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BLASTP 2.0.11 [Jan-20-2000]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|585505|sp|Q08386|MOPB_RHOCA MOLYBDENUM-PTERIN BINDING
PROTEIN MOPB
(270 letters)
Database: data/swissprot
82,258 sequences; 29,652,561 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|585505|sp|Q08386|MOPB_RHOCA MOLYBDENUM-PTERIN BINDING PROTEI... 467 e-131
gi|585504|sp|Q08385|MOPA_RHOCA MOLYBDENUM-PTERIN BINDING PROTEI... 207 2e-53
gi|585492|sp|P37733|MODA_AZOVI MOLYBDENUM TRANSPORT PROTEIN MODA 145 9e-35
gi|1709070|sp|P46930|MODE_ECOLI MOLYBDENUM TRANSPORT PROTEIN MODE 87 5e-17
gi|1709071|sp|P45324|MODE_HAEIN MOLYBDENUM TRANSPORT PROTEIN MO... 54 2e-07
gi|585502|sp|P04952|MOP1_CLOPA MOLYBDENUM-PTERIN BINDING PROTEIN I 53 6e-07
gi|127241|sp|P08854|MOP2_CLOPA MOLYBDENUM-PTERIN BINDING PROTEI... 52 1e-06
gi|585503|sp|P38366|MOP3_CLOPA MOLYBDENUM-PTERIN BINDING PROTEI... 51 3e-06
gi|1170996|sp|P45183|MOP_HAEIN PROBABLE MOLYBDENUM-PTERIN BINDI... 46 5e-05
gi|1709069|sp|P09833|MODC_ECOLI MOLYBDENUM TRANSPORT ATP-BINDIN... 38 0.021
gi|585500|sp|P37732|MODD_AZOVI MOLYBDENUM TRANSPORT ATP-BINDING... 33 0.53
gi|2507168|sp|P08838|PT1_BACSU PHOSPHOENOLPYRUVATE-PROTEIN PHOS... 30 4.6
gi|729786|sp|Q05355|HYDL_STRHA PUTATIVE POLYKETIDE HYDROXYLASE 29 7.9
>gi|585505|sp|Q08386|MOPB_RHOCA MOLYBDENUM-PTERIN BINDING PROTEIN
MOPB
Length = 270
Score = 467 bits (1189), Expect = e-131
Identities = 247/270 (91%), Positives = 247/270 (91%)
Query: 1 MAATKQGGGDDGRCARGVVLERTGARMGAERVALLAAIGRTGSISAAAREVGLSYKAAWD 60
MAATKQGGGDDGRCARGVVLERTGARMGAERVALLAAIGRTGSISAAAREVGLSYKAAWD
Sbjct: 1 MAATKQGGGDDGRCARGVVLERTGARMGAERVALLAAIGRTGSISAAAREVGLSYKAAWD 60
Query: 61 GVQAMNNXXXXXXXXXXXXXXXXXXXXXXXAGEKLIAAYGAIEAGVAKLLSSFEKSLNLD 120
GVQAMNN AGEKLIAAYGAIEAGVAKLLSSFEKSLNLD
Sbjct: 61 GVQAMNNLLAAPVVTAAPGGKAGGGAVLTPAGEKLIAAYGAIEAGVAKLLSSFEKSLNLD 120
Query: 121 PAEVLRGLSLRTSARNAWACKVWSVAADDVAAQVRMRLGEGQDLTAVITARSAAEMRLAP 180
PAEVLRGLSLRTSARNAWACKVWSVAADDVAAQVRMRLGEGQDLTAVITARSAAEMRLAP
Sbjct: 121 PAEVLRGLSLRTSARNAWACKVWSVAADDVAAQVRMRLGEGQDLTAVITARSAAEMRLAP 180
Query: 181 GSEVLALVKSNFVLLAGAGVPERLSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATI 240
GSEVLALVKSNFVLLAGAGVPERLSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATI
Sbjct: 181 GSEVLALVKSNFVLLAGAGVPERLSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATI 240
Query: 241 TRDSAEMLDLHPGVETTALIKSSHVILALP 270
TRDSAEMLDLHPGVETTALIKSSHVILALP
Sbjct: 241 TRDSAEMLDLHPGVETTALIKSSHVILALP 270
