1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
|
# Copyright 2015 by Kai Blin. All rights reserved.
# This code is part of the Biopython distribution and governed by its
# license. Please see the LICENSE file that should have been included
# as part of this package.
"""Tests Bio.SeqFeature.
"""
import unittest
from os import path
from Bio import SeqIO
class TestReference(unittest.TestCase):
"""Tests for the SeqFeature.Reference class"""
def test_eq_identical(self):
"""Test two identical references eq() to True"""
testfile = path.join('GenBank', 'origin_line.gb')
rec1 = SeqIO.read(testfile, 'genbank')
rec2 = SeqIO.read(testfile, 'genbank')
self.assertEqual(rec1.annotations['references'][0], rec1.annotations['references'][0])
cmp1, cmp2 = rec1.annotations['references'][0], rec2.annotations['references'][0]
self.assertEqual(cmp1, cmp2)
self.assertNotEqual(rec1.annotations['references'][0], rec1.annotations['references'][1])
self.assertNotEqual(rec1.annotations['references'][0], rec2.annotations['references'][1])
self.assertEqual(rec1.annotations['references'][1], rec1.annotations['references'][1])
self.assertEqual(rec1.annotations['references'][1], rec2.annotations['references'][1])
|
