File: test_mmtf_online.py

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# Copyright 2017 by Peter Cock.  All rights reserved.
# This file is part of the Biopython distribution and governed by your
# choice of the "Biopython License Agreement" or the "BSD 3-Clause License".
# Please see the LICENSE file that should have been included as part of this
# package.

import unittest
import warnings

from Bio.PDB.PDBExceptions import PDBConstructionWarning
from Bio.PDB.mmtf import MMTFParser

import requires_internet
requires_internet.check()


class OnlineMMTF(unittest.TestCase):
    """Online tests for the MMTF code."""

    def test_from_url(self):
        """Check parser can fetch a record from its PDB ID."""
        parser = MMTFParser()
        with warnings.catch_warnings():
            warnings.simplefilter('ignore', PDBConstructionWarning)
            struct = parser.get_structure_from_url("4ZHL")
        atoms = [x for x in struct.get_atoms()]
        self.assertEqual(len(atoms), 2080)


if __name__ == "__main__":
    runner = unittest.TextTestRunner(verbosity=2)
    unittest.main(testRunner=runner)