--DPEIEIVAEAGDGAQAVKLAGELHPRV 47
ref_rec 47 VLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALT 96
|::|..:|||.|::..|:::....:|.|:::|.:.|...::.:.|.||..
gi|94968718|r 48 VVMDCAMPGMSGMDATKQIRTQWPDIAVLMLTMHSEDTWVRLALEAGANG 97
ref_rec 97 HFAK-PFDIDEIRDAV-------- 111
:..| ..|:|.|: ||
gi|94968718|r 98 YILKSAIDLDLIQ-AVRRVANGET 120
#=======================================
#
# Aligned_sequences: 2
# 1: ref_rec
# 2: gi|94968761|receiver
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 119
# Identity: 34/119 (28.6%)
# Similarity: 58/119 (48.7%)
# Gaps: 9/119 ( 7.6%)
# Score: 154.0
#
#
#=======================================
ref_rec 1 KILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLD 50
||||||:......|:..|...|::.....|.::||:|...:..||:|.|
gi|94968761|r 1 -ILIVDDEANTLASLSRAFRLAGHEATVCDNAVRALEIAKSKPFDLILSD 49
ref_rec 51 MKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAK 100
:.:||.||:.:|:.:|.......|::|:....::|..::..||||....|
gi|94968761|r 50 VVMPGRDGLTLLEDLKTAGVQAPVVMMSGQAHIEMAVKATRLGALDFLEK 99
ref_rec 101 PFDIDEIRDAV-------- 111
|...|::...|
gi|94968761|r 100 PLSTDKLLLTVENALKLKR 118
#=======================================
#
# Aligned_sequences: 2
# 1: ref_rec
# 2: gi|94967506|receiver
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity: 29/120 (24.2%)
# Similarity: 53/120 (44.2%)
# Gaps: 9/120 ( 7.5%)
# Score: 121.0
#
#
#=======================================
ref_rec 1 -KILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLL 49
.|::|||..|..:.:..||.:.|:..........|.:.:.....||.::
gi|94967506|r 1 LHIVVVDDDPGTCVYIESVFAELGHTCKSFVRPEAAEEYILTHPVDLAIV 50
ref_rec 50 DMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFA 99
|:.:....|:|:|:|.:|....:..:|:|....|:|...|...||:.:..
gi|94967506|r 51 DVYLGSTTGVEVLRRCRVHRPKLYAVIITGQISLEMAARSIAEGAVDYIQ 100
ref_rec 100 KPFDIDEIRDAV-------- 111
||.|||.:.:..
gi|94967506|r 101 KPIDIDALLNIAERALEHKE 120
#=======================================
#
# Aligned_sequences: 2
# 1: ref_rec
# 2: gi|94970045|receiver
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 118
# Identity: 30/118 (25.4%)
# Similarity: 64/118 (54.2%)
# Gaps: 9/118 ( 7.6%)
# Score: 126.0
#
#
#=======================================
ref_rec 1 KILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTK--ERPDLVL 48
:|:|:|:..:|....:.....||:...|.:|.:||.:.:| ||.|:::
gi|94970045|r 1 -VLLVEDEEALRAAAGDFLETRGYKIMTARDGTEALSMASKFAERIDVLI 49
ref_rec 49 LDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHF 98
.|:.:||:.|..:.:.:..|....:|:.|:.|.: :.:..:.|:.:.:.|
gi|94970045|r 50 TDLVMPGISGRVLAQELVKIHPETKVMYMSGYDD-ETVMVNGEIDSSSAF 98
ref_rec 99 -AKPFDID----EIRDAV 111
.|||.:| :||:.:
gi|94970045|r 99 LRKPFRMDALSAKIREVL 116
#=======================================
#
# Aligned_sequences: 2
# 1: ref_rec
# 2: gi|94970041|receiver
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 125
# Identity: 35/125 (28.0%)
# Similarity: 70/125 (56.0%)
# Gaps: 18/125 (14.4%)
# Score: 156.5
#
#
#=======================================
ref_rec 1 KILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIV--TKERPDLVL 48
.:|:|:|:.|:|.|:..:.:::||...:|.:|.:||:|| :.::.|::|
gi|94970041|r 1 TVLLVEDEEGVRKLVRGILSRQGYHVLEATSGEEALEIVRESTQKIDMLL 50
ref_rec 49 LDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHF 98
.|:.:.||.|.|:.:|:::...:::||.|:.|.:..:::. |.||..
gi|94970041|r 51 SDVVLVGMSGRELSERLRIQMPSLKVIYMSGYTDDAIVRH----GVLTES 96
ref_rec 99 A----KPFDIDEIRDAV-------- 111
| |||..|.:...|
gi|94970041|r 97 AEFLQKPFTSDSLLRKVRAVLQKRQ 121
#---------------------------------------
#---------------------------------------
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