File: xml_2226_blastn_006.xml

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<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
  <BlastOutput_program>blastn</BlastOutput_program>
  <BlastOutput_version>BLASTN 2.2.26+</BlastOutput_version>
  <BlastOutput_reference>Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), &quot;A greedy algorithm for aligning DNA sequences&quot;, J Comput Biol 2000; 7(1-2):203-14.</BlastOutput_reference>
  <BlastOutput_db>db/duplicate_mrna</BlastOutput_db>
  <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
  <BlastOutput_query-def>gi|347972582|ref|XM_309352.4| Anopheles gambiae str. PEST AGAP011294-PA (DEFI_ANOGA) mRNA, complete cds</BlastOutput_query-def>
  <BlastOutput_query-len>309</BlastOutput_query-len>
  <BlastOutput_param>
    <Parameters>
      <Parameters_expect>10</Parameters_expect>
      <Parameters_sc-match>1</Parameters_sc-match>
      <Parameters_sc-mismatch>-2</Parameters_sc-mismatch>
      <Parameters_gap-open>0</Parameters_gap-open>
      <Parameters_gap-extend>0</Parameters_gap-extend>
      <Parameters_filter>L;m;</Parameters_filter>
    </Parameters>
  </BlastOutput_param>
  <BlastOutput_iterations>
    <Iteration>
      <Iteration_iter-num>1</Iteration_iter-num>
      <Iteration_query-ID>Query_1</Iteration_query-ID>
      <Iteration_query-def>gi|347972582|ref|XM_309352.4| Anopheles gambiae str. PEST AGAP011294-PA (DEFI_ANOGA) mRNA, complete cds</Iteration_query-def>
      <Iteration_query-len>309</Iteration_query-len>
      <Iteration_hits>
        <Hit>
          <Hit_num>1</Hit_num>
          <Hit_id>gnl|BL_ORD_ID|18</Hit_id>
          <Hit_def>gi|347972582|ref|XM_309352.4| Anopheles gambiae str. PEST AGAP011294-PA (DEFI_ANOGA) mRNA, complete cds</Hit_def>
          <Hit_accession>18</Hit_accession>
          <Hit_len>309</Hit_len>
          <Hit_hsps>
            <Hsp>
              <Hsp_num>1</Hsp_num>
              <Hsp_bit-score>571.735</Hsp_bit-score>
              <Hsp_score>309</Hsp_score>
              <Hsp_evalue>1.54135e-165</Hsp_evalue>
              <Hsp_query-from>1</Hsp_query-from>
              <Hsp_query-to>309</Hsp_query-to>
              <Hsp_hit-from>1</Hsp_hit-from>
              <Hsp_hit-to>309</Hsp_hit-to>
              <Hsp_query-frame>1</Hsp_query-frame>
              <Hsp_hit-frame>1</Hsp_hit-frame>
              <Hsp_identity>309</Hsp_identity>
              <Hsp_positive>309</Hsp_positive>
              <Hsp_gaps>0</Hsp_gaps>
              <Hsp_align-len>309</Hsp_align-len>
              <Hsp_qseq>ATGAAGTGTGCAACGATCGTCTGTACCATTGCCGTTGTGCTGGCGGCTACCCTGCTGAACGGCAGCGTCCAGGCAGCCCCGCAGGAAGAAGCGGCTTTGAGCGGTGGTGCCAATCTCAATACCCTTCTGGACGAACTGCCCGAGGAAACGCACCATGCCGCGCTGGAGAACTATCGGGCCAAGCGGGCGACCTGCGATCTGGCCAGCGGGTTCGGTGTGGGCAGCAGCCTTTGTGCCGCTCACTGTATCGCTCGCCGCTATCGCGGTGGTTACTGCAACAGTAAGGCGGTGTGTGTTTGCCGCAACTAA</Hsp_qseq>
