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|
TBLASTX 2.2.26+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: NCBI Transcript Reference Sequences
2,903,055 sequences; 4,626,651,242 total letters
Query= hg19_dna range=chr1:1207057-1207541 5'pad=0 3'pad=0 strand=+
repeatMasking=none
Length=485
Score E
Sequences producing significant alignments: (Bits) Value N
ref|NM_002985.2| Homo sapiens chemokine (C-C motif) ligand 5 (CC... 118 4e-49 2
ref|XM_003255417.1| PREDICTED: Nomascus leucogenys 5'-nucleotida... 197 9e-49 1
ref|XM_003255416.1| PREDICTED: Nomascus leucogenys 5'-nucleotida... 197 9e-49 1
ref|XM_002830485.1| PREDICTED: Pongo abelii uncharacterized prot... 195 3e-48 1
ref|XM_001113556.2| PREDICTED: Macaca mulatta 5'-nucleotidase, c... 195 3e-48 1
ref|XM_001113578.2| PREDICTED: Macaca mulatta 5'-nucleotidase, c... 195 3e-48 1
ref|XM_002805804.1| PREDICTED: Macaca mulatta 5'-nucleotidase, c... 195 3e-48 1
ref|NM_001132349.1| Pongo abelii 5'-nucleotidase, cytosolic II (... 193 1e-47 1
ref|XM_003316602.1| PREDICTED: Pan troglodytes zinc finger prote... 193 2e-47 1
ref|XM_003316601.1| PREDICTED: Pan troglodytes zinc finger prote... 193 2e-47 1
ref|XM_003316600.1| PREDICTED: Pan troglodytes zinc finger prote... 193 2e-47 1
ref|NR_037916.1| Homo sapiens X-linked inhibitor of apoptosis (X... 190 1e-46 1
ref|NM_001204401.1| Homo sapiens X-linked inhibitor of apoptosis... 190 1e-46 1
ref|NM_001167.3| Homo sapiens X-linked inhibitor of apoptosis (X... 190 1e-46 1
ref|NM_014267.5| Homo sapiens chromosome 11 open reading frame 5... 190 2e-46 1
ref|XM_001155268.2| PREDICTED: Pan troglodytes methionine sulfox... 188 4e-46 1
ref|XM_002798565.1| PREDICTED: Macaca mulatta hypothetical prote... 188 5e-46 1
ref|XM_001153818.1| PREDICTED: Pan troglodytes solute carrier fa... 187 1e-45 1
ref|NM_001132553.1| Pongo abelii ATPase, H+ transporting, lysoso... 187 1e-45 1
ref|XM_003280674.1| PREDICTED: Nomascus leucogenys PBX/knotted 1... 186 2e-45 1
>ref|NM_002985.2| Homo sapiens chemokine (C-C motif) ligand 5 (CCL5), mRNA
Length=1237
Score = 118 bits (252), Expect(2) = 4e-49
Identities = 68/107 (64%), Positives = 72/107 (67%), Gaps = 0/107 (0%)
Frame = -3/-1
Query 459 VGPARVQ*HDLSSLQPPAPEFK*FSHLSLQSSWDCRCPPPHPANffffffffFLRRSFAL 280
V A V+ H+LSSLQPP P FK FS LSL SSWD R PP PANF FFFFFF
