File: opuntia.aln

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python-biopython 1.68%2Bdfsg-3~bpo8%2B1
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CLUSTAL 2.1 multiple sequence alignment


gi|6273285|gb|AF191659.1|AF191      TATACATTAAAGAAGGGGGATGCGGATAAATGGAAAGGCGAAAGAAAGAA
gi|6273284|gb|AF191658.1|AF191      TATACATTAAAGAAGGGGGATGCGGATAAATGGAAAGGCGAAAGAAAGAA
gi|6273287|gb|AF191661.1|AF191      TATACATTAAAGAAGGGGGATGCGGATAAATGGAAAGGCGAAAGAAAGAA
gi|6273286|gb|AF191660.1|AF191      TATACATAAAAGAAGGGGGATGCGGATAAATGGAAAGGCGAAAGAAAGAA
gi|6273290|gb|AF191664.1|AF191      TATACATTAAAGGAGGGGGATGCGGATAAATGGAAAGGCGAAAGAAAGAA
gi|6273289|gb|AF191663.1|AF191      TATACATTAAAGGAGGGGGATGCGGATAAATGGAAAGGCGAAAGAAAGAA
gi|6273291|gb|AF191665.1|AF191      TATACATTAAAGGAGGGGGATGCGGATAAATGGAAAGGCGAAAGAAAGAA
                                    ******* **** *************************************

gi|6273285|gb|AF191659.1|AF191      AAAAATGAATCTAAATGATATACGATTCCACTATGTAAGGTCTTTGAATC
gi|6273284|gb|AF191658.1|AF191      AAAAATGAATCTAAATGATATACGATTCCACTATGTAAGGTCTTTGAATC
gi|6273287|gb|AF191661.1|AF191      AAAAATGAATCTAAATGATATACGATTCCACTATGTAAGGTCTTTGAATC
gi|6273286|gb|AF191660.1|AF191      AAAAATGAATCTAAATGATATACGATTCCACTATGTAAGGTCTTTGAATC
gi|6273290|gb|AF191664.1|AF191      AAAAATGAATCTAAATGATATAGGATTCCACTATGTAAGGTCTTTGAATC
gi|6273289|gb|AF191663.1|AF191      AAAAATGAATCTAAATGATATAGGATTCCACTATGTAAGGTCTTTGAATC
gi|6273291|gb|AF191665.1|AF191      AAAAATGAATCTAAATGATATAGGATTCCACTATGTAAGGTCTTTGAATC
                                    ********************** ***************************

gi|6273285|gb|AF191659.1|AF191      ATATCATAAAAGACAATGTAATAAAGCATGAATACAGATTCACACATAAT
gi|6273284|gb|AF191658.1|AF191      ATATCATAAAAGACAATGTAATAAAGCATGAATACAGATTCACACATAAT
gi|6273287|gb|AF191661.1|AF191      ATATCATAAAAGACAATGTAATAAAGCATGAATACAGATTCACACATAAT
gi|6273286|gb|AF191660.1|AF191      ATATCATAAAAGACAATGTAATAAAGCATGAATACAGATTCACACATAAT
gi|6273290|gb|AF191664.1|AF191      ATATCATAAAAGACAATGTAATAAAGCATGAATACAGATTCACACATAAT
gi|6273289|gb|AF191663.1|AF191      ATATCATAAAAGACAATGTAATAAAGCATGAATACAGATTCACACATAAT
gi|6273291|gb|AF191665.1|AF191      ATATCATAAAAGACAATGTAATAAAGCATGAATACAGATTCACACATAAT
                                    **************************************************

gi|6273285|gb|AF191659.1|AF191      TATCTGATATGAATCTATTCATAGAAAAAAGAAAAAAGTAAGAGCCTCCG
gi|6273284|gb|AF191658.1|AF191      TATCTGATATGAATCTATTCATAGAAAAAAGAAAAAAGTAAGAGCCTCCG
gi|6273287|gb|AF191661.1|AF191      TATCTGATATGAATCTATTCATAGAAAAAAGAAAAAAGTAAGAGCCTCCG
gi|6273286|gb|AF191660.1|AF191      TATCTGATATGAATCTATTCATAGAAAAAAGAAAAAAGTAAGAGCCTCCG
gi|6273290|gb|AF191664.1|AF191      TATCTGATATGAATCTATTCATAGAAAAAAGAAAAAAGTAAGAGCCTCCG
gi|6273289|gb|AF191663.1|AF191      TATCTGATATGAATCTATTCATAGAAAAAAGAAAAAAGTAAGAGCCTCCG
gi|6273291|gb|AF191665.1|AF191      TATCTGATATGAATCTATTCATAGAAAAAAGAAAAAAGTAAGAGCCTCCG
                                    **************************************************