>gi|585504|sp|Q08385|MOPA_RHOCA MOLYBDENUM-PTERIN BINDING PROTEIN
MOPA
Length = 265
Score = 207 bits (521), Expect = 2e-53
Identities = 123/259 (47%), Positives = 155/259 (59%), Gaps = 13/259 (5%)
Query: 20 LERTGA-RMGAERVALLAAIGRTGSISAAAREVGLSYKAAWDGVQAMNNXXXXXXXXXXX 78
L+R GA R+G +R+ LL AI R G+I+ AAREVGLSYK AWD V +NN
Sbjct: 12 LQRAGAPRVGGDRIRLLEAIARHGTIAGAAREVGLSYKTAWDAVGTLNNLFEQPLVEAAP 71
Query: 79 XXXXXXXXXXXXAGEKLIAAYGAIEAGVAKLL-------SSFEKSLNLDPAEVLRGLSLR 131
AG+ LIA +G +E + K L S+ EK+LN L L++R
Sbjct: 72 GGRTGGNARVTEAGQALIAGFGLLEGALTKALGVLEGGVSAPEKALN-----TLWSLTMR 126
Query: 132 TSARNAWACKVWSVAADDVAAQVRMRLGEGQDLTAVITARSAAEMRLAPGSEVLALVKSN 191
TS RN C V V V A+V + L +G LTAVIT RSA EM LAPG EV AL+K++
Sbjct: 127 TSNRNTLRCTVTRVTLGAVNAEVELALTDGHSLTAVITERSATEMGLAPGVEVFALIKAS 186
Query: 192 FVLLAGAGVPERLSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATITRDSAEMLDLH 251
FV+LA G P R+S NR+ G V R D P+++E+ LDLG K+ITA IT SA+ L L
Sbjct: 187 FVMLAAGGDPGRISACNRLTGIVAARTDGPVNTEIILDLGNCKSITAVITHTSADALGLA 246
Query: 252 PGVETTALIKSSHVILALP 270
PGV TAL K+SHVILA+P
Sbjct: 247 PGVPATALFKASHVILAMP 265
>gi|585492|sp|P37733|MODA_AZOVI MOLYBDENUM TRANSPORT PROTEIN MODA
Length = 270
Score = 145 bits (362), Expect = 9e-35
Identities = 93/253 (36%), Positives = 132/253 (51%), Gaps = 8/253 (3%)
Query: 24 GARMGAERVALLAAIGRTGSISAAAREVGLSYKAAWDGVQAMNNXXXXXXXXXXXXXXXX 83
G + R+ LL AI R GSI+ AA+ V LSYKAAWD + MNN
Sbjct: 17 GTALSDTRIRLLEAIEREGSINRAAKVVPLSYKAAWDAIDTMNNLAPEPLVVRVAGGRQG 76
Query: 84 XXXXXXXAGEKLIAAYGAIEAGVAKLLSSFEKSLNLDPA-------EVLRGLSLRTSARN 136
G +++A Y A+E L + LN ++ +S++TSARN
Sbjct: 77 GGTQLTDYGRRIVAMYRALEIEYQSALDRLSERLNEVTGGDIQAFQRLMHSMSMKTSARN 136
Query: 137 AWACKVWSVAADDVAAQVRMRLGEGQDLTAVITARSAAEMRLAPGSEVLALVKSNFVLLA 196
+A V + V +VR+RL ++ AVIT SA + LA G EV ALVKS+ V+L
Sbjct: 137 QFAGIVTGLRVGGVDYEVRIRLDAENEIAAVITKASAENLELAIGKEVFALVKSSSVMLT 196
Query: 197 GAGVPERLSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATITRDSAEMLDLHPGVET 256
+L+ RN++ G VI+ + P+++EVTL L G+++T +T DS + L L PGV
Sbjct: 197 -TEPSLKLTARNQLWGEVIDIHEGPVNNEVTLALPSGRSVTCVVTADSCKALGLAPGVAA 255
Query: 257 TALIKSSHVILAL 269
A KSS VILA+
Sbjct: 256 CAFFKSSSVILAV 268
Score = 42.6 bits (98), Expect = 8e-04
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 101 AIEAGVAKLLSSFEKSLNLDPAEVLRGLSLRTSARNAWACKVWSVAADDVAAQVRMRLGE 160
AI V L+ S L +P SL+ +ARN +V + V +V + L
Sbjct: 179 AIGKEVFALVKSSSVMLTTEP-------SLKLTARNQLWGEVIDIHEGPVNNEVTLALPS 231
Query: 161 GQDLTAVITARSAAEMRLAPGSEVLALVKSNFVLLAGAG 199
G+ +T V+TA S + LAPG A KS+ V+LA G
