<!--
# $Id: pmc-1.dtd,v 1.136 2004/12/08 23:38:35 merker Exp $
-->
<!-- PMC DTD Version History:

   2000-08-09
           Initial Draft. This is derived from the Keton Full Text DTD, which itself is based on the CJS 2.1 DTD.

All changes since August 2000 are documented in pmc-1-dtdnotes.txt in this directory.

-->
<!--    Public document type definition. Typical invocation:
<!DOCTYPE art PUBLIC "-//PMC//DTD FULL LENGTH ARTICLE//EN" []>
-->

<!-- Character Entities  -->
<!ENTITY % PMCEntities SYSTEM	"pmc.ent">
<!ENTITY % ISO8879ent SYSTEM	"iso-8879-1986.ent">
<!ENTITY % ISO9573ent SYSTEM	"iso-9573-13-1991.ent">

%PMCEntities; %ISO8879ent; %ISO9573ent;

<!-- Internal Entities  -->
<!ENTITY % data "#PCDATA|entitygrp|b|it|sc|ul|sup|sub|email|fnr|exlnk|break|mml:math">

<!ENTITY % id-att
	"id	     ID         #IMPLIED">

<!ENTITY % id-att-required
	"id	     ID         #IMPLIED">

<!ENTITY % figr-atts
	"fid 		IDREF 		#REQUIRED
	 to  		IDREF 		#IMPLIED">

<!ENTITY % tblr-atts
	"tid 		IDREF 		#REQUIRED
	 to  		IDREF 		#IMPLIED">

<!ENTITY % abbr-atts
	"bid 		IDREF 		#REQUIRED
	 to  		IDREF 		#IMPLIED">

<!ENTITY % rid-atts
	"rid     IDREF       #REQUIRED">

<!ENTITY % fnr-atts
	"rid     IDREF       #REQUIRED
	 to      IDREF       #IMPLIED">
	 
<!ENTITY % insr-atts
	"iid     IDREF       #IMPLIED">

<!ENTITY %	supplr-atts
	"sid     CDATA       #REQUIRED
	 to      CDATA       #IMPLIED">

<!ENTITY %	secr-atts
	"sid     IDREF       #REQUIRED">


<!-- Associated DTD for Supplemental Data files: Supplemental data information can
be included in the xml file (see the element "suppl"). Files created to this DTD are 
used for the display of supplemental data on the PMC site -->
<!ENTITY % supp_data_dtd SYSTEM "sdata.dtd">
%supp_data_dtd;




<!-- **************** Article level elements **************** -->
<!ELEMENT art (ui*, ji, fm, bdy?, bm?, response*, sdata?)>
<!ATTLIST art
	type (commentary | correction | editorial | letter | obituary | 
	      product_review | retraction | reply | review_art | 
			series | admin | advert | cover | toc | index | filler |
			poster) #IMPLIED
	language (eng|spa|fre|ger|rus|jpn|ita) #IMPLIED>
	
<!-- type attribute not needed for regular articles -->

<!-- language attribute	
	language attribute not needed for articles in English
	eng	English
	spa	Spanish
	fre	French
	ger	German
	rus	Russian
	jpn	Japanese
	ita	Italian -->
	
	
	

<!-- Unique Identifier: Optional element, used by rendering code for generating links -->
<!ELEMENT ui (#PCDATA)>
<!ATTLIST ui
	type (aid | artnum | doi | pmid | pmc | pii | other) #IMPLIED >
<!-- ui types
	aid	    - article id (publisher's id)
	artnum   - article number (publisher's number)
	doi	   - digital object identifier (see www.doi.org)
	pmid   - pubmed id (see www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed)
	pmc - pubmed central id
	-->

<!-- Journal Identifier: Required element, used for identification of journal domain. 
This is generally a short abbreviation of the journal title -->
<!ELEMENT ji (#PCDATA)>

<!-- Front matter -->
<!ELEMENT fm (doctopic*, dochead?, docsubj*, supptitle?, sertitle*, sertext?, addart?, bibl, 
product*, suppmat?, history?, com?, con?, cor*, cpyrt?, relart*, shortabs?, abs?, kwdg?)>

