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hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: antismash/specific_modules/lantipeptides/ClassIVLanti.hmm
Sequence file: -
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Query sequence: small_input
Accession: [none]
Description: [none]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
ClassIVLanti Class-IV -79.3 1 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
ClassIVLanti 1/1 6 20 .. 1 66 [] -79.3 1
Alignments of top-scoring domains:
ClassIVLanti: domain 1 of 1, from 6 to 20: score -79.3, E = 1
*->msEEqLKAFiAKvqaDtsLqEqLKaEGADvvaiAKAaGFtitteDLn
F+ G +t Ln
small_inpu 6 -------CFL---------------------------GCLVTNWVLN 18
ahiqakeLsdeeLEgvaGg<-*
small_inpu 19 RS----------------- 20
//
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