gi|6273285|gb|AF191659.1|AF191      GCCAATAAAGACTAAGAGGGTTGGCTCAAGAACAAAGTTCATTAAGAGCT
gi|6273284|gb|AF191658.1|AF191      GCCAATAAAGACTAAGAGGGTTGGCTCAAGAACAAAGTTCATTAAGAGCT
gi|6273287|gb|AF191661.1|AF191      GCCAATAAAGACTAAGAGGGTTGGCTCAAGAACAAAGTTCATTAAGAGCT
gi|6273286|gb|AF191660.1|AF191      GCCAATAAAGACTAAGAGGGTTGGCTCAAGAACAAAGTTCATTAAGAGCT
gi|6273290|gb|AF191664.1|AF191      GCCAATAAAGACTAAGAGGGTTGGCTCAAGAACAAAGTTCATTAAGAGCT
gi|6273289|gb|AF191663.1|AF191      GCCAATAAAGACTAAGAGGGTTGGCTCAAGAACAAAGTTCATTAAGAGCT
gi|6273291|gb|AF191665.1|AF191      GCCAATAAAGACTAAGAGGGTTGGCTCAAGAACAAAGTTCATTAAGAGCT
                                    **************************************************

gi|6273285|gb|AF191659.1|AF191      CCATTGTAGAATTCAGACCTAATCATTAATCAAGAAGCGATGGGAACGAT
gi|6273284|gb|AF191658.1|AF191      CCATTGTAGAATTCAGACCTAATCATTAATCAAGAAGCGATGGGAACGAT
gi|6273287|gb|AF191661.1|AF191      CCATTGTAGAATTCAGACCTAATCATTAATCAAGAAGCGATGGGAACGAT
gi|6273286|gb|AF191660.1|AF191      CCATTGTAGAATTCAGACCTAATCATTAATCAAGAAGCGATGGGAACGAT
gi|6273290|gb|AF191664.1|AF191      CCATTGTAGAATTCAGACCTAATCATTAATCAAGAAGCGATGGGAACGAT
gi|6273289|gb|AF191663.1|AF191      CCATTGTAGAATTCAGACCTAATCATTAATCAAGAAGCGATGGGAACGAT
gi|6273291|gb|AF191665.1|AF191      CCATTGTAGAATTCAGACCTAATCATTAATCAAGAAGCGATGGGAACGAT
                                    **************************************************

gi|6273285|gb|AF191659.1|AF191      GTAATCCATGAATACAGAAGATTCAATTGAAAAAGATCCTAA-TGATCAT
gi|6273284|gb|AF191658.1|AF191      GTAATCCATGAATACAGAAGATTCAATTGAAAAAGATCCTAA-TGATCAT
gi|6273287|gb|AF191661.1|AF191      GTAATCCATGAATACAGAAGATTCAATTGAAAAAGATCCTAT-GATCCAT
gi|6273286|gb|AF191660.1|AF191      GTAATCCATGAATACAGAAGATTCAATTGAAAAAGATCCTAA-TGATCAT
gi|6273290|gb|AF191664.1|AF191      GTAATCCATGAATACAGAAGATTCAATTGAAAAAGATCCTAATGNTNCAT
gi|6273289|gb|AF191663.1|AF191      GTAATCCATGAATACAGAAGATTCAATTGAAAAAGATCCTAATGATTCAT
gi|6273291|gb|AF191665.1|AF191      GTAATCCATGAATACAGAAGATTCAATTGAAAAAGATCCTA--TGNTCAT
                                    *****************************************      ***

