1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
|
^SAMPLE=GSM645
!Sample_status = Public on Dec 17 2001
!Sample_title = Large Pre-BII cells 8b
!Sample_type = single channel
!Sample_organism = Mus musculus
!Sample_target_source = Large Pre-BII cells
!Sample_description = B220+CD25+sIg- Large Pre BII cells sorted out of mouse bone marrow, sort no. 8
!Sample_author = Reinhard,,Hoffmann
!Sample_author = Thomas,,Seidl
!Sample_author = Ton,,Rolink
!Sample_author = Fritz,,Melchers
!Sample_submission_date = Nov 27 2001
!Sample_submitter_name = Reinhard,,Hoffmann
!Sample_submitter_email = r_hoffmann@m3401.mpk.med.uni-muenchen.de
!Sample_submitter_institute = Max von Pettenkofer Institut
!Sample_submitter_department = Bacteriology
!Sample_submitter_address = Pettenkoferstr. 9a
!Sample_submitter_city = Munich,80336,Germany
!Sample_submitter_phone = +49-89-5160-5424
!Sample_platform_id = GPL22
!Sample_series_id = GSE13
#ID_REF = Affymetrix Probe Set Identifier
#Experiment Name = Experiment Name
#POSITIVE = number of poisitive probe pairs
#NEGATIVE = number of negative probe pairs
#PAIRS = number of probe set specific probe pairs on the array
#PAIRS_USED =
#PAIRS_IN_AVG = Trimmed probe pair set
#POS_FRACTION = Positive/Pairs Used
#Log Avg =
#PM Excess = number of probe pairs where PM/MM exceeds the ratio limit (10 by default)
#MM Excess = Number of probe peirs where MM/PM exceeds 1/ratio limit (10 by default)
#POS/NEG = Positive/Negative
#VALUE = Average Difference Intensity
#ABS_CALL = Whether a probe set is present, marginal, or absent; see Affymetrix Literature
ID_REF Experiment Name POSITIVE NEGATIVE PAIRS PAIRS_USED PAIRS_IN_AVG POS_FRACTION Log Avg PM Excess MM Excess POS/NEG VALUE ABS_CALL
IL2_at RHMu8LarB 4 4 19 19 19 0.21 -0.58 0 0 1.0 -78 A
IL10_at RHMu8LarB 7 4 20 20 18 0.35 1.87 1 0 1.8 161 A
GMCSF_at RHMu8LarB 4 4 20 20 19 0.20 0.39 0 0 1.0 -11 A
TNFRII_at RHMu8LarB 2 2 20 20 18 0.10 0.48 0 0 1.0 52 A
MIP1-B_at RHMu8LarB 6 4 20 20 19 0.30 0.43 0 0 1.5 373 A
IL4_at RHMu8LarB 3 3 20 20 19 0.15 0.29 0 0 1.0 27 A
IL12_P40_at RHMu8LarB 3 5 20 20 19 0.15 -0.22 0 0 0.6 -163 A
TNFa_at RHMu8LarB 3 4 20 20 20 0.15 -0.57 1 0 0.8 -95 A
TCRa_at RHMu8LarB 1 4 20 20 19 0.05 -0.50 0 0 0.3 -186 A
AFFX-BioB-5_at RHMu8LarB 0 1 20 20 19 0.00 0.35 0 0 0.0 120 A
AFFX-BioB-M_at RHMu8LarB 0 1 20 20 19 0.00 0.02 0 0 0.0 -13 A
AFFX-BioB-3_at RHMu8LarB 2 0 20 20 19 0.10 0.38 0 0 Undef 136 A
AFFX-BioC-5_at RHMu8LarB 9 0 20 20 20 0.45 1.33 0 0 Undef 606 P
AFFX-BioC-3_at RHMu8LarB 2 0 20 20 19 0.10 0.64 0 0 Undef 257 A
AFFX-BioDn-5_at RHMu8LarB 8 0 20 20 20 0.40 1.23 0 0 Undef 380 P
AFFX-BioDn-3_at RHMu8LarB 16 0 20 20 19 0.80 2.79 0 0 Undef 2764 P
AFFX-CreX-5_at RHMu8LarB 19 0 20 20 19 0.95 5.65 0 0 Undef 4391 P
AFFX-CreX-3_at RHMu8LarB 19 0 20 20 20 0.95 6.42 2 0 Undef 10787 P
AFFX-BioB-5_st RHMu8LarB 5 3 20 20 19 0.25 0.48 0 0 1.7 80 A
AFFX-BioB-M_st RHMu8LarB 2 3 20 20 17 0.10 0.16 0 0 0.7 24 A
|