Sbjct: 232 GRSVTCVVTADSCKALGLAPGVAACAFFKSSSVILAVYG 270
>gi|1709070|sp|P46930|MODE_ECOLI MOLYBDENUM TRANSPORT PROTEIN MODE
Length = 262
Score = 86.6 bits (211), Expect = 5e-17
Identities = 76/247 (30%), Positives = 114/247 (45%), Gaps = 17/247 (6%)
Query: 31 RVALLAAIGRTGSISAAAREVGLSYKAAWDGVQAMNNXXXXXXXXXXXXXXXXXXXXXXX 90
R++LL I +GSIS A++ G+SYK+AWD + MN
Sbjct: 21 RISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTR 80
Query: 91 AGEKLIAAY---GAIEAGVAKLLSSFEK-SLNLDPAEVLRGLSLRTSARNAWACKVWSVA 146
G++LI Y I+ +LS + LN A + R SL+TSARN W + +
Sbjct: 81 YGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISR-FSLQTSARNQWFGTITARD 139
Query: 147 ADDVAAQVRMRLGEGQD-LTAVITARSAAEMRLAPGSEVLALVKSNFVLLAGAGVPERLS 205
DDV V + L +G+ L ITA+S A + L G EVL L+K+ +V G+ + +
Sbjct: 140 HDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWV-----GITQDEA 194
Query: 206 VR----NRVRGRVIERIDAPLSSEVTLDLGGGKTITATITRDSAEMLDLHPGVETTALIK 261
V N++ G + EV + L G+T+ AT+ + E L G TA
Sbjct: 195 VAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVN--EATSLQQGQNVTAYFN 252
Query: 262 SSHVILA 268
+ VI+A
Sbjct: 253 ADSVIIA 259
>gi|1709071|sp|P45324|MODE_HAEIN MOLYBDENUM TRANSPORT PROTEIN MODE
HOMOLOG
Length = 255
Score = 54.3 bits (128), Expect = 2e-07
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 3/170 (1%)
Query: 30 ERVALLAAIGRTGSISAAAREVGLSYKAAWDGVQAMNNXXXXXXXXXXXXXXXXXXXXXX 89
+RV LL I + GSI+ AA+ +SYK+AWD ++AMN
Sbjct: 21 KRVRLLKEIQQCGSINQAAKNAKVSYKSAWDHLEAMNKISPRPLLERNTGGKNGGGTALT 80
Query: 90 XAGEKLIAAYGAIEAGVAKLLSSF-EKSLNLDP-AEVLRGLSLRTSARNAWACKVWSVAA 147
E+L+ Y +E ++S+ LD SL++SARN + +V
Sbjct: 81 TYAERLLQLYDLLERTQEHAFHILQDESVPLDSLLTATARFSLQSSARNQFFGRVAQQRI 140
Query: 148 DDVAAQVRMRL-GEGQDLTAVITARSAAEMRLAPGSEVLALVKSNFVLLA 196
D V + + G L IT +S+A ++L EV+ + K+ +V ++
Sbjct: 141 IDSRCVVDVNVQGLPTPLQVSITTKSSARLKLITEKEVMLMFKAPWVKIS 190
>gi|585502|sp|P04952|MOP1_CLOPA MOLYBDENUM-PTERIN BINDING PROTEIN I
Length = 68
Score = 53.1 bits (125), Expect = 6e-07
Identities = 25/64 (39%), Positives = 43/64 (67%)
Query: 204 LSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATITRDSAEMLDLHPGVETTALIKSS 263
+S RN+++G+V+ +++EV L++ GG IT+ I+ DS E L + G E TA+IKS+
Sbjct: 3 ISARNQLKGKVVGLKKGVITAEVVLEIAGGNKITSIISLDSVEELGVKEGAELTAVIKST 62
Query: 264 HVIL 267
V++
Sbjct: 63 DVMI 66
Score = 37.1 bits (84), Expect = 0.036
Identities = 19/63 (30%), Positives = 36/63 (56%)
Query: 133 SARNAWACKVWSVAADDVAAQVRMRLGEGQDLTAVITARSAAEMRLAPGSEVLALVKSNF 192
SARN KV + + A+V + + G +T++I+ S E+ + G+E+ A++KS
Sbjct: 4 SARNQLKGKVVGLKKGVITAEVVLEIAGGNKITSIISLDSVEELGVKEGAELTAVIKSTD 63