gi|6273285|gb|AF191659.1|AF191      TGGGAAGGATGGCGGAACGAACCAGAGACCAATTCATCTATTCTGAAAAG
gi|6273284|gb|AF191658.1|AF191      TGGGAAGGATGGCGGAACGAACCAGAGACCAATTCATCTATTCTGAAAAG
gi|6273287|gb|AF191661.1|AF191      TGGGAAGGATGGCGGAACGAACCAGAGACCAATTCATCTATTCTGAAAAG
gi|6273286|gb|AF191660.1|AF191      TGG-AAGGATGGCGGAACGAACCAGAGACCAATTCATCTATTCTGAAAAG
gi|6273290|gb|AF191664.1|AF191      TGGGAAGGATGGCGGAACGAACCAGAGACCAATTCATCTATTCTGAAAAG
gi|6273289|gb|AF191663.1|AF191      TGGGAAGGATGGCGGAACGAACCAGAGACCAATTCATCTATTCTGAAAAG
gi|6273291|gb|AF191665.1|AF191      TGG-AAGGATGGCGGAACGAACCAGAGACCAATTCATCTATTCTGAAAAG
                                    *** **********************************************

gi|6273285|gb|AF191659.1|AF191      TGATAAACTAATCCTATAAAACTAAAATAGATATTGAAAGAGTAAATATT
gi|6273284|gb|AF191658.1|AF191      TGATAAACTAATCCTATAAAACTAAAATAGATATTGAAAGAGTAAATATT
gi|6273287|gb|AF191661.1|AF191      TGATAAACTAATCCTATAAAACTAAAATAGATATTGAAAGAGTAAATATT
gi|6273286|gb|AF191660.1|AF191      TGATAAACTAATCCTATAAAACTAAAATAGATATTGAAAGAGTAAATATT
gi|6273290|gb|AF191664.1|AF191      TGATAAACTAATCCTATAAAACTAAAATAGATATTGAAAGAGTAAATATT
gi|6273289|gb|AF191663.1|AF191      TGATAAACTAATCCTATAAAACTAAAATAGATATTGAAAGAGTAAATATT
gi|6273291|gb|AF191665.1|AF191      TGATAAACTAATCCTATAAAACTAAAATAGATATTGAAAGAGTAAATATT
                                    **************************************************

gi|6273285|gb|AF191659.1|AF191      CGCCCGCGAAAATTCCTTTTTTATT-AAATTGCTCATATTTTATTTTAGC
gi|6273284|gb|AF191658.1|AF191      CGCCCGCGAAAATTCCTTTTTTATT-AAATTGCTCATATTTTATTTTAGC
gi|6273287|gb|AF191661.1|AF191      CGCCCGCGAAAATTCCTTTTTTTTTTAAATTGCTCATATTTTATTTTAGC
gi|6273286|gb|AF191660.1|AF191      CGCCCGCGAAAATTCCTTTTTTATT-AAATTGCTCATATTTTATTTTAGC
gi|6273290|gb|AF191664.1|AF191      CGCCCGCGAAAATTCCTTTTTTATT-AAATTGCTCATATTTTCTTTTAGC
gi|6273289|gb|AF191663.1|AF191      CGCCCGCGAAAATTCCTTTTTTATT-AAATTGCTCATATTTTCTTTTAGC
gi|6273291|gb|AF191665.1|AF191      CGCCCGCGAAAATTCCTTTTTTATT-AAATTGCTCATATTTTCTTTTAGC
                                    ********************** ** **************** *******

gi|6273285|gb|AF191659.1|AF191      AATGCAATCTAATAAAATATATCTATACAAAAAAATATAGACAAACTATA
gi|6273284|gb|AF191658.1|AF191      AATGCAATCTAATAAAATATATCTATACAAAAAAATATAGACAAACTATA
gi|6273287|gb|AF191661.1|AF191      AATGCAATCTAATAAAATATATCTATACAAAAAAATAAAGACAAACTATA
gi|6273286|gb|AF191660.1|AF191      AATGCAATCTAATAAAATATATCTATACAAAAAAATATAGACAAACTATA
gi|6273290|gb|AF191664.1|AF191      AATGCAATCTAATAAAATATATCTATACAAAAAAACATAGACAAACTATA
gi|6273289|gb|AF191663.1|AF191      AATGCAATCTAATAAAATATATCTATACAAAAAAACATAGACAAACTATA
gi|6273291|gb|AF191665.1|AF191      AATGCAATCTAATAAAATATATCTATACAAAAAAACATAGACAAACTATA
                                    *********************************** * ************

