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<!-- ============================================
::DATATOOL:: Generated from "id1.asn"
::DATATOOL:: by application DATATOOL version 1.9.0
::DATATOOL:: on 04/10/2008 16:04:22
============================================ -->
<!-- ============================================ -->
<!-- This section is mapped from module "NCBI-ID1Access"
================================================= -->
<!--
$Revision: 1.12 $
********************************************************************
Network Id server network access
Yaschenko 1996
*********************************************************************
ID1.asn
messages for id server network access
*********************************************************************
-->
<!-- Elements referenced from other modules:
Seq-id FROM NCBI-Seqloc,
Seq-entry FROM NCBI-Seqset,
Seq-hist FROM NCBI-Sequence -->
<!-- ============================================ -->
<!--
**********************************
requests
-->
<!ELEMENT ID1server-request (
ID1server-request_init |
ID1server-request_getgi |
ID1server-request_getsefromgi |
ID1server-request_fini |
ID1server-request_getseqidsfromgi |
ID1server-request_getgihist |
ID1server-request_getgirev |
ID1server-request_getgistate |
ID1server-request_getsewithinfo |
ID1server-request_getblobinfo)>
<!-- DlInit -->
<!ELEMENT ID1server-request_init EMPTY>
<!-- get a gi given a Seq-id -->
<!ELEMENT ID1server-request_getgi (Seq-id)>
<!-- given a gi, get the Seq-entry -->
<!ELEMENT ID1server-request_getsefromgi (ID1server-maxcomplex)>
<!-- DlFini -->
<!ELEMENT ID1server-request_fini EMPTY>
<!--get all Seq-ids of given gi -->
<!ELEMENT ID1server-request_getseqidsfromgi (%INTEGER;)>
<!--get an historical list of gis -->
<!ELEMENT ID1server-request_getgihist (%INTEGER;)>
<!--get a revision history of gi -->
<!ELEMENT ID1server-request_getgirev (%INTEGER;)>
<!--get a state of gi -->
<!ELEMENT ID1server-request_getgistate (%INTEGER;)>
<!-- Complexity stuff will be for ID1 -->
<!ELEMENT ID1server-request_getsewithinfo (ID1server-maxcomplex)>
<!-- Complexity stuff will be for ID1 -->
<!ELEMENT ID1server-request_getblobinfo (ID1server-maxcomplex)>
<!-- Complexity stuff will be for ID1 -->
<!ELEMENT ID1server-maxcomplex (
ID1server-maxcomplex_maxplex,
ID1server-maxcomplex_gi,
ID1server-maxcomplex_ent?,
ID1server-maxcomplex_sat?)>
<!ELEMENT ID1server-maxcomplex_maxplex (Entry-complexities)>
<!ELEMENT ID1server-maxcomplex_gi (%INTEGER;)>
<!-- needed when you want to retrieve a given ent -->
<!ELEMENT ID1server-maxcomplex_ent (%INTEGER;)>
<!-- satellite 0-id,1-dbEST -->
<!ELEMENT ID1server-maxcomplex_sat (#PCDATA)>
<!ELEMENT Entry-complexities (%INTEGER;)>
<!--
entry - the "natural" entry for this (nuc-prot)
bioseq - only the bioseq identified
bioseq-set - any seg-set it may be part of
nuc-prot - any nuc-prot it may be part of
-->
<!ATTLIST Entry-complexities value (
entry |
bioseq |
bioseq-set |
nuc-prot |
pub-set
) #IMPLIED >
<!ELEMENT ID1Seq-hist (
ID1Seq-hist_hist)>
<!ELEMENT ID1Seq-hist_hist (Seq-hist)>
<!ELEMENT ID1server-back (
ID1server-back_init |
ID1server-back_error |
ID1server-back_gotgi |
ID1server-back_gotseqentry |
ID1server-back_gotdeadseqentry |
ID1server-back_fini |
ID1server-back_gistate |
ID1server-back_ids |
ID1server-back_gihist |
ID1server-back_girevhist |
ID1server-back_gotsewithinfo |
ID1server-back_gotblobinfo)>
<!-- DlInit -->
<!ELEMENT ID1server-back_init EMPTY>
<!ELEMENT ID1server-back_error (%INTEGER;)>
<!ELEMENT ID1server-back_gotgi (%INTEGER;)>
<!-- live -->
<!ELEMENT ID1server-back_gotseqentry (Seq-entry)>
<!-- dead -->
<!ELEMENT ID1server-back_gotdeadseqentry (Seq-entry)>
<!-- DlFini -->
<!ELEMENT ID1server-back_fini EMPTY>
<!ELEMENT ID1server-back_gistate (%INTEGER;)>
<!ELEMENT ID1server-back_ids (Seq-id*)>
<!--
because hand crafted Seq-hist does not follow
same conventions
-->
<!ELEMENT ID1server-back_gihist (ID1Seq-hist*)>
<!ELEMENT ID1server-back_girevhist (ID1Seq-hist*)>
<!ELEMENT ID1server-back_gotsewithinfo (ID1SeqEntry-info)>
<!ELEMENT ID1server-back_gotblobinfo (ID1blob-info)>
<!ELEMENT ID1server-debug (ID1server-back*)>
<!ELEMENT ID1blob-info (
ID1blob-info_gi,
ID1blob-info_sat,
ID1blob-info_sat-key,
ID1blob-info_satname,
ID1blob-info_suppress,
ID1blob-info_withdrawn,
ID1blob-info_confidential,
ID1blob-info_blob-state,
ID1blob-info_comment?,
ID1blob-info_extfeatmask?)>
<!ELEMENT ID1blob-info_gi (%INTEGER;)>
<!ELEMENT ID1blob-info_sat (%INTEGER;)>
<!ELEMENT ID1blob-info_sat-key (%INTEGER;)>
<!ELEMENT ID1blob-info_satname (#PCDATA)>
<!ELEMENT ID1blob-info_suppress (%INTEGER;)>
<!ELEMENT ID1blob-info_withdrawn (%INTEGER;)>
<!ELEMENT ID1blob-info_confidential (%INTEGER;)>
<!--
blob-state now contains blob version info.
it's actually minutes from 01/01/1970
and it's negative if blob is dead.
-->
<!ELEMENT ID1blob-info_blob-state (%INTEGER;)>
<!-- public comment for withdrawn record -->
<!ELEMENT ID1blob-info_comment (#PCDATA)>
<!-- mask for external features (SNP,...) -->
<!ELEMENT ID1blob-info_extfeatmask (%INTEGER;)>
<!ELEMENT ID1SeqEntry-info (
ID1SeqEntry-info_blob-info,
ID1SeqEntry-info_blob?)>
<!ELEMENT ID1SeqEntry-info_blob-info (ID1blob-info)>
<!ELEMENT ID1SeqEntry-info_blob (Seq-entry)>
|
