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<!-- ============================================
::DATATOOL:: Generated from "seqset.asn"
::DATATOOL:: by application DATATOOL version 2.3.1
::DATATOOL:: on 05/02/2011 23:05:01
============================================ -->
<!-- ============================================ -->
<!-- This section is mapped from module "NCBI-Seqset"
================================================= -->
<!--
$Revision: 279709 $
**********************************************************************
NCBI Sequence Collections
by James Ostell, 1990
Version 3.0 - 1994
**********************************************************************
-->
<!-- Elements used by other modules:
Bioseq-set,
Seq-entry -->
<!-- Elements referenced from other modules:
Bioseq,
Seq-annot,
Seq-descr FROM NCBI-Sequence,
Object-id,
Dbtag,
Date FROM NCBI-General -->
<!-- ============================================ -->
<!--
*** Sequence Collections ********************************
*
just a collection
-->
<!ELEMENT Bioseq-set (
Bioseq-set_id?,
Bioseq-set_coll?,
Bioseq-set_level?,
Bioseq-set_class?,
Bioseq-set_release?,
Bioseq-set_date?,
Bioseq-set_descr?,
Bioseq-set_seq-set,
Bioseq-set_annot?)>
<!ELEMENT Bioseq-set_id (Object-id)>
<!-- to identify a collection -->
<!ELEMENT Bioseq-set_coll (Dbtag)>
<!-- nesting level -->
<!ELEMENT Bioseq-set_level (%INTEGER;)>
<!ELEMENT Bioseq-set_class %ENUM;>
<!--
nuc-prot - nuc acid and coded proteins
segset - segmented sequence + parts
conset - constructed sequence + parts
parts - parts for 2 or 3
gibb - geninfo backbone
gi - geninfo
genbank - converted genbank
pir - converted pir
pub-set - all the seqs from a single publication
equiv - a set of equivalent maps or seqs
swissprot - converted SWISSPROT
pdb-entry - a complete PDB entry
mut-set - set of mutations
pop-set - population study
phy-set - phylogenetic study
eco-set - ecological sample study
gen-prod-set - genomic products, chrom+mRNA+protein
wgs-set - whole genome shotgun project
named-annot - named annotation set
named-annot-prod - with instantiated mRNA+protein
read-set - set from a single read
paired-end-reads - paired sequences within a read-set
small-genome-set - viral segments or mitochondrial minicircles
-->
<!ATTLIST Bioseq-set_class value (
not-set |
nuc-prot |
segset |
conset |
parts |
gibb |
gi |
genbank |
pir |
pub-set |
equiv |
swissprot |
pdb-entry |
mut-set |
pop-set |
phy-set |
eco-set |
gen-prod-set |
wgs-set |
named-annot |
named-annot-prod |
read-set |
paired-end-reads |
small-genome-set |
other
) #REQUIRED >
<!ELEMENT Bioseq-set_release (#PCDATA)>
<!ELEMENT Bioseq-set_date (Date)>
<!ELEMENT Bioseq-set_descr (Seq-descr)>
<!ELEMENT Bioseq-set_seq-set (Seq-entry*)>
<!ELEMENT Bioseq-set_annot (Seq-annot*)>
<!ELEMENT Seq-entry (
Seq-entry_seq |
Seq-entry_set)>
<!ELEMENT Seq-entry_seq (Bioseq)>
<!--
*** Sequence Collections ********************************
*
just a collection
-->
<!ELEMENT Seq-entry_set (Bioseq-set)>
|