Sbjct 943 VTQAGVKWHNLSSLQPPPPGFKQFSCLSLPSSWDYRRGPPRPANFCIFFFFFFFETESRS 764
Query 279 VAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVF 139
VAQAGVQW DLG Q PPPGF FSCLS PSSWDYR P NF++
Sbjct 763 VAQAGVQWRDLGSLQAPPPGFTPFSCLSLPSSWDYRRPLPRPANFLY 623
Score = 100 bits (214), Expect(2) = 4e-49
Identities = 37/44 (84%), Positives = 38/44 (86%), Gaps = 0/44 (0%)
Frame = -2/-2
Query 148 FCIFSRDGVLPCWSGWSRTPDLR*SACLGLPKCWDYRCEPPRPA 17
FCIFSRDGV CW GWSRTPDL+*S LGLPKCWDYR EPPRPA
Sbjct 630 FCIFSRDGVSSCWPGWSRTPDLK*STHLGLPKCWDYRREPPRPA 499
Score = 104 bits (222), Expect = 9e-21
Identities = 63/101 (62%), Positives = 75/101 (74%), Gaps = 0/101 (0%)
Frame = +3/+1
Query 144 QN*SGMVACACNPSYSGD*GRRIT*IQEVEAVVGQDQAIALQPGQQERNSVSkkkkkkkk 323
+N* G+VA AC+PSYSG *GRR+ * +E E V +D+A ALQPG+Q KKKKKKK
Sbjct 628 KN*PGVVAGACSPSYSGG*GRRMA*TREAELAVSRDRATALQPGRQSETPSQKKKKKKKY 807
Query 324 kN*PGVVVGTCNPSYSgg*ggRIT*TREPEAVVN*DHVTAL 446
KN*PGVV CNPSYSGG*G +I *T+E EA V+*D T+L
Sbjct 808 KN*PGVVAHACNPSYSGG*GRKIV*TQEVEAAVS*DCATSL 930
>ref|XM_003255417.1| PREDICTED: Nomascus leucogenys 5'-nucleotidase, cytosolic II,
transcript variant 2 (NT5C2), mRNA
Length=3285
Score = 197 bits (425), Expect = 9e-49
Identities = 78/94 (83%), Positives = 79/94 (84%), Gaps = 0/94 (0%)
Frame = -2/-2
Query 298 ETEFRSCCPGWSAMA*SWPTTASTSWIQVILLPQSPE*LGLQAHATMPD*FCIFSRDGVL 119
E EFRSCCPGWSAMA SW S SW+QVIL PQ PE*LGLQA AT P *FCIFSRDGV
Sbjct 3026 EMEFRSCCPGWSAMAQSWLIATSVSWVQVILWPQPPE*LGLQACATTPS*FCIFSRDGVS 2847
Query 118 PCWSGWSRTPDLR*SACLGLPKCWDYRCEPPRPA 17
PCWSGWSRTPDLR*SACLGLPKCWDYR EPP PA
Sbjct 2846 PCWSGWSRTPDLR*SACLGLPKCWDYRREPPCPA 2745
Score = 178 bits (384), Expect = 4e-43
Identities = 77/94 (82%), Positives = 83/94 (88%), Gaps = 0/94 (0%)
Frame = +3/+1
Query 18 AGRGGSHL*SQHFGRPRQADYLRSGVRDQPDQHGKTPSLLKIQN*SGMVACACNPSYSGD 197
AG GGS L*SQHFGRPRQAD+LRSGVRDQPDQHG+TPSLLKIQN* G+VA ACNPSYSG
Sbjct 2746 AGHGGSRL*SQHFGRPRQADHLRSGVRDQPDQHGETPSLLKIQN*LGVVAHACNPSYSGG 2925
Query 198 *GRRIT*IQEVEAVVGQDQAIALQPGQQERNSVS 299
*G+RIT* QE E + QD AIALQPGQQERNS+S
Sbjct 2926 *GQRIT*TQETEVAMSQDCAIALQPGQQERNSIS 3027
Score = 150 bits (322), Expect = 2e-34
Identities = 68/93 (73%), Positives = 73/93 (78%), Gaps = 0/93 (0%)
Frame = +1/+2
Query 22 GVVAHTCNPNTLGGPGRQIT*DRGFETSLTNMVKPRLY*KYKINQAWWHVPVIPATRVTE 201
G VAH NP+TLGG R+IT* R FETSLTNM KP LY*KYKI+ AWW +PVI AT+ E
Sbjct 2750 GTVAHAYNPSTLGGRDRRIT*GREFETSLTNMEKPHLY*KYKISWAWWRMPVILATQEAE 2929
