File: probcons.aln

package info (click to toggle)
python-biopython 1.80%2Bdfsg-4
  • links: PTS, VCS
  • area: main
  • in suites: bookworm
  • size: 76,328 kB
  • sloc: python: 316,117; xml: 178,845; ansic: 14,577; sql: 1,208; makefile: 131; sh: 70
file content (15 lines) | stat: -rw-r--r-- 838 bytes parent folder | download | duplicates (2) 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
 
PROBCONS version 1.12 multiple sequence alignment

plas_horvu    D-VLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSG-VD-VSKISQE
plas_chlre    --VKLGADSGALEFVPKTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSG-VN-ADAISRD
plas_anava    --VKLGSDKGLLVFEPAKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHK
plas_proho    VQIKMGTDKYAPLYEPKALSISAGDTVEFVMNKVGPHNVIFDK--VPAG-ES-APALSNT
azup_achcy    VHMLNKGKDGAMVFEPASLKVAPGDTVTFIPTDK-GHNVETIKGMIPDG-AE-A------
               ::    .     : *  :.: .*:*: *  .    **:       *    . .  :*. 

plas_horvu    EYLTAPGETFSVTLTV---PGTYGFYCEPHAGAGMVGKVTV
plas_chlre    DYLNAPGETYSVKLTA---AGEYGYYCEPHQGAGMVGKIIV
plas_anava    QLLMSPGQSTSTTFPADAPAGEYTFYCEPHRGAGMVGKITV
plas_proho    KLRIAPGSFYSVTLGT---PGTYSFYCTPHRGAGMVGTITV
azup_achcy    -FKSKINENYKVTFTA---PGVYGVKCTPHYGMGMVGVVEV
              .     ..  ...: .   .* *   * ** * **** : *