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BLASTP 2.0.11 [Jan-20-2000]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|1718062|sp|P16153|UTXA_CLODI UTXA PROTEIN
(166 letters)
Database: data/swissprot
82,258 sequences; 29,652,561 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|1718062|sp|P16153|UTXA_CLODI UTXA PROTEIN 332 2e-91
gi|140528|sp|P24811|YQXH_BACSU HYPOTHETICAL 15.7 KD PROTEIN IN ... 39 0.004
gi|141088|sp|P26835|YNGD_CLOPE HYPOTHETICAL 14.9 KD PROTEIN IN ... 39 0.007
gi|6014830|sp|O78935|CYB_MARAM CYTOCHROME B 29 4.6
gi|1351589|sp|P47694|Y456_MYCGE HYPOTHETICAL PROTEIN MG456 29 6.0
gi|2496246|sp|Q57881|Y439_METJA HYPOTHETICAL ATP-BINDING PROTEI... 29 7.8
Database: data/swissprot
Posted date: Feb 2, 2000 9:39 AM
Number of letters in database: 29,652,561
Number of sequences in database: 82,258
Lambda K H
0.331 0.146 0.428
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8801581
Number of Sequences: 82258
Number of extensions: 320828
Number of successful extensions: 892
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 888
Number of HSP's gapped (non-prelim): 6
length of query: 166
length of database: 29,652,561
effective HSP length: 46
effective length of query: 120
effective length of database: 25,868,693
effective search space: 3104243160
effective search space used: 3104243160
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.9 bits)
S2: 62 (28.6 bits)
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