Query 202 AGESLESRRWRLWWAKIKPLHSSLGNKSETPSQ 300
A ESLE RR RL AKI PLHSSLGNKSETPSQ
Sbjct 2930 ARESLEPRRRRLQ*AKIVPLHSSLGNKSETPSQ 3028
>ref|XM_003255416.1| PREDICTED: Nomascus leucogenys 5'-nucleotidase, cytosolic II,
transcript variant 1 (NT5C2), mRNA
Length=3354
Score = 197 bits (425), Expect = 9e-49
Identities = 78/94 (83%), Positives = 79/94 (84%), Gaps = 0/94 (0%)
Frame = -2/-2
Query 298 ETEFRSCCPGWSAMA*SWPTTASTSWIQVILLPQSPE*LGLQAHATMPD*FCIFSRDGVL 119
E EFRSCCPGWSAMA SW S SW+QVIL PQ PE*LGLQA AT P *FCIFSRDGV
Sbjct 3095 EMEFRSCCPGWSAMAQSWLIATSVSWVQVILWPQPPE*LGLQACATTPS*FCIFSRDGVS 2916
Query 118 PCWSGWSRTPDLR*SACLGLPKCWDYRCEPPRPA 17
PCWSGWSRTPDLR*SACLGLPKCWDYR EPP PA
Sbjct 2915 PCWSGWSRTPDLR*SACLGLPKCWDYRREPPCPA 2814
Score = 178 bits (384), Expect = 4e-43
Identities = 77/94 (82%), Positives = 83/94 (88%), Gaps = 0/94 (0%)
Frame = +3/+1
Query 18 AGRGGSHL*SQHFGRPRQADYLRSGVRDQPDQHGKTPSLLKIQN*SGMVACACNPSYSGD 197
AG GGS L*SQHFGRPRQAD+LRSGVRDQPDQHG+TPSLLKIQN* G+VA ACNPSYSG
Sbjct 2815 AGHGGSRL*SQHFGRPRQADHLRSGVRDQPDQHGETPSLLKIQN*LGVVAHACNPSYSGG 2994
Query 198 *GRRIT*IQEVEAVVGQDQAIALQPGQQERNSVS 299
*G+RIT* QE E + QD AIALQPGQQERNS+S
Sbjct 2995 *GQRIT*TQETEVAMSQDCAIALQPGQQERNSIS 3096
Score = 150 bits (322), Expect = 2e-34
Identities = 68/93 (73%), Positives = 73/93 (78%), Gaps = 0/93 (0%)
Frame = +1/+2
Query 22 GVVAHTCNPNTLGGPGRQIT*DRGFETSLTNMVKPRLY*KYKINQAWWHVPVIPATRVTE 201
G VAH NP+TLGG R+IT* R FETSLTNM KP LY*KYKI+ AWW +PVI AT+ E
Sbjct 2819 GTVAHAYNPSTLGGRDRRIT*GREFETSLTNMEKPHLY*KYKISWAWWRMPVILATQEAE 2998
Query 202 AGESLESRRWRLWWAKIKPLHSSLGNKSETPSQ 300
A ESLE RR RL AKI PLHSSLGNKSETPSQ
Sbjct 2999 ARESLEPRRRRLQ*AKIVPLHSSLGNKSETPSQ 3097
>ref|XM_002830485.1| PREDICTED: Pongo abelii uncharacterized protein C20orf177-like
(LOC100448411), mRNA
Length=5081
Score = 195 bits (421), Expect = 3e-48
Identities = 78/94 (83%), Positives = 81/94 (86%), Gaps = 0/94 (0%)
Frame = -2/-1
Query 298 ETEFRSCCPGWSAMA*SWPTTASTSWIQVILLPQSPE*LGLQAHATMPD*FCIFSRDGVL 119
E EFRSCCPGWSAMA SW TT S S +Q ILLPQ+P+*LGLQA AT P *FCIFSRD V
Sbjct 3902 EMEFRSCCPGWSAMARSWLTTTSASRVQAILLPQTPK*LGLQACATTPG*FCIFSRDRVS 3723
Query 118 PCWSGWSRTPDLR*SACLGLPKCWDYRCEPPRPA 17
PCWSGWSRTPDLR*SACLGLPKCWDYR EPPRPA
Sbjct 3722 PCWSGWSRTPDLR*SACLGLPKCWDYRREPPRPA 3621
Score = 176 bits (378), Expect = 3e-42
Identities = 77/94 (82%), Positives = 83/94 (88%), Gaps = 0/94 (0%)
