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#Ignore the build directory (and its sub-directories):
build
#Ignore the distribution directory
dist
#Ignore backup files from some Unix editors,
\#*.py\#
*~
*.swp
*.bak
#Ignore patches and any original files created by patch command
*.diff
*.patch
*.orig
*.rej
#Ignore these hidden files from Mac OS X
.DS_Store
#Ignore hidden files from Dolphin window manager
.directory
#Ignore all compiled python files (e.g. from running the unit tests):
*.pyc
*.pyo
*.py{}
*.py-e
#Ignore all Jython class files (present if using Jython)
*.class
#Ignore the .tox directory from running tox locally
.tox/
#Ignore the MANIFEST file created automatically from MANIFEST.in
MANIFEST
#Ignore potential directory created during install:
biopython.egg-info
#The graphics unit tests produce output files for human inspection
#(at the time of writing, only PDF and PNG files are created)
Tests/Graphics/*.pdf
Tests/Graphics/*.eps
Tests/Graphics/*.svg
Tests/Graphics/*.png
#Ignore the local BioSQL test settings:
Tests/biosql.ini
#TODO - The unit tests shouldn't leave temp files after running:
Tests/BioSQL/temp_sqlite.db
Tests/BioSQL/temp_sqlite.db-journal
Tests/Cluster/cyano_result*
#TODO - The Tutorial doctests should leave example files after
#running Tests/test_Tutorial.py
Doc/examples/other_trees.nwk
Doc/examples/tree1.nwk
#Ignore LaTeX temp files, and compiled output
Doc/*.aux
Doc/*.log
Doc/*.out
Doc/*.toc
Doc/*.haux
Doc/*.htoc
Doc/*/*.aux
Doc/*/*.log
Doc/*/*.out
Doc/*/*.toc
Doc/*/*.haux
Doc/*/*.htoc
Doc/*/*/*.aux
Doc/*/*/*.log
Doc/*/*/*.out
Doc/*/*/*.toc
Doc/*/*/*.haux
Doc/*/*/*.htoc
Doc/Tutorial.txt
Doc/Tutorial.pdf
Doc/Tutorial.html
Doc/biopdb_faq.pdf
Doc/install/Installation.txt
Doc/install/Installation.pdf
Doc/install/Installation.html
Doc/cookbook/motif/motif.pdf
Doc/cookbook/motif/motif.html
#Ignore the hevea.sty file if present (used for HTML docs)
Doc/hevea.sty
Doc/*/hevea.sty
Doc/*/*/hevea.sty
#Ignore IntelliJ IDEA directory and project files
.idea
*.iml
#Ignore unittest cache dirctory
.cache/
|
