File: exn_22_q_multiple_vulgar.exn

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Command line: [exonerate -m est2genome comb.fa /media/Waterloo/Downloads/genomes/scer_s288c/scer_s288c.fa --bestn 3 --showalignment no --showvulgar yes]
Hostname: [blackbriar]
vulgar: gi|296142823|ref|NM_001178508.1| 0 897 + gi|330443482|ref|NC_001134.8| 560077 560974 + 4485 M 897 897
vulgar: gi|296142823|ref|NM_001178508.1| 2 896 + gi|330443753|ref|NC_001148.4| 492933 492033 - 941 M 4 4 G 2 0 M 21 21 G 1 0 M 51 51 G 2 0 M 6 6 G 3 0 M 11 11 G 3 0 M 1 1 G 1 0 M 26 26 G 3 0 M 102 102 G 1 0 M 1 1 G 1 0 M 1 1 G 1 0 M 55 55 G 0 3 M 5 5 G 2 0 M 7 7 G 0 1 M 4 4 G 0 1 M 9 9 G 1 0 M 3 3 G 0 1 M 2 2 G 0 2 M 2 2 G 0 3 M 3 3 G 0 1 M 22 22 G 0 1 M 9 9 G 1 0 M 68 68 G 0 1 M 3 3 G 1 0 M 174 174 G 1 0 M 8 8 G 0 1 M 154 154 G 0 3 M 8 8 G 0 1 M 4 4 G 0 2 M 9 9 G 0 2 M 1 1 G 0 1 M 5 5 G 0 6 M 53 53 G 0 1 M 14 14 G 1 0 M 23 23
vulgar: gi|296142823|ref|NM_001178508.1| 34 721 + gi|330443520|ref|NC_001136.10| 267809 300717 + 651 M 34 34 G 1 0 M 8 8 G 1 0 M 1 1 G 2 0 M 7 7 G 0 4 M 4 4 G 2 0 M 3 3 G 3 0 M 10 10 G 3 0 M 28 28 G 1 0 M 34 34 G 1 0 M 6 6 G 0 2 M 10 10 G 0 1 M 14 14 G 0 1 M 15 15 G 1 0 M 12 12 G 1 0 M 1 1 G 1 0 M 3 3 G 3 0 M 28 28 G 8 0 M 3 3 G 2 0 M 21 21 G 2 0 M 7 7 G 0 4 M 2 2 G 0 2 M 6 6 G 0 3 M 13 13 G 0 2 M 4 4 G 0 1 M 11 11 G 5 0 M 6 6 G 2 0 M 12 12 G 0 1 M 52 52 G 1 0 M 7 7 G 0 1 M 55 55 G 0 1 M 7 7 G 3 0 M 13 13 G 0 2 M 100 100 G 0 1 M 6 6 G 1 0 M 40 40 G 2 0 M 6 6 G 0 2 M 22 22 3 0 2 I 0 32234 5 0 2 M 12 12 G 0 1 M 18 18
vulgar: gi|296143771|ref|NM_001180731.1| 0 1230 + gi|330443520|ref|NC_001136.10| 1319275 1318045 - 6150 M 1230 1230
vulgar: gi|296143771|ref|NM_001180731.1| 0 346 + gi|330443688|ref|NC_001145.3| 85010 473201 + 439 M 11 11 G 1 0 M 15 15 G 2 0 M 4 4 G 1 0 M 1 1 G 1 0 M 8 8 G 4 0 M 17 17 5 0 2 I 0 168904 3 0 2 M 4 4 G 0 1 M 8 8 G 1 0 M 3 3 G 2 0 M 33 33 G 0 1 M 7 7 G 0 2 M 102 102 5 0 2 I 0 96820 3 0 2 M 14 14 G 0 2 M 10 10 G 2 0 M 5 5 G 0 2 M 10 10 G 2 0 M 4 4 G 0 1 M 20 20 G 1 0 M 15 15 G 0 1 M 5 5 G 3 0 M 4 4 5 0 2 I 0 122114 3 0 2 M 20 20 G 0 5 M 6 6
vulgar: gi|296143771|ref|NM_001180731.1| 25 406 + gi|330443688|ref|NC_001145.3| 130198 11338 - 263 M 14 14 G 0 1 M 4 4 G 2 0 M 25 25 G 0 1 M 9 9 G 0 6 M 42 42 G 2 0 M 16 16 G 0 2 M 7 7 G 0 1 M 3 3 G 2 0 M 23 23 G 3 0 M 6 6 3 0 2 I 0 9353 5 0 2 M 1 1 G 1 0 M 11 11 G 0 1 M 12 12 G 1 0 M 9 9 G 0 1 M 10 10 G 1 0 M 18 18 G 0 1 M 5 5 3 0 2 I 0 109121 5 0 2 M 16 16 G 4 0 M 4 4 G 1 0 M 11 11 G 5 0 M 8 8 G 1 0 M 22 22 G 0 2 M 4 4 G 0 2 M 34 34 G 0 1 M 3 3 G 0 1 M 41 41
-- completed exonerate analysis