Frame = +3/+1
Query 18 AGRGGSHL*SQHFGRPRQADYLRSGVRDQPDQHGKTPSLLKIQN*SGMVACACNPSYSGD 197
AGRGGS L*SQHFGRPRQAD+LRSGVRDQPDQHG+T SLLKIQN* G+VA ACNPSY G
Sbjct 3622 AGRGGSRL*SQHFGRPRQADHLRSGVRDQPDQHGETLSLLKIQN*PGVVAHACNPSYLGV 3801
Query 198 *GRRIT*IQEVEAVVGQDQAIALQPGQQERNSVS 299
*GRRI * +E E VV QD+AIALQPGQQERNS+S
Sbjct 3802 *GRRIA*TREAEVVVSQDRAIALQPGQQERNSIS 3903
Score = 160 bits (344), Expect = 1e-37
Identities = 69/91 (76%), Positives = 74/91 (81%), Gaps = 0/91 (0%)
Frame = +1/+2
Query 22 GVVAHTCNPNTLGGPGRQIT*DRGFETSLTNMVKPRLY*KYKINQAWWHVPVIPATRVTE 201
GVVAH CNP+TLGG GR+IT* R FETSLTN KP LY*KYKI++ WW +PVIPAT E
Sbjct 3626 GVVAHACNPSTLGGRGRRIT*GREFETSLTNTEKPCLY*KYKISRVWWRMPVIPATWEFE 3805
Query 202 AGESLESRRWRLWWAKIKPLHSSLGNKSETP 294
AGESLE R RLW AKI PLHSSLGNKSETP
Sbjct 3806 AGESLEPGRRRLW*AKIAPLHSSLGNKSETP 3898
>ref|XM_001113556.2| PREDICTED: Macaca mulatta 5'-nucleotidase, cytosolic II, transcript
variant 2 (NT5C2), mRNA
Length=3617
Score = 195 bits (421), Expect = 3e-48
Identities = 77/94 (82%), Positives = 81/94 (86%), Gaps = 0/94 (0%)
Frame = -2/-3
Query 298 ETEFRSCCPGWSAMA*SWPTTASTSWIQVILLPQSPE*LGLQAHATMPD*FCIFSRDGVL 119
E EFRSCCPGWS M *SW TT STSW++VILLPQ PE*LGLQA ATMP *FCIFSR GV
Sbjct 3384 EMEFRSCCPGWSTMV*SWLTTTSTSWVRVILLPQPPE*LGLQACATMPG*FCIFSRHGVS 3205
Query 118 PCWSGWSRTPDLR*SACLGLPKCWDYRCEPPRPA 17
PCWSGWS+TP+LR*S LGLPKCWDYR EPPRPA
Sbjct 3204 PCWSGWSQTPNLR*STRLGLPKCWDYRREPPRPA 3103
Score = 172 bits (371), Expect = 3e-41
Identities = 75/94 (80%), Positives = 79/94 (84%), Gaps = 0/94 (0%)
Frame = +3/+2
Query 18 AGRGGSHL*SQHFGRPRQADYLRSGVRDQPDQHGKTPSLLKIQN*SGMVACACNPSYSGD 197
AGRGGS L*SQHFGRPR+ D+LR GV DQPDQHG+TP LLKIQN* GMVA ACNPSYSG
Sbjct 3104 AGRGGSRL*SQHFGRPRRVDHLRLGV*DQPDQHGETPCLLKIQN*PGMVAHACNPSYSGG 3283
Query 198 *GRRIT*IQEVEAVVGQDQAIALQPGQQERNSVS 299
*GRRIT QEVE VV QD I LQPGQQERNS+S
Sbjct 3284 *GRRITRTQEVEVVVSQDHTIVLQPGQQERNSIS 3385
Score = 168 bits (362), Expect = 5e-40
Identities = 70/93 (75%), Positives = 77/93 (83%), Gaps = 0/93 (0%)
Frame = +1/+3
Query 22 GVVAHTCNPNTLGGPGRQIT*DRGFETSLTNMVKPRLY*KYKINQAWWHVPVIPATRVTE 201
G VAH CNP+T GG G IT* FETSLTNM KP +Y*KYKI++AWW +PVIPAT+V E
Sbjct 3108 GAVAHACNPSTSGGRGGWIT*GWEFETSLTNMEKPHVY*KYKISRAWWRMPVIPATQVAE 3287
Query 202 AGESLESRRWRLWWAKIKPLHSSLGNKSETPSQ 300
AGESLE RRWRLW AKI PL+SSLGNKSETPSQ
Sbjct 3288 AGESLEPRRWRLW*AKITPLYSSLGNKSETPSQ 3386