gi|6273285|gb|AF191659.1|AF191      TATATA----------ATATATTTCAAATTTCCTTATATACCCAAATATA
gi|6273284|gb|AF191658.1|AF191      TATATATA--------ATATATTTCAAATTTCCTTATATACCCAAATATA
gi|6273287|gb|AF191661.1|AF191      TATATA----------ATATATTTCAAATTTCCTTATATATCCAAATATA
gi|6273286|gb|AF191660.1|AF191      TATATA----------ATATATTTATAATTTCCTTATATATCCAAATATA
gi|6273290|gb|AF191664.1|AF191      TATATATATA------ATATATTTCAAATTCCCTTATATATCCAAATATA
gi|6273289|gb|AF191663.1|AF191      TATATATATA------ATATATTTCAAATTCCCTTATATATCCAAATATA
gi|6273291|gb|AF191665.1|AF191      TATATATATATATATAATATATTTCAAATTCCCTTATATATCCAAATATA
                                    ******          ********  **** ********* *********

gi|6273285|gb|AF191659.1|AF191      AAAATATCTAATAAATTAGATGAATATCAAAGAATCCATTGATTTAGTGT
gi|6273284|gb|AF191658.1|AF191      AAAATATCTAATAAATTAGATGAATATCAAAGAATCTATTGATTTAGTGT
gi|6273287|gb|AF191661.1|AF191      AAAATATCTAATAAATTAGATGAATATCAAAGAATCTATTGATTTAGTGT
gi|6273286|gb|AF191660.1|AF191      AAAATATCTAATAAATTAGATGAATATCAAAGAATCTATTGATTTAGTGT
gi|6273290|gb|AF191664.1|AF191      AAAATATCTAATAAATTAGATGAATATCAAAGAATCTATTGATTTAGTGT
gi|6273289|gb|AF191663.1|AF191      AAAATATCTAATAAATTAGATGAATATCAAAGAATCTATTGATTTAGTAT
gi|6273291|gb|AF191665.1|AF191      AAAATATCTAATAAATTAGATGAATATCAAAGAATCTATTGATTTAGTGT
                                    ************************************ *********** *

gi|6273285|gb|AF191659.1|AF191      ATTATTAAATGTATATCTTAATTCAATATTATTATTCTATTCATTTTTAT
gi|6273284|gb|AF191658.1|AF191      ATTATTAAATGTATATCTTAATTCAATATTATTATTCTATTCATTTTTAT
gi|6273287|gb|AF191661.1|AF191      ATTATTAAATGTATATCTTAATTCAATATTATTATTCTATTCATTTTTAT
gi|6273286|gb|AF191660.1|AF191      ATTATTAAATGTATATCTTAATTCAATATTATTATTCTATTCATTTTTAT
gi|6273290|gb|AF191664.1|AF191      ATTATTAAATGTATATATTAATTCAATATTATTATTCTATTCATTTTTAT
gi|6273289|gb|AF191663.1|AF191      ATTATTAAATGTATATATTAATTCAATATTATTATTCTATTCATTTTTAT
gi|6273291|gb|AF191665.1|AF191      ATTATTAAATGTATATATTAATTCAATATTATTATTCTATTCATTTTTAT
                                    **************** *********************************

gi|6273285|gb|AF191659.1|AF191      TCATTTTCAAATTTATAATATATTAATCTATATATTAATTTATAATTCTA
gi|6273284|gb|AF191658.1|AF191      TCATTTTCAAATTTATAATATATTAATCTATATATTAATTTATAATTCTA
gi|6273287|gb|AF191661.1|AF191      TCATTTTCAATTTTATAATATATTAATCTATATATTAATTTATAATTCTA
gi|6273286|gb|AF191660.1|AF191      TCATTTTCAAATTTATAATATATTAATCTATATATTAATTTATAATTCTA
gi|6273290|gb|AF191664.1|AF191      TCATTTTCAAATTTATAATATATTAATCTATATATTAATTTAGAATTCTA
gi|6273289|gb|AF191663.1|AF191      TCATTTTCAAATTTATAATATATTAATCTATATATTAATTTAGAATTCTA
gi|6273291|gb|AF191665.1|AF191      TCATTTTCAAATTTATAATATATTAATCTATATATTAATTTAGAATTCTA
                                    ********** ******************************* *******