Query: 193 VLL 195
V++
Sbjct: 64 VMI 66
>gi|127241|sp|P08854|MOP2_CLOPA MOLYBDENUM-PTERIN BINDING PROTEIN II
Length = 68
Score = 52.3 bits (123), Expect = 1e-06
Identities = 24/64 (37%), Positives = 43/64 (66%)
Query: 204 LSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATITRDSAEMLDLHPGVETTALIKSS 263
+S RN+++G+V+ +++EV L++ GG IT+ I+ DS E L + G E TA++KS+
Sbjct: 3 ISARNQLKGKVVGLKKGVVTAEVVLEIAGGNKITSIISLDSVEELGVKEGAELTAVVKST 62
Query: 264 HVIL 267
V++
Sbjct: 63 DVMI 66
Score = 37.9 bits (86), Expect = 0.021
Identities = 21/63 (33%), Positives = 36/63 (56%)
Query: 133 SARNAWACKVWSVAADDVAAQVRMRLGEGQDLTAVITARSAAEMRLAPGSEVLALVKSNF 192
SARN KV + V A+V + + G +T++I+ S E+ + G+E+ A+VKS
Sbjct: 4 SARNQLKGKVVGLKKGVVTAEVVLEIAGGNKITSIISLDSVEELGVKEGAELTAVVKSTD 63
Query: 193 VLL 195
V++
Sbjct: 64 VMI 66
>gi|585503|sp|P38366|MOP3_CLOPA MOLYBDENUM-PTERIN BINDING PROTEIN
III
Length = 68
Score = 50.8 bits (119), Expect = 3e-06
Identities = 24/64 (37%), Positives = 43/64 (66%)
Query: 204 LSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATITRDSAEMLDLHPGVETTALIKSS 263
+S RN+++G+V+ +++EV L++ GG +T+ I+ DS E L + G E TA+IKS+
Sbjct: 3 ISARNQLKGKVVAVKKGLVTAEVVLEIAGGDKVTSIISLDSIEDLGVKEGTELTAVIKST 62
Query: 264 HVIL 267
V++
Sbjct: 63 DVMI 66
Score = 36.7 bits (83), Expect = 0.047
Identities = 20/63 (31%), Positives = 37/63 (57%)
Query: 133 SARNAWACKVWSVAADDVAAQVRMRLGEGQDLTAVITARSAAEMRLAPGSEVLALVKSNF 192
SARN KV +V V A+V + + G +T++I+ S ++ + G+E+ A++KS
Sbjct: 4 SARNQLKGKVVAVKKGLVTAEVVLEIAGGDKVTSIISLDSIEDLGVKEGTELTAVIKSTD 63
Query: 193 VLL 195
V++
Sbjct: 64 VMI 66
>gi|1170996|sp|P45183|MOP_HAEIN PROBABLE MOLYBDENUM-PTERIN BINDING
PROTEIN
Length = 69
Score = 46.5 bits (108), Expect = 5e-05
Identities = 19/67 (28%), Positives = 46/67 (68%)
Query: 203 RLSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATITRDSAEMLDLHPGVETTALIKS 262
++S RN+++G+V+ + +++ V +D+GGG +++T++ + + L+L G E A+IK+
Sbjct: 2 KISARNQLKGKVVSIENGSVNAIVHIDIGGGNVLSSTVSLAAVKELNLEVGKEAYAIIKA 61
Query: 263 SHVILAL 269
+ V++ +
Sbjct: 62 TSVMVGV 68
>gi|1709069|sp|P09833|MODC_ECOLI MOLYBDENUM TRANSPORT ATP-BINDING
PROTEIN MODC
Length = 352
Score = 37.9 bits (86), Expect = 0.021
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 201 PERLSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATITRDSAEMLDLHPGVETTALI 260
P++ S+RN +R +V+ D EV L++ GGKT+ A I+ + + L + PG+ A I
Sbjct: 287 PQQTSIRNVLRAKVVNSYDDNGQVEVELEV-GGKTLWARISPWARDELAIKPGLWLYAQI 345
Query: 261 KS 262
KS
Sbjct: 346 KS 347
>gi|585500|sp|P37732|MODD_AZOVI MOLYBDENUM TRANSPORT ATP-BINDING