<!-- Body -->
<!ELEMENT bdy (p*, (sec|fig|tbl)*)>

<!-- Back matter -->
<!ELEMENT bm ( (ack?, glossary?, notes*, (appm |refgrp)*, fn*) | sec) > 

<!-- Response to the Article -->
<!ELEMENT response (fm?, bdy?, bm?)>
<!ATTLIST response
	%id-att; >




<!-- **************** Front Matter elements **************** -->
<!-- Document topic -->
<!ELEMENT doctopic (%data;)*>

<!-- Document heading or type -->
<!ELEMENT dochead (%data;)*>

<!-- Document subject -->
<!ELEMENT docsubj (%data;)*>

<!-- Supplement title -->
<!ELEMENT supptitle (%data;)*>

<!-- Series title -->
<!ELEMENT sertitle (%data;)*>

<!-- Series text - descriptitve text for a series of articles -->
<!ELEMENT sertext (p*) >

<!-- Addendum and/or correction information: This element is used in Erratum articles
to identify the article that is being corrected -->
<!ELEMENT addart EMPTY>
<!ATTLIST addart
	vol CDATA #IMPLIED
	pg CDATA #REQUIRED
	date CDATA #IMPLIED
	ui CDATA #IMPLIED
	pmid CDATA #IMPLIED>
	
	
<!-- *************Bibliographic Information *******************-->
<!--(the "bibl" element is shared between front matter and 
references). Attributes to "bibl" are only used in the bibliography
(B1, B2, etc.). They are not needed in the article (frontmatter) 
information -->
<!ELEMENT bibl (title?, edg?, (aug | insg)*, firstauaff?, ang?, source?, issn?, publisher?, 
pubdate?, volume?, edition?, issue?, fpage?, lpage?, range?, stringrange?, exlnk?, inpress?, p*, xrefbib?)>
<!ATTLIST bibl
	%id-att;
	no CDATA #IMPLIED >

<!-- Title -->
<!ELEMENT title (p, subtitle?)>
<!ELEMENT subtitle (p)>

<!-- ****** Author and Editor Group ******* -->
<!-- Editor Group -->
<!ELEMENT edg ((collab | au | etal)*, ins?)>
<!ATTLIST edg
	type CDATA #IMPLIED>
	
<!-- ******Author Group****** -->
<!ELEMENT aug (collab | au | etal)*>

<!-- Author Elements -->
<!ELEMENT au (snm, (mi |mnm)?, fnm?, suf?, degree*, roles*, (insr | anr)*, email*, aucomment?)>
<!ATTLIST au
	%id-att;
	ca (no | yes) #IMPLIED
	ce (no | yes) #IMPLIED
	da (no | yes) #IMPLIED
>
<!-- ca=Corresponding Author (set to 'yes' if they are)
	  ce=Contributed equally (set to 'yes' if they did)
	  da=deceased author
 -->


<!-- Collaborative author: used for groups of authors credited under one name -->
<!ELEMENT collab (#PCDATA | insr | anr | email | entitygrp | it | sc | sup | sub | b | break | exlnk)*>
<!ATTLIST collab
	type	(on_behalf) #IMPLIED
>
<!-- use type=on_behalf when a group is not the author, but individual authors
      are writing "on behalf" of an organization-->
<!-- Surname -->	
<!ELEMENT snm (%data;)*>

<!-- Middle Initial(s) -->
<!ELEMENT mi (%data;)*>

<!-- Middle Name -->
<!ELEMENT mnm (%data;)*>

<!-- First Name -->
<!ELEMENT fnm (%data;)*>

<!-- Suffix (ie, Jr. III, 3rd) -->
<!ELEMENT suf (#PCDATA | sup)*>

<!-- Degree(s) -->
<!ELEMENT degree (%data;)*>

<!-- Roles (author's role/title) -->
<!ELEMENT roles (%data;)*>

<!-- Email address -->
<!ELEMENT email (%data;)*>

<!-- ET AL -->
<!ELEMENT etal EMPTY>

<!-- Author Comment: used for extra text associated with an author -->
<!ELEMENT aucomment (#PCDATA | insr | anr | it | b | sc | sup | sub)* >


<!-- ******* Institutions *************-->
<!-- Institution Group -->
<!ELEMENT insg (ins+)>

<!-- Institution -->
<!ELEMENT ins (p)>
<!ATTLIST ins
	%id-att;>

<!-- First Author's Affiliation (used for PubMed affiliation) -->
<!ELEMENT firstauaff (%data;)*>

<!-- Author Notes: Footnotes to authors are collected in the Author note group -->
<!ELEMENT ang (fn+)>

<!-- Source: Journal or Book title -->
<!ELEMENT source (#PCDATA | b | it | sc | sup | sub | ms | entitygrp | exlnk)*>

<!-- ISSN -->
<!ELEMENT issn (%data;)*>

<!-- Publisher -->
<!ELEMENT publisher (name?, location?)>
<!ELEMENT name (%data;)*>
<!ELEMENT location (%data;)*>

<!-- Publication date (year): this is the publication date of the issue. Can be any string
 (ie "January, 2001" "Fall 2001" "March 11, 2001"  -->
<!ELEMENT pubdate (#PCDATA)>

<!-- Volume -->
<!ELEMENT volume (%data;)*>

<!-- Edition -->
<!ELEMENT edition (%data;)*>

<!-- Issue -->
<!ELEMENT issue (#PCDATA)>

<!-- First page -->
<!ELEMENT fpage (#PCDATA)>
<!ATTLIST fpage
		seq CDATA #IMPLIED >
<!-- seq attribute used for sequence number or letter for continuous makeup journals with
more than one article starting on the same page -->

<!-- Last page -->
<!ELEMENT lpage (#PCDATA)>

<!-- Page range: Specifies non-continuous page ranges -->
<!-- PAGE RANGE -->
<!ELEMENT range        (subrange+) >
<!ELEMENT subrange     EMPTY       >
<!ATTLIST subrange
	begin		CDATA		#IMPLIED
	end		CDATA		#IMPLIED
	single	CDATA		#IMPLIED
	>

<!-- String range: Page range as a string -->
<!ELEMENT stringrange	(#PCDATA)>

<!-- In press: used only in the refgrp, not in the fm -->
<!ELEMENT inpress EMPTY>

<!-- Bibliographic Links -->
<!ELEMENT xrefbib ((pubidlist | pubid), pubid*)>
<!-- PubId group. You can use an identifier, or a list of alternate ids 
for the same article. This is taken from the NCBI publisher.dtd -->
<!ELEMENT pubidlist (pubid+)>
<!ELEMENT pubid (#PCDATA)>
<!ATTLIST pubid
	idtype (pubmed | medline | doi | pii | pmcid | pmcpid | pmpid) #REQUIRED>


<!-- product is used to supply information about products (books, software, hardware, 
    etc. being reviewed--> 
<!ELEMENT product (%data;|bibl)*>
<!ATTLIST product
	product-type CDATA	#IMPLIED>
<!-- product-types can be: book, software, hardware, website -->

<!-- suppmat is the publisher-supplied toc link for supplemental material to an article--> 
<!ELEMENT suppmat (%data;)*>


<!-- Document History -->
<!ELEMENT history (rec | revreq | revrec | acc | pub | epub)*>

<!-- Date received -->
<!ELEMENT rec (date)>

<!-- Date revisions requested -->
<!ELEMENT revreq (date)>

<!-- Date revisions received -->
<!ELEMENT revrec (date)>

<!-- Date accepted -->
<!ELEMENT acc (date)>

<!-- Date published: This is the article/issue publication date -->
<!ELEMENT pub (date)>

<!-- Date electronic version of the article was published -->
<!ELEMENT epub (date)>


<!-- Date (day / month / year) -->
<!-- These should ALWAYS be numeric values!!!! -->
<!ELEMENT date (day?, month?, year)>
<!ELEMENT day (#PCDATA)>
<!ELEMENT month (#PCDATA)>
<!ELEMENT year (#PCDATA)>


<!-- Communicated by and Contributed by Information -->
<!-- Communicated by -->
<!ELEMENT com (%data;)*>

<!-- Contributed by -->
<!ELEMENT con (%data;)*>

<!-- Correspondence information -->
<!ELEMENT cor (%data;)*>


<!-- Copyright Information -->
<!ELEMENT cpyrt (#PCDATA | date | cpyrtnme | cpyrtclr | exlnk | it)*>

<!-- Copyright holder's name -->
<!ELEMENT cpyrtnme (collab | au)+>

<!-- Copyright clearance organization -->
<!ELEMENT cpyrtclr (collab | au)+>


<!-- frontmatter text links to related articles -->
<!ELEMENT relart (p | (linktype, ui?, title?, aug*, volume, issue?, fpage, lpage?, pub?))>
<!ATTLIST relart
	type CDATA #IMPLIED>

<!ELEMENT linktype (#PCDATA)>
	
	
<!-- Short abstract -->
<!ELEMENT shortabs (sec+)>


<!-- Keywords -->
<!ELEMENT kwdg (kwd+)>
<!ELEMENT kwd (#PCDATA | b | it | sc | sup | sub | entitygrp)*>


<!-- Abstract -->
<!ELEMENT abs (sec+)>


<!-- ************** Section Elements ********************-->
<!-- Section -->
<!-- Note: Tables and figures do NOT occur inside paragraph tags!! -->
<!ELEMENT sec (st?, (p | sec | tbl | fig | suppl | fn | graphic | refgrp)*)>
<!ATTLIST sec
		type      CDATA      #IMPLIED
	   displevel CDATA      #IMPLIED
	   %id-att;>
<!-- Note: Level 1 heads may be assigned a type attribute if they are 
of a certain content type (for indexing purposes). A section that contains 
content of more than one type will have the type IDs combined. 
(ie, "Materials and Methods" would be type="3|4") -->
<!-- 
             type ID	        content type
     
		1		Introduction/Synopsis
		3		Materials
		4		Methods/Procedures
		5		Patients/Participants/Subjects
		6		Cases/Case Reports
		7		Results/Statement of Findings
		8		Discussion/Interpretation
		9		Conclusions/Comment
		10		Appendix
		11		Acknowledgments
		12		Footnotes/Author Footnotes
		13		References
-->
<!-- Content in Appendix [<bm><appm><app>], Abstract [<fm>(<abs>|<shortabs>)], 
Acknowledgments [<bm><ack>], Footnotes [<bm><fn>] or Author Footnotes 
[<fm><bibl><ang><an>], and References [<bm><refgrp>] can be recognized by its 
identifying element if it is to be indexed. It does not need to be tagged with 
a type attribute. -->

<!-- Section Title -->
<!ELEMENT st (p)>

<!-- Paragraph -->
<!ELEMENT p (#PCDATA | it | b | aff | abbr | fnr | ms | tblr | arrayr | hr | tblfnr | 
figr | appr | supplr | fdr | sc | ul | sub | sup | boxtext | qd | l | f | fd | 
deflist | math | exlnk | email | graphic | entitygrp | font | secr | bibl | 
break | array | refgrp)*>

<!-- Superscript -->
<!ELEMENT sup (#PCDATA | b | it | sc | ul | sup | sub | tblfnr | figr | tblr | arrayr | 
entitygrp | math | ms | exlnk | graphic | f | font)*>

<!-- Subscript -->
<!ELEMENT sub (#PCDATA | b | it | sc | ul | sup | sub | tblfnr | figr | tblr | arrayr | 
entitygrp | math | ms | exlnk | graphic | f | font)*>

<!-- Boldface -->
<!ELEMENT b (#PCDATA | sup | sub | it | ul | sc | abbr | tblfnr | figr | tblr | arrayr | fnr |
entitygrp | exlnk | fdr | ms| break | graphic | font | email | hr | math)*>

<!-- Italic -->
<!ELEMENT it (#PCDATA | sup | sub | b | ul | sc | abbr | tblfnr | figr | tblr | arrayr | fnr |
entitygrp | appr | exlnk | fdr | ms | math| break | graphic | font | email)*>

<!-- Small Cap -->
<!ELEMENT sc (#PCDATA | sup | sub | b | it | ul | tblfnr | figr | tblr | arrayr | 
entitygrp | exlnk | fdr | ms| break | graphic | font)*>

<!-- Monospace text (typewriter text) -->
<!ELEMENT ms (#PCDATA | sup | sub | b | it | ul | sc | tblfnr | figr | 
tblr | arrayr | entitygrp | exlnk | fdr | font | break | math | graphic)*>

<!-- Underline -->
<!ELEMENT ul (#PCDATA | ul | sup | sub | b | it | sc | tblfnr | figr | 
tblr | arrayr | entitygrp | exlnk | fdr | math | ms| break | graphic | font)*>
<!ATTLIST ul 
		style CDATA #IMPLIED>


<!-- Affiliation -->
<!ELEMENT aff (%data;)*>
<!ATTLIST aff
	%id-att;>


<!-- Grouped (combined) entities: used for indicating that two entities should
be combined for one character -->
<!ELEMENT entitygrp (#PCDATA)>

<!-- Boxtext -->
<!ELEMENT boxtext (st?, p*, sec*)>
<!ATTLIST boxtext
	style CDATA #IMPLIED
	color CDATA #IMPLIED>

<!-- Font - font should be use only to modify text for purposes of distinguishing 
data and not for stylistic or display purposes -->
<!ELEMENT font (%data;)* >
<!ATTLIST font
		color CDATA #IMPLIED
		style CDATA #IMPLIED
		face  CDATA #IMPLIED>

<!-- Displayed Quotes -->
<!ELEMENT qd (p+)>

<!-- List -->
<!ELEMENT l (li+)>
<!ATTLIST l
	type CDATA #IMPLIED>
<!-- LIST TYPES 
	1 - ordered (numbered) list
	2 - unordered (bulleted) list
	3 - ordered (alpha - lowercase) list
	4 - ordered (alpha - uppercase) list
	5 - ordered (roman - lowercase) list
	6 - ordered (roman - uppercase) list
	7 - unlabeled (neither numbers nor bullets)
-->

<!-- list item -->
<!ELEMENT li (p | tbl | fig)*>
<!ATTLIST li
	id CDATA #IMPLIED>
	
<!-- *********** Math Elements ************  -->
	
<!-- Inline Formula -->
<!ELEMENT f (#PCDATA | graphic | math | entitygrp)*>

<!-- Displayed Formula -->
<!ELEMENT fd (#PCDATA | graphic | math | entitygrp)*>
<!ATTLIST fd
	id	 CDATA  #IMPLIED
	sid CDATA #IMPLIED
	align CDATA #IMPLIED>
	
<!-- Math Equation 
Moved NOTATION for Tex to sdata.dtd

<!NOTATION tex PUBLIC
              "+//ISBN 0-201-13448-9::Knuth//NOTATION The TeXbook//EN">
<!NOTATION TEX PUBLIC
              "+//ISBN 0-201-13448-9::Knuth//NOTATION The TeXbook//EN">-->
<!ELEMENT math (%data;)*>
<!ATTLIST math
	mathtype NOTATION (tex|mathml) #IMPLIED
	id CDATA #IMPLIED>

<!NOTATION mathml PUBLIC
              "-//W3C//DTD MathML 2.0//EN">



<!-- ****************** Backmatter Elements ******************** -->
<!-- Acknowledgements -->
<!ELEMENT ack (sec+)>

<!-- Glossary  Elements -->
<!-- Glossary -->
<!ELEMENT glossary (st?, deflist)>

<!-- Definition list -->
<!ELEMENT deflist ((term, dd)+)>

<!-- Term -->
<!ELEMENT term (p)>
<!ATTLIST term
	%id-att;>
	
<!-- Definition -->
<!ELEMENT dd (p+)>
<!ATTLIST dd
	id CDATA #IMPLIED>
	
<!-- Notes at End of Article: Could be "Note in Proof" -->
<!ELEMENT notes (p*, sec*)>

<!-- ***************** Appendix Elements ***************** -->
<!-- Appendix Matter -->
<!ELEMENT appm (st?, p*, app+)>

<!-- Appendix -->
<!ELEMENT app (st?, p*, sec*)>
<!ATTLIST app
	%id-att;>
	
<!-- Reference Group -->
<!ELEMENT refgrp (st?, p?, bibl+)>


<!-- Footnote -->
<!ELEMENT fn (p+)>
<!ATTLIST fn
	%id-att;>


<!-- ************ Figure and Table Elements ***************** -->

<!-- Table -->
<!ELEMENT tbl (title?, caption?, (tblbdy | graphic)*, tblfn*)>
<!ATTLIST tbl
	%id-att-required;>
<!-- id of table should begin with "T" (T1, TIV, T43) -->

<!-- Array - an array is tabular material displayed inline -->
<!ELEMENT array (title?, caption?, (tblbdy | graphic)*, tblfn*) >
<!ATTLIST array
	%id-att;>





<!-- Table Body -->
<!ELEMENT tblbdy (r+)>
<!ATTLIST tblbdy
	ra CDATA #IMPLIED
	ca (left | center | middle |  right) #IMPLIED
	cols CDATA #REQUIRED>
<!-- attributes: ra, row alignment; ca, cell/column alignment; cols, no of columns -->
	
<!-- Table rows -->
<!ELEMENT r (c*)>
<!ATTLIST r
	ra (top | center | middle | bottom) #IMPLIED >
	
<!-- Table cells -->
<!--
     hr - outputs a line!!
     cspan - number of columns to span
     rspan - number of rows to span
     indent - specifies an indent level (currently only supports '1')
     ca - column alignment
-->
<!ELEMENT c (hr | p*)>
<!ATTLIST c
	cspan CDATA #IMPLIED
	rspan CDATA #IMPLIED
	indent CDATA #IMPLIED
	ca (left | center | right | decimal) #IMPLIED >
	
<!ELEMENT hr EMPTY>

<!-- line break -->
<!ELEMENT break EMPTY> 

<!-- Table Footnote -->
<!ELEMENT tblfn (p+)>
<!ATTLIST tblfn
	%id-att; >
	
	
<!-- Caption (figure / table) -->
<!--
     Descriptive title for figure / table
     - for figures, this should be the first sentence of the caption / text.
     (this is used when rendering thumbnails ;-)
-->
<!ELEMENT caption (p+)>

	
<!-- Figure -->
<!ELEMENT fig (title?, caption?, text?, (graphic | media)*)>
<!ATTLIST fig
	%id-att-required; >
<!-- id of figure should begin with "F" (F1, F2, FIII) -->
	
<!-- Main text / caption for the figure: this includes the first sentence
that was pulled out for the "caption" element -->
<!ELEMENT text (p+)>

<!ELEMENT graphic EMPTY>
<!-- NOTE: Inside a fig tag, do NOT include the extension, outside a fig 
tag (inline image) include the extension -->
<!ATTLIST graphic
	file CDATA #REQUIRED
	%id-att; 
	hint.layout (single | double | landscape) #IMPLIED
	hint.detail CDATA #IMPLIED >
	
<!ELEMENT media (graphic?)>
<!ATTLIST media
	file CDATA #REQUIRED
	mime-subtype CDATA #IMPLIED >
	
	
<!-- Supplementary Material -->
<!ELEMENT suppl (anchor*, ((title?, caption?, text?, file*) | exlnk))>
<!ATTLIST suppl
	%id-att; >
	
<!ELEMENT anchor (%data;)*>
<!ATTLIST anchor
	type (fig | tab | toc) #REQUIRED
	id CDATA #IMPLIED
	part CDATA #IMPLIED >	
<!-- ID for the supplementary material, ie. SD1, SD2, SD3 -->

<!ELEMENT file (sec | p)*>
<!ATTLIST file
	name CDATA #IMPLIED
	filetype CDATA #IMPLIED
 >

<!--
	filetype NOTATION (asf | au | avi | csv | cyto | exe | fas | gz | hqz | hlp | idl | bmp | dat | doc | gif | html | 
	jar | jpeg | jpg | map | mdb | midi | mm | mov | mp3 | mpeg | p01 | pdf | pl | pop | ppt | ps | qtx | raw | ra | rm | rtf | 
	rv | sgml | swf | tar | tex | tiff | txt | wav | wpd | xls | zip |
	
ASF | AU | AVI | CSV | CYTO | EXE | FAS | GZ | HQZ | HLP | IDL | BMP | DAT | DOC | GIF | HTML | 
	JAR | JPEG | JPG | MAP | MDB | MIDI | MM | MOV | MP3 | MPEG | P01 | PDF | PL | POP | PPT | PS | QTX | RAW | RA | RM | RTF | 
	RV | SGML | SWF | TAR | TEX | TIFF | TXT | WAV | WPD | XLS | ZIP 	
	
	) #IMPLIED
-->
	
<!-- External links -->
<!ELEMENT exlnk (%data;)*>
<!-- ext. link (Medline, Genbank) -->
<!ATTLIST exlnk
	access CDATA #IMPLIED
	type (article | company | doi | ec |emblalign| ftp | gen | genpept | geo | highwire | 
	medline | pdb | pgr | pir | pmc | url | pirdb | sprot) #REQUIRED 
	linktype CDATA #IMPLIED 
	vol CDATA #IMPLIED
	pg CDATA #IMPLIED 
	valid_as_of  CDATA  #IMPLIED	>
	
<!-- linktype attributes 
	correction		used in an article to link to its associated correction
	retraction		used in an article to link to its associated retraction
	commentary		used in an article to link to its associated commentary	
	companion		used in an article to link to a companion (sibling) article
	corrected.art	used in a correction to link to the article being corrected
	retracted.art	used in a retraction to link to the article being retracted
	comp2comment	used in a commentary to link to the article being commented upon
	articleref		used to link to an article mentioned in text. no back link
	-->
	
	
<!-- EXLNK TYPES
	article       link to a related article
	company   supplier link
	ec             enzyme nomenclature - see http://www.chem.qmw.ac.uk/iubmb/enzyme/
	ftp            file transfer protocol
	gen           GenBank
	genpept
	geo			Gene Expression Omnibus
	highwire   highwire press intrajournal link
	medline	    medline or pubmed id
	pdb          protein data bank - see http://www.rcsb.org/pdb/
	pgr		plant gene register  - see http://www.tarweed.com/pgr/
	pir		Protein Information Resource - see http://pir.georgetown.edu
	pirdb		Protein Information Resource - see http://pir.georgetown.edu
	pmc		used to link between articles in PubMedCentral access is PMID
	sprot		Swiss-Prot - see http://www.ebi.ac.uk/swissprot/
	url	            website
	
-->



<!-- ***************** Intra-article References ************************-->

<!-- Figure Reference -->
<!-- Text contained between open and close tags is linked -->
<!-- Specify the number of the figure
     ie. Fig <figr fid="F1">1</figr>
     NOT Fig <figr fid="F1"> -->
<!ELEMENT figr (#PCDATA | it | b | sup| sub)*>
<!ATTLIST figr
		%figr-atts;>

<!-- Table reference -->
<!-- Text contained between open and close tags is linked -->
<!-- Specify the number of the table
     ie. Table <tblr tid="T1">1</tblr>
     NOT Table <tblr tid="T1"> -->
<!ELEMENT tblr (#PCDATA | it )*>
<!ATTLIST tblr
		%tblr-atts;>

<!-- Array reference -->
<!-- Text contained between open and close tags is linked -->
<!-- Specify the number of the table
     ie. Table <tblr tid="T1">1</tblr>
     NOT Table <tblr tid="T1"> -->
<!ELEMENT arrayr (#PCDATA | it )*>
<!ATTLIST arrayr
		%tblr-atts;>

<!-- Bibliographic reference -->
<!-- Text contained between open and close tags is linked -->
<!-- Always explicitly put links for each reference, do NOT use ranges
     ie. [<abbr bid="B1">1</abbr>,<abbr bid="B2">2</abbr>,<abbr bid="B3">3</abbr>]
     NOT [<abbr bid="B1">1</abbr>-<abbr bid="B3">3</abbr>] -->
<!ELEMENT abbr (#PCDATA | sup | sub | it | sc | b | entitygrp | ul)*>
<!ATTLIST abbr
		%abbr-atts;>

<!-- Author Note Reference -->
<!-- Text contained between open and close tags is linked -->
<!ELEMENT anr (#PCDATA)>
<!ATTLIST anr
		%rid-atts; >
	
<!-- For rid, use "FN" followed by a value
from the FOOTNOTE/AFFILIATION SYMBOLS table below -->

<!-- Instition Reference (author affiliation) -->
<!ELEMENT insr (#PCDATA)>
<!ATTLIST insr
		%insr-atts; >

<!-- iid is used to identify author/institution affiliations
For institution references, use "O" (cap oh) followed by a value
from the FOOTNOTE/AFFILIATION SYMBOLS table below -->

<!-- Footnote Reference -->
<!-- Text contained between open and close tags is linked -->
<!ELEMENT fnr (#PCDATA)>
<!ATTLIST fnr
		%fnr-atts; >

<!-- For rid, use "FN" followed by a value
from the FOOTNOTE/AFFILIATION SYMBOLS table below -->

<!-- Displayed Formula Reference -->
<!-- Text contained between open and close tags is linked -->
<!ELEMENT fdr (#PCDATA)>
<!ATTLIST fdr
	 rid     CDATA       #REQUIRED
	 to      CDATA       #IMPLIED>


<!-- Supplementary Material Reference -->
<!-- Text contained between open and close tags is linked -->
<!ELEMENT supplr (#PCDATA | it)*>
<!ATTLIST supplr
		%supplr-atts; >

<!-- Table Footnote Reference -->
<!ELEMENT tblfnr (#PCDATA)>
<!ATTLIST tblfnr
		%rid-atts; >
	
<!-- Section Reference -->
<!ELEMENT secr (#PCDATA)>
<!ATTLIST secr
		%secr-atts;>
	
<!-- Appendix Reference -->
<!ELEMENT appr (%data;)*>
<!ATTLIST appr
		%rid-atts; >




<!-- VALUES OF FOOTNOTE/AFFILIATION SYMBOLS

a-z (ie FNa)  - superior letter
1-9 (ie FN1)  - superior number

Following is a list of symbols. The ID should be the prefix
followed by "x" and a two-digit number (FNx01).
x01 - asterisk
x02 - single dagger
x03 - double dagger
x04 - section mark
x05 - pgraph mark
x06 - double vertical (parallel)
x07 - superior #
x08 - two asterisks
x09 - two single daggers
x10 - two section marks
x11 - two pgraph marks
x12 - two double daggers
x14 - two double vertical (parallel)
x15 - superior @
x16 - double pound sign
x17 - double @ sign
x18 - three asterisks
x19 - three plus signs
x20 - three double daggers
x21 - three section marks
x22 - three double vertical
x23 - three pgraph marks
x24 - three pound signs
x25 - three @ signs
x26 - three single daggers
-->



<!-- ============================================================= -->
<!--                    MATH: MATHML MODULES                       -->
<!-- ============================================================= -->


<!--                    MATHML SETUP MODULE                        -->
<!--                    Called from the DTD to include the MathML
                        elements in the tag set.                   -->
<!ENTITY % mathmlsetup.ent 
                        PUBLIC
"-//NLM//DTD Archiving and Interchange DTD Suite MathML Setup Module v1.1 20031101//EN"
"pmc1-mathml/mathmlsetup.ent"                                             >

<!--                    MATHML SETUP MODULE                        -->
<!--                    Invoke the MathML modules                  -->
%mathmlsetup.ent;