>ref|XM_001113578.2| PREDICTED: Macaca mulatta 5'-nucleotidase, cytosolic II, transcript
variant 3 (NT5C2), mRNA
Length=3300
Score = 195 bits (421), Expect = 3e-48
Identities = 77/94 (82%), Positives = 81/94 (86%), Gaps = 0/94 (0%)
Frame = -2/-3
Query 298 ETEFRSCCPGWSAMA*SWPTTASTSWIQVILLPQSPE*LGLQAHATMPD*FCIFSRDGVL 119
E EFRSCCPGWS M *SW TT STSW++VILLPQ PE*LGLQA ATMP *FCIFSR GV
Sbjct 3052 EMEFRSCCPGWSTMV*SWLTTTSTSWVRVILLPQPPE*LGLQACATMPG*FCIFSRHGVS 2873
Query 118 PCWSGWSRTPDLR*SACLGLPKCWDYRCEPPRPA 17
PCWSGWS+TP+LR*S LGLPKCWDYR EPPRPA
Sbjct 2872 PCWSGWSQTPNLR*STRLGLPKCWDYRREPPRPA 2771
Score = 172 bits (371), Expect = 3e-41
Identities = 75/94 (80%), Positives = 79/94 (84%), Gaps = 0/94 (0%)
Frame = +3/+3
Query 18 AGRGGSHL*SQHFGRPRQADYLRSGVRDQPDQHGKTPSLLKIQN*SGMVACACNPSYSGD 197
AGRGGS L*SQHFGRPR+ D+LR GV DQPDQHG+TP LLKIQN* GMVA ACNPSYSG
Sbjct 2772 AGRGGSRL*SQHFGRPRRVDHLRLGV*DQPDQHGETPCLLKIQN*PGMVAHACNPSYSGG 2951
Query 198 *GRRIT*IQEVEAVVGQDQAIALQPGQQERNSVS 299
*GRRIT QEVE VV QD I LQPGQQERNS+S
Sbjct 2952 *GRRITRTQEVEVVVSQDHTIVLQPGQQERNSIS 3053
Score = 168 bits (362), Expect = 5e-40
Identities = 70/93 (75%), Positives = 77/93 (83%), Gaps = 0/93 (0%)
Frame = +1/+1
Query 22 GVVAHTCNPNTLGGPGRQIT*DRGFETSLTNMVKPRLY*KYKINQAWWHVPVIPATRVTE 201
G VAH CNP+T GG G IT* FETSLTNM KP +Y*KYKI++AWW +PVIPAT+V E
Sbjct 2776 GAVAHACNPSTSGGRGGWIT*GWEFETSLTNMEKPHVY*KYKISRAWWRMPVIPATQVAE 2955
Query 202 AGESLESRRWRLWWAKIKPLHSSLGNKSETPSQ 300
AGESLE RRWRLW AKI PL+SSLGNKSETPSQ
Sbjct 2956 AGESLEPRRWRLW*AKITPLYSSLGNKSETPSQ 3054
>ref|XM_002805804.1| PREDICTED: Macaca mulatta 5'-nucleotidase, cytosolic II (NT5C2),
mRNA
Length=3393
Score = 195 bits (421), Expect = 3e-48
Identities = 77/94 (82%), Positives = 81/94 (86%), Gaps = 0/94 (0%)
Frame = -2/-3
Query 298 ETEFRSCCPGWSAMA*SWPTTASTSWIQVILLPQSPE*LGLQAHATMPD*FCIFSRDGVL 119
E EFRSCCPGWS M *SW TT STSW++VILLPQ PE*LGLQA ATMP *FCIFSR GV
Sbjct 3160 EMEFRSCCPGWSTMV*SWLTTTSTSWVRVILLPQPPE*LGLQACATMPG*FCIFSRHGVS 2981
Query 118 PCWSGWSRTPDLR*SACLGLPKCWDYRCEPPRPA 17
PCWSGWS+TP+LR*S LGLPKCWDYR EPPRPA
Sbjct 2980 PCWSGWSQTPNLR*STRLGLPKCWDYRREPPRPA 2879
Score = 172 bits (371), Expect = 3e-41
Identities = 75/94 (80%), Positives = 79/94 (84%), Gaps = 0/94 (0%)
Frame = +3/+3
Query 18 AGRGGSHL*SQHFGRPRQADYLRSGVRDQPDQHGKTPSLLKIQN*SGMVACACNPSYSGD 197
AGRGGS L*SQHFGRPR+ D+LR GV DQPDQHG+TP LLKIQN* GMVA ACNPSYSG