PROTEIN MODD
Length = 380
Score = 33.2 bits (74), Expect = 0.53
Identities = 41/143 (28%), Positives = 62/143 (42%), Gaps = 12/143 (8%)
Query: 123 EVLRGLSLRTSARNAWACKVWSVAA--DDVAAQVRMRLGEGQDLTAVITARSAAEMRLAP 180
+++ L L T+ + SV A DD R+ G AV+ AR AP
Sbjct: 242 DIMARLDLPTAFHEDAGVVIESVVAEHDDHYHLTRLAFPGG----AVLVARRPE----AP 293
Query: 181 GSEVLALVKSNFVLLAGAGVPERLSVRNRVRGRVIERIDAPLSSEVTLDLGG-GKTITAT 239
G + V + V LA + + E S+ N + V E ++A + V + L G + A
Sbjct: 294 GQRLRLRVHARDVSLANSRI-EDSSITNVLPATVREVVEADTPAHVLVRLEAEGTPLIAR 352
Query: 240 ITRDSAEMLDLHPGVETTALIKS 262
ITR S + L + PG A IK+
Sbjct: 353 ITRRSCDQLGIAPGRRMWAQIKA 375
>gi|2507168|sp|P08838|PT1_BACSU PHOSPHOENOLPYRUVATE-PROTEIN
PHOSPHOTRANSFERASE (PHOSPHOTRANSFERASE SYSTEM, ENZYME I)
Length = 570
Score = 30.1 bits (66), Expect = 4.6
Identities = 32/141 (22%), Positives = 61/141 (42%), Gaps = 6/141 (4%)
Query: 97 AAYGAIEAGVAKLLSSFEKSLNLDP-AEVLRGLSLRTSARNAWACKVWSVAADDVAAQVR 155
AA G I+ GV ++ + +DP AE ++ + +A A + W+ ++
Sbjct: 207 AATGTIQNGVTVIVDGINGDVIIDPSAETVKEYEEKHNAYLAQKAE-WAKLVNEPTVS-- 263
Query: 156 MRLGEGQDLTAVITARSAAEMRLAPGSEVLALVKSNFVLLAGAGVPERLSVRNRVRGRVI 215
+ G +L A I + L G E + L ++ F+ + +P + + V+
Sbjct: 264 -KDGHHVELAANIGTPDDVKGVLENGGEAVGLYRTEFLYMGRDQLPTEDEQFDAYK-TVL 321
Query: 216 ERIDAPLSSEVTLDLGGGKTI 236
ER++ TLD+GG K +
Sbjct: 322 ERMEGKSVVVRTLDIGGDKEL 342
>gi|729786|sp|Q05355|HYDL_STRHA PUTATIVE POLYKETIDE HYDROXYLASE
Length = 555
Score = 29.3 bits (64), Expect = 7.9
Identities = 21/62 (33%), Positives = 29/62 (45%)
Query: 101 AIEAGVAKLLSSFEKSLNLDPAEVLRGLSLRTSARNAWACKVWSVAADDVAAQVRMRLGE 160
A+E G S+ +S DPA V + R S + + VAAD + VR +LG
Sbjct: 136 AVELGGEIRFSTELQSFEQDPAGVTAVIKSRRSGEHTTVRADYLVAADGPRSPVREQLGI 195
Query: 161 GQ 162
GQ
Sbjct: 196 GQ 197
Database: data/swissprot
Posted date: Feb 2, 2000 9:39 AM
Number of letters in database: 29,652,561
Number of sequences in database: 82,258
Lambda K H
0.316 0.131 0.361
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12068104
Number of Sequences: 82258
Number of extensions: 396723
Number of successful extensions: 1066
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1038
Number of HSP's gapped (non-prelim): 18
length of query: 270
length of database: 29,652,561
effective HSP length: 56
effective length of query: 214
effective length of database: 25,046,113
effective search space: 5359868182
effective search space used: 5359868182
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
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