              <Hsp_hseq>ATGAAGTGTGCAACGATCGTCTGTACCATTGCCGTTGTGCTGGCGGCTACCCTGCTGAACGGCAGCGTCCAGGCAGCCCCGCAGGAAGAAGCGGCTTTGAGCGGTGGTGCCAATCTCAATACCCTTCTGGACGAACTGCCCGAGGAAACGCACCATGCCGCGCTGGAGAACTATCGGGCCAAGCGGGCGACCTGCGATCTGGCCAGCGGGTTCGGTGTGGGCAGCAGCCTTTGTGCCGCTCACTGTATCGCTCGCCGCTATCGCGGTGGTTACTGCAACAGTAAGGCGGTGTGTGTTTGCCGCAACTAA</Hsp_hseq>
              <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
            </Hsp>
          </Hit_hsps>
        </Hit>
        <Hit>
          <Hit_num>2</Hit_num>
          <Hit_id>gnl|BL_ORD_ID|17</Hit_id>
          <Hit_def>gi|347972582|ref|XM_309352.4| Anopheles gambiae str. PEST AGAP011294-PA (DEFI_ANOGA) mRNA, complete cds</Hit_def>
          <Hit_accession>17</Hit_accession>
          <Hit_len>309</Hit_len>
          <Hit_hsps>
            <Hsp>
              <Hsp_num>1</Hsp_num>
              <Hsp_bit-score>571.735</Hsp_bit-score>
              <Hsp_score>309</Hsp_score>
              <Hsp_evalue>1.54135e-165</Hsp_evalue>
              <Hsp_query-from>1</Hsp_query-from>
              <Hsp_query-to>309</Hsp_query-to>
              <Hsp_hit-from>1</Hsp_hit-from>
              <Hsp_hit-to>309</Hsp_hit-to>
              <Hsp_query-frame>1</Hsp_query-frame>
              <Hsp_hit-frame>1</Hsp_hit-frame>
              <Hsp_identity>309</Hsp_identity>
              <Hsp_positive>309</Hsp_positive>
              <Hsp_gaps>0</Hsp_gaps>
              <Hsp_align-len>309</Hsp_align-len>
              <Hsp_qseq>ATGAAGTGTGCAACGATCGTCTGTACCATTGCCGTTGTGCTGGCGGCTACCCTGCTGAACGGCAGCGTCCAGGCAGCCCCGCAGGAAGAAGCGGCTTTGAGCGGTGGTGCCAATCTCAATACCCTTCTGGACGAACTGCCCGAGGAAACGCACCATGCCGCGCTGGAGAACTATCGGGCCAAGCGGGCGACCTGCGATCTGGCCAGCGGGTTCGGTGTGGGCAGCAGCCTTTGTGCCGCTCACTGTATCGCTCGCCGCTATCGCGGTGGTTACTGCAACAGTAAGGCGGTGTGTGTTTGCCGCAACTAA</Hsp_qseq>
              <Hsp_hseq>ATGAAGTGTGCAACGATCGTCTGTACCATTGCCGTTGTGCTGGCGGCTACCCTGCTGAACGGCAGCGTCCAGGCAGCCCCGCAGGAAGAAGCGGCTTTGAGCGGTGGTGCCAATCTCAATACCCTTCTGGACGAACTGCCCGAGGAAACGCACCATGCCGCGCTGGAGAACTATCGGGCCAAGCGGGCGACCTGCGATCTGGCCAGCGGGTTCGGTGTGGGCAGCAGCCTTTGTGCCGCTCACTGTATCGCTCGCCGCTATCGCGGTGGTTACTGCAACAGTAAGGCGGTGTGTGTTTGCCGCAACTAA</Hsp_hseq>
              <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
            </Hsp>
          </Hit_hsps>
        </Hit>
      </Iteration_hits>
      <Iteration_stat>
        <Statistics>
          <Statistics_db-num>24</Statistics_db-num>
          <Statistics_db-len>68059</Statistics_db-len>
          <Statistics_hsp-len>16</Statistics_hsp-len>
          <Statistics_eff-space>19828775</Statistics_eff-space>
          <Statistics_kappa>0.46</Statistics_kappa>
          <Statistics_lambda>1.28</Statistics_lambda>
          <Statistics_entropy>0.85</Statistics_entropy>
        </Statistics>
      </Iteration_stat>
    </Iteration>
  </BlastOutput_iterations>
</BlastOutput>