gi|6273285|gb|AF191659.1|AF191      TTCTAATTCGAATTCAATTTTTAAATATTCATATTCAATTAAAATTGAAA
gi|6273284|gb|AF191658.1|AF191      TTCTAATTCGAATTCAATTTTTAAATATTCATATTCAATTAAAATTGAAA
gi|6273287|gb|AF191661.1|AF191      TTCTAATTCGAATTCAATTTTTAAATATTCATATTCAATTAAAATTGAAA
gi|6273286|gb|AF191660.1|AF191      TTCTAATTCGAATTCAATTTTTAAATATTCATATTCAATTAAAATTGAAA
gi|6273290|gb|AF191664.1|AF191      TTCTAATTCGAATTCAATTTTTAAATATTCATATTCAATTAAAATTGAAA
gi|6273289|gb|AF191663.1|AF191      TTCTAATTCGAATTCAATTTTTAAATATTCATATTCAATTAAAATTGAAA
gi|6273291|gb|AF191665.1|AF191      TTCTAATTCGAATTCAATTTTTAAATATTCATATTCAATTAAAATTGAAA
                                    **************************************************

gi|6273285|gb|AF191659.1|AF191      TTTTTTCATTCGCGAGGAGCCGGATGAGAAGAAACTCTCATGTCCGGTTC
gi|6273284|gb|AF191658.1|AF191      TTTTTTCATTCGCGAGGAGCCGGATGAGAAGAAACTCTCATGTCCGGTTC
gi|6273287|gb|AF191661.1|AF191      TTTTTTCATTCGCGAGGAGCCGGATGAGAAGAAACTCTCATGTCCGGTTC
gi|6273286|gb|AF191660.1|AF191      TTTTTTCATTCGCGAGGAGCCGGATGAGAAGAAACTCTCATGTCCGGTTC
gi|6273290|gb|AF191664.1|AF191      TTTTTTCATTCGCGAGGAGCCGGATGAGAAGAAACTCTCATGTCCGGTTC
gi|6273289|gb|AF191663.1|AF191      TTTTTTCATTCGCGAGGAGCCGGATGAGAAGAAACTCTCATGTCCGGTTC
gi|6273291|gb|AF191665.1|AF191      TTTTTTCATTCGCGAGGAGCCGGATGAGAAGAAACTCTCATGTCCGGTTC
                                    **************************************************

gi|6273285|gb|AF191659.1|AF191      TGTAGTAGAGATGGAATTAAGAAAAAACCATCAACTATAACCCCAAGAGA
gi|6273284|gb|AF191658.1|AF191      TGTAGTAGAGATGGAATTAAGAAAAAACCATCAACTATAACCCCAAGAGA
gi|6273287|gb|AF191661.1|AF191      TGTAGTAGAGATGGAATTAAGAAAAAACCATCAACTATAACCCCAAGAGA
gi|6273286|gb|AF191660.1|AF191      TGTAGTAGAGATGGAATTAAGAAAAAACCATCAACTATAACCCCAAGAGA
gi|6273290|gb|AF191664.1|AF191      TGTAGTAGAGATGGAATTAAGAAAAAACCATCAACTATAACCCCAAAAGA
gi|6273289|gb|AF191663.1|AF191      TGTAGTAGAGATGGAATTAAGAAAAAACCATCAACTATAACCCCAAAAGA
gi|6273291|gb|AF191665.1|AF191      TGTAGTAGAGATGGAATTAAGAAAAAACCATCAACTATAACCCCAAAAGA
                                    ********************************************** ***

gi|6273285|gb|AF191659.1|AF191      ACCAGA
gi|6273284|gb|AF191658.1|AF191      ACCAGA
gi|6273287|gb|AF191661.1|AF191      ACCAGA
gi|6273286|gb|AF191660.1|AF191      ACCAGA
gi|6273290|gb|AF191664.1|AF191      ACCAGA
gi|6273289|gb|AF191663.1|AF191      ACCAGA
gi|6273291|gb|AF191665.1|AF191      ACCAGA
                                    ******