Sbjct 2880 AGRGGSRL*SQHFGRPRRVDHLRLGV*DQPDQHGETPCLLKIQN*PGMVAHACNPSYSGG 3059
Query 198 *GRRIT*IQEVEAVVGQDQAIALQPGQQERNSVS 299
*GRRIT QEVE VV QD I LQPGQQERNS+S
Sbjct 3060 *GRRITRTQEVEVVVSQDHTIVLQPGQQERNSIS 3161
Score = 168 bits (362), Expect = 5e-40
Identities = 70/93 (75%), Positives = 77/93 (83%), Gaps = 0/93 (0%)
Frame = +1/+1
Query 22 GVVAHTCNPNTLGGPGRQIT*DRGFETSLTNMVKPRLY*KYKINQAWWHVPVIPATRVTE 201
G VAH CNP+T GG G IT* FETSLTNM KP +Y*KYKI++AWW +PVIPAT+V E
Sbjct 2884 GAVAHACNPSTSGGRGGWIT*GWEFETSLTNMEKPHVY*KYKISRAWWRMPVIPATQVAE 3063
Query 202 AGESLESRRWRLWWAKIKPLHSSLGNKSETPSQ 300
AGESLE RRWRLW AKI PL+SSLGNKSETPSQ
Sbjct 3064 AGESLEPRRWRLW*AKITPLYSSLGNKSETPSQ 3162
>ref|NM_001132349.1| Pongo abelii 5'-nucleotidase, cytosolic II (NT5C2), mRNA
emb|CR859201.1| Pongo abelii mRNA; cDNA DKFZp459F2431 (from clone DKFZp459F2431)
Length=3422
Score = 193 bits (417), Expect = 1e-47
Identities = 76/94 (81%), Positives = 78/94 (83%), Gaps = 0/94 (0%)
Frame = -2/-3
Query 298 ETEFRSCCPGWSAMA*SWPTTASTSWIQVILLPQSPE*LGLQAHATMPD*FCIFSRDGVL 119
E EF SCCPGWSAMA SW T SW+QVILLPQ PE*+GLQA AT P *FCIFSRDGV
Sbjct 3033 EIEFHSCCPGWSAMAQSWLTATCASWVQVILLPQPPE*MGLQACATTPS*FCIFSRDGVS 2854
Query 118 PCWSGWSRTPDLR*SACLGLPKCWDYRCEPPRPA 17
PCW GWSRTPDLR*SACLGLPKCWDYR EPP PA
Sbjct 2853 PCW*GWSRTPDLR*SACLGLPKCWDYRREPPCPA 2752
Score = 169 bits (364), Expect = 2e-40
Identities = 75/94 (80%), Positives = 80/94 (85%), Gaps = 0/94 (0%)
Frame = +3/+2
Query 18 AGRGGSHL*SQHFGRPRQADYLRSGVRDQPDQHGKTPSLLKIQN*SGMVACACNPSYSGD 197
AG GGS L*SQHFGRPRQAD+LRSGVRDQP QHG+TPSLLKIQN* G+VA ACNP YSG
Sbjct 2753 AGHGGSRL*SQHFGRPRQADHLRSGVRDQPYQHGETPSLLKIQN*LGVVAHACNPIYSGG 2932
Query 198 *GRRIT*IQEVEAVVGQDQAIALQPGQQERNSVS 299
*GRRIT* QE + V QD AIALQPGQQE NS+S
Sbjct 2933 *GRRIT*TQEAQVAVSQDCAIALQPGQQE*NSIS 3034
Score = 159 bits (342), Expect = 3e-37
Identities = 70/94 (74%), Positives = 75/94 (80%), Gaps = 0/94 (0%)
Frame = +1/+3
Query 19 LGVVAHTCNPNTLGGPGRQIT*DRGFETSLTNMVKPRLY*KYKINQAWWHVPVIPATRVT 198
LG VAH CNP+TLGG RQI * R FETSLTNM KP LY*KYKI+ AWW +PVIP+T+
Sbjct 2754 LGTVAHACNPSTLGGRDRQII*GREFETSLTNMEKPHLY*KYKISWAWWRMPVIPSTQEA 2933
Query 199 EAGESLESRRWRLWWAKIKPLHSSLGNKSETPSQ 300
EAGESLE RR RL AKI PLHSSLGNKSET SQ
Sbjct 2934 EAGESLEPRRRRLQSAKIAPLHSSLGNKSETLSQ 3035
>ref|XM_003316602.1| PREDICTED: Pan troglodytes zinc finger protein 160, transcript
variant 3 (ZNF160), mRNA
Length=5308
Score = 193 bits (415), Expect = 2e-47
Identities = 75/94 (80%), Positives = 78/94 (83%), Gaps = 0/94 (0%)
Frame = -2/-3
Query 292 EFRSCCPGWSAMA*SWPTTASTSWIQVILLPQSPE*LGLQAHATMPD*FCIFSRDGVLPC 113
EF SCCPGWSA+A*SW TT S SW+Q LLPQ P+*LGLQA AT P *FCIFS DGV PC
Sbjct 4112 EFCSCCPGWSAVA*SWLTTTSASWVQATLLPQPPK*LGLQAPATTPG*FCIFSTDGVSPC 3933
Query 112 WSGWSRTPDLR*SACLGLPKCWDYRCEPPRPAPL 11
WSGWSRTPDLR*S CL LPKCWDYRCEPPR A L
Sbjct 3932 WSGWSRTPDLR*STCLSLPKCWDYRCEPPRLASL 3831
Score = 171 bits (368), Expect = 7e-41
Identities = 73/98 (74%), Positives = 82/98 (84%), Gaps = 0/98 (0%)
Frame = +3/+1
Query 3 KIHKGAGRGGSHL*SQHFGRPRQADYLRSGVRDQPDQHGKTPSLLKIQN*SGMVACACNP 182
K+ + A RGGSHL*SQHFGR RQ D+LRSGVRDQPDQHG+TPS+LKIQN* G+VA ACNP
Sbjct 3823 KLKREARRGGSHL*SQHFGRLRQVDHLRSGVRDQPDQHGETPSVLKIQN*PGVVAGACNP 4002
Query 183 SYSGD*GRRIT*IQEVEAVVGQDQAIALQPGQQERNSV 296
SY G *GRR+ * QE E VV QD A ALQPGQQE+NS+
Sbjct 4003 SYLGG*GRRVA*TQEAEVVVSQDHATALQPGQQEQNSI 4116
Score = 166 bits (357), Expect = 2e-39
Identities = 71/93 (76%), Positives = 77/93 (83%), Gaps = 0/93 (0%)
Frame = +1/+2
Query 22 GVVAHTCNPNTLGGPGRQIT*DRGFETSLTNMVKPRLY*KYKINQAWWHVPVIPATRVTE 201
G VAHTCNP+TLGG GR IT* R FETSLTNM KP LY*KYKI++AWW VPVIPAT E
Sbjct 3842 GAVAHTCNPSTLGG*GRWIT*GREFETSLTNMEKPHLY*KYKISRAWWQVPVIPATWEAE 4021
Query 202 AGESLESRRWRLWWAKIKPLHSSLGNKSETPSQ 300
AGE LE RR RLW AKI PLHSSLGNK++TPS+
Sbjct 4022 AGELLEPRRRRLW*AKIMPLHSSLGNKNKTPSK 4120
>ref|XM_003316601.1| PREDICTED: Pan troglodytes zinc finger protein 160, transcript
variant 2 (ZNF160), mRNA
Length=5398
Score = 193 bits (415), Expect = 2e-47
Identities = 75/94 (80%), Positives = 78/94 (83%), Gaps = 0/94 (0%)
Frame = -2/-3
Query 292 EFRSCCPGWSAMA*SWPTTASTSWIQVILLPQSPE*LGLQAHATMPD*FCIFSRDGVLPC 113
EF SCCPGWSA+A*SW TT S SW+Q LLPQ P+*LGLQA AT P *FCIFS DGV PC
Sbjct 4202 EFCSCCPGWSAVA*SWLTTTSASWVQATLLPQPPK*LGLQAPATTPG*FCIFSTDGVSPC 4023
Query 112 WSGWSRTPDLR*SACLGLPKCWDYRCEPPRPAPL 11
WSGWSRTPDLR*S CL LPKCWDYRCEPPR A L
Sbjct 4022 WSGWSRTPDLR*STCLSLPKCWDYRCEPPRLASL 3921
Lambda K H
0.318 0.134 0.401
Effective search space used: 146550199830
Database: NCBI Transcript Reference Sequences
Posted date: Mar 1, 2012 8:32 PM
Number of letters in database: 4,626,651,242
Number of sequences in database: 2,903,055
Matrix: BLOSUM62
Neighboring words threshold: 13
Window for multiple hits: 40
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