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BLASTN 2.0.11 [Jan-20-2000]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|859351|gb|G06106|G06106 human STS WI-6344.
(183 letters)
Database: data/sts
87,792 sequences; 31,998,854 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|859351|gb|G06106|G06106 human STS WI-6344. 327 1e-89
gi|1341350|gb|G21024|G21024 human STS WI-30979. 32 1.0
gi|6126285|gb|G60966.1|G60966 SHGC-84377 Human Homo sapiens STS... 30 4.1
gi|5222421|gb|G51244.1|G51244 SHGC-80725 Human Homo sapiens STS... 30 4.1
gi|1340656|gb|G20319|G20319 human STS A005L39. 30 4.1
gi|860526|gb|G07281|G07281 human STS WI-9430. 30 4.1
QUERY 1 acttgggnctacatgggccagaggtggtttattcagtctccataagagaggggacaaacg 60
558 1 ............................................................ 60
64020 49 ............... 63
41022 53 ............... 39
1005 172 ............... 158
QUERY 61 gcacagttgggtccgtgaagaggagggtccaagagctnacaagagagcctctctgagatt 120
558 61 ............................................................ 120
27080 33 .............a...... 14
QUERY 121 tgacccctncatcccctnctcagggnggttgtggagtcactgggcctcatgggntaggcc 180
558 121 ............................................................ 180
63702 184 ............... 198
QUERY 181 cag 183
558 181 ... 183
Database: data/sts
Posted date: Feb 11, 2000 2:37 PM
Number of letters in database: 31,998,854
Number of sequences in database: 87,792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1902
Number of Sequences: 87792
Number of extensions: 1902
Number of successful extensions: 481
Number of sequences better than 10.0: 8
length of query: 183
length of database: 31,998,854
effective HSP length: 16
effective length of query: 167
effective length of database: 30,594,182
effective search space: 5109228394
effective search space used: 5109228394
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 10 (